Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314355.1_202015-10- 14] 2,768 sequences; 40,329,992 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq492 113 4e-20 >seq492 Length=38611 Score = 113 bits (124), Expect = 4e-20 Identities = 213/311 (68%), Gaps = 12/311 (4%) Strand=Plus/Plus Query 20341 ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400 ||||| |||| ||| | |||||| | || | || |||||| || ||| ||| | Sbjct 26004 ACGAATCCAACTGACCGCAGAATTGTGTTGTCGGCGTGGAACCCTGCTGAT----CTTAA 26059 Query 20401 ----ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATT 20456 ||||| |||||||| || || ||| | ||||| || ||||| ||| || || || Sbjct 26060 CGAGATGGCGTTGCCTCCCTGCCACATGTTCTGCCAGTTCTACGTGGCTGATGGGGAGTT 26119 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||| || || ||||| ||||| || || || |||||||| || || || ||||| || || Sbjct 26120 GTCCTGCCAGATGTACCAACGTTCGGCCGACATGGGACTTGGAGTGCCATTCAACATCGC 26179 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 ||||| || |||||||| || | || || || | | | || | || || || Sbjct 26180 CAGTTACGCACTGCTTACACGACTGGTGGCGCAAGTGGCTGGGCTGAAGCCTGGCGAGTT 26239 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC--TTTAAAATTA 20634 ||||| ||| || || |||||| | || || || || | || || || |||| Sbjct 26240 TGTCCATGTCATTGGCGATGCGCATGTGTATCTGAACCACGTTGAGCCGCTTCAAAAG-- 26297 Query 20635 CAGTTAACACG 20645 ||||||||||| Sbjct 26298 CAGTTAACACG 26308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399170533527760