Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314355.1_202015-10- 14] 2,768 sequences; 40,329,992 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq492 95.1 9e-15 >seq492 Length=38611 Score = 95.1 bits (104), Expect = 9e-15 Identities = 183/270 (68%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 101638 AAGTGTTGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATC 101697 ||| ||||| |||| | |||||| || || |||||| ||| ||| | |||| ||| | Sbjct 26333 AAGCGTTGGGAACGCGCGAGGAGTACGTGTTAACTGCTTTTGAAGCGGCTCAACGTGGTT 26274 Query 101698 TACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGAC 101757 | ||| | || ||||| || || ||||| |||||| |||||| || || || Sbjct 26273 CAGATACACATGCGCATCGCCAATGACATGGACAAACTCGCCAGGCTTCAGCCCAGCCAC 26214 Query 101758 ATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCC 101817 || || | || | || | || | || || || ||||| ||||||||||| | || Sbjct 26213 TTGCGCCACCAGTCGTGTAAGCAGTGCGTAACTGGCGATGTTGAATGGCACTCCAAGTCC 26154 Query 101818 CATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTG 101877 ||| || || || | ||| |||| || ||||| | || |||||| || || || || Sbjct 26153 CATGTCGGCCGAACGTTGGTACATCTGGCAGGACAACTCCCCATCAGCCACGTAGAACTG 26094 Query 101878 ACTTAATACATGACAAGGCGGCAACACCAT 101907 | || | || || || |||||| |||| Sbjct 26093 GCAGAACATGTGGCAGGGAGGCAACGCCAT 26064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361239013190768