Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314355.1_202015-10- 14] 2,768 sequences; 40,329,992 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq416 89.7 2e-13 >seq416 Length=27048 Score = 89.7 bits (98), Expect = 2e-13 Identities = 189/275 (69%), Gaps = 8/275 (3%) Strand=Plus/Plus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||||||| | || | ||||||||| |||| ||||| | || | | | | Sbjct 11156 CCATGCACATGTGGCTGGCTTCAATGACCACGGCGACTCCCTTAGGCTCAATGACGCCCA 11215 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCG--GCGAGCATA 31122 | |||| |||||||| | || || | |||||||| ||||| || |||| | | Sbjct 11216 TAATGGCGTTGGCGATCTGCTTCGTCAGTCTCTCCTGCACCTGCAGTCGTCTCGAGAAGA 11275 Query 31123 CATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCT 31182 | | | | | | || |||||| || ||||||| | || || || ||||||| Sbjct 11276 CCTCACTG--ACTCTGGCCAGCTTACTGAGGCCCAGCACCTTCCCATTAGGGATGTAGCC 11333 Query 31183 GATCGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCA-ATGTGAGTAGATGGGG 31240 ||| ||| ||| | || || |||| | | ||| |||||||| ||| ||||| | | | Sbjct 11334 GAT-GTGCACCTTACCATTGAACGGCACCATGTGGTGCTCGCACATG-GAGTACAGGTCG 11391 Query 31241 ATGTCGCGCACCGTCACCATCTGGTCATGCTTCTC 31275 ||||| ||||| | ||||||| |||||| | ||| Sbjct 11392 ATGTCCCGCACGATGACCATCTCGTCATGGTCCTC 11426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187283443790848