Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001482985.1_202015-12- 29] 5,317 sequences; 71,413,976 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq507 141 2e-28 seq126 125 2e-23 seq1687 113 1e-19 seq1058 113 1e-19 seq2995 91.5 3e-13 seq2816 91.5 3e-13 seq2754 91.5 3e-13 seq2031 91.5 3e-13 seq601 87.8 4e-12 seq101 86.0 1e-11 >seq507 Length=28664 Score = 141 bits (156), Expect = 2e-28 Identities = 453/696 (65%), Gaps = 34/696 (5%) Strand=Plus/Minus Query 318990 CTCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAG 319049 ||| ||||| ||||| || ||||||| ||||| |||||||||| ||| ||||| Sbjct 16723 CTCCTTGTCCTCACCAGACTGGAAACGCCACTGGATGTACTGGTTGGCAGTCTCATCAAG 16664 Query 319050 ATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATG 319109 || ||| |||||||||||||| ||||| || ||||| || | |||||| || || Sbjct 16663 GTGCGACTCAATGTGGTGGAAAGCGTGCTGAGCGACGTAGGCGAAACGCATGGAAGGGTG 16604 Query 319110 CTTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCT 319169 |||||| || ||| |||| | |||| || ||||| |||| ||| || || || Sbjct 16603 CTTCCACACCTGACCACTGGTCGGCTCCACTTCACCCGTCAGCATCTTGATCAGCGTAGA 16544 Query 319170 TTTCCCCGCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATT 319229 || || |||||||| |||| |||| |||| | | ||| | | ||| Sbjct 16543 CTTACCGGCACCGTTGGGTCCCAGCACAGCGATACGG------CTCGAAA---GAGCA-- 16495 Query 319230 CACGTTGTCAAAGAT-TAGTT----------TTTCCGTACCCGGATACTTGAACCCCACA 319278 |||| | || |||| | ||| || | |||||| |||| | | | ||| Sbjct 16494 CACG-TCACAGAGATGTTGTTGATCGACGGCTTGGGGCACCCGGGTACTGGTA-CGAACA 16437 Query 319279 CCGCGT-AGCTTCATGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTC 319337 || || ||||||| |||| |||| | | ||||| || ||||| Sbjct 16436 GTTGGTCAGACGAATGATGGGCTTACCCTTGTTCTTGATGTCAGCAAGGAAACCAGGCTC 16377 Query 319338 GGGGAACTTCCACGT---GGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGG 319394 |||||| | || | | ||| || |||| || ||||||| | | || || Sbjct 16376 GGGGAAGATGAACTTGACGTTCTCCGACTCG---AGCTCGTAGTAGGCCTTGGCCTCAGG 16320 Query 319395 ACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTC 319454 || || |||||||| ||| || || |||||||| |||||||||| || | || Sbjct 16319 CTTCTGCTCCACGAACTTGGAGAGGTTACCCTTGTAGATCTTCAGCTTACGG---GTCTC 16263 Query 319455 GTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCAC 319514 ||| || || || ||| || || ||||||||| || |||||||| ||||| || | Sbjct 16262 GTAGTGAATGATGTTGGTACACACGTTGTCGAGGAAGCCAGAGTCGTGCGACACCATGAT 16203 Query 319515 GCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGA 319574 | | | |||| | ||| | ||||||| | || ||| ||||| ||| Sbjct 16202 GGAAGTCACGTTCGGCAGGCTCGTCAGGTAGTTCTCCAGCCAGGCAACGTTCTTGACATC 16143 Query 319575 AAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGC 319634 | ||||| || ||||| ||||||||||| | | || ||| | | ||| ||||| || Sbjct 16142 CAAGTGGTTCGTGGGCTCATCAAGAAGCAGGATGTCGGCCTTCTGCAACATGGCACGAGC 16083 Query 319635 AAGAGCGAGTTTCATTTTCCACCCTCCGGAAAGAGT 319670 || | |||||||| ||||| || || ||||| || Sbjct 16082 CAGCTCCAGTTTCATCTTCCAACCACCCGAAAGGGT 16047 Score = 100 bits (110), Expect = 6e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || |||||||||||||| || || ||||||||||| || ||||| || Sbjct 15866 GGGGAATCCCTCAAGCTGGCCGTTGGAGATGGCACGCATCAGGGTCGACTTACCACAACC 15807 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || || ||||||||||| |||| || || || ||| | || | ||||||||| Sbjct 15806 GTTGGGACCGCACAGACCGTAACGGTGACCACGCTTAAGGCGAAGACGAGCGTTGTTCAG 15747 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATC 320024 ||||| | ||||| || || || || || || || | ||||| || Sbjct 15746 CAGAATCATACCACCGTAAGCAAGCGAGAACTCGCAGTTGCACAGGTC 15699 >seq126 Length=136461 Score = 125 bits (138), Expect = 2e-23 Identities = 558/867 (64%), Gaps = 30/867 (3%) Strand=Plus/Plus Query 229758 GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTG 229817 |||||| || || | | ||| ||||| | ||||||||||| || | ||| | ||||| Sbjct 10307 GTTCCCCATTCAGGAACACGAAGTGTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTCTG 10366 Query 229818 GACCACTGAGGAAGTTCCTCTGAACGCA-GACGTCGTCGACTGGCGTGAGAAACTCAATG 229876 ||| ||||||| | || | ||| ||| || |||||| | || |||| | Sbjct 10367 GACGGCTGAGGA-GCTCGACCTTGTGCACGACCTCAAGGACTGGAGCAAG---CTCACGG 10422 Query 229877 ACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTG 229936 || |||| || || |||||||| ||| | || | || ||||||| | || ||||| | Sbjct 10423 ACAACGAGCGACACTTCATCAAGCACGTGCTCGCCTTCTTCGCAGCCAGTGACGGTATCG 10482 Query 229937 TGATGGAAAATCTGCAGACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAAT 229996 ||| || || || | ||||| || ||||| ||| || ||||| || | Sbjct 10483 TGAACGAGAACTTGGCCATGAACTTCAGCAACGAAGTGCAGGTGCCCGAGGCTCGTTGCT 10542 Query 229997 TTTATGCTTACCAAA----CATTCAACGAATCTATCCATTCTGAACAATATGCTCTGCTT 230052 | |||| | ||| | |||| | ||| || || || || || | ||||| Sbjct 10543 TCTATGGCTTCCAGATCGCCATTGA--GAAC--ATTCACTCGGAGGTCTACTCACTGCTC 10598 Query 230053 ATCGACGCGCTTATTTCCGACGAG--CAAGAACGGAACGAGCTTTTTGATGCCATTGAAA 230110 || ||| || || |||| | | |||| | || | || | ||||||||| | Sbjct 10599 ATTGACACGTACATCAAGGACGCGATCGAGAAGG--ACCATCTCCTGCGTGCCATTGAGA 10656 Query 230111 ACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACCTGGTAAAT 230170 |||||| || || ||||| | ||||| | || ||| || || || || Sbjct 10657 CCATCCCTTGTGTCACGAAGAAGGCTCACTGGGCACTCAAGTGGTGCGACCCGCGTGTAT 10716 Query 230171 CGTT-TGCC--GAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGA 230227 | | | || ||||| || | || | | ||| ||||| || | || || || Sbjct 10717 CCTCCTACCCGGAGCGCCTGCTGGCTTTCGCTGCTGTGGAAGGCATCTTCTTCTCGGGCT 10776 Query 230228 GTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 ||||||| ||||||||||||| ||| || | ||||| || || | | || | Sbjct 10777 CTTTCTGCTCCATCTTTTGGCTAAAGAAGCGCGGCCTCATGCCCGGTCTGAGCTTCTCGA 10836 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| |||||||||| |||||||| | || | |||| | ||| |||| || | Sbjct 10837 ACGAGCTCATCAGTCGTGACGAGGGCATGCACACGGACTTCGCCTGCCTTTTGTACTCCA 10896 Query 230348 AGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAA-ATCATTACAGAAGCAGTTGAA 230406 |||| | |||||| ||| ||| || | || | |||||| || || || | Sbjct 10897 AGCTGGTCACCAAGCTGCCAGA-GAGCCGTGTACACGAGATCATTCGTGACGCTGTGGTG 10955 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGA 230465 | || | ||||| | ||||| | | || ||| | || ||||| |||||| ||| Sbjct 10956 ATTGAGCACGAGTTTGTGCGTGACTCGCTCCC-TGTGGAGCTGATTGGTATGAACTCTGC 11014 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGT---TA 230522 || ||| | |||||||| || ||||| || ||||| | | | |||||| | Sbjct 11015 CCTCATGTGCCAGTACATTGAGTTCGTGGCTGACCGTCTGCTCTACTCGCTTGGTGTGTC 11074 Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582 | ||| | ||| || |||||||||| |||| | ||||| | || || || ||||| Sbjct 11075 CAAGA---TCTACCACGCTAAGAACCCTTTTGACTGGATGGACATGATCTCTCTCCAAGG 11131 Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGT 230609 ||||||||||| ||||| |||||||| Sbjct 11132 CAAGACCAACTTTTTCGAGAAGCGTGT 11158 >seq1687 Length=9451 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 1289 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 1230 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1229 CCCACGGTGGGC 1218 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 2409 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 2350 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2349 CCCACGGTGGGC 2338 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 4101 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 4042 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4041 CCCACGGTGGGC 4030 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 4666 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 4607 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4606 CCCACGGTGGGC 4595 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 5788 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 5729 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5728 CCCACGGTGGGC 5717 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 6354 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 6295 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6294 CCCACGGTGGGC 6283 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 7481 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 7422 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7421 CCCACGGTGGGC 7410 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 8046 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 7987 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7986 CCCACGGTGGGC 7975 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 9176 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 9117 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9116 CCCACGGTGGGC 9105 Score = 109 bits (120), Expect = 1e-18 Identities = 66/70 (94%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 720 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 661 Query 165770 CCCACGATGG 165779 |||||| ||| Sbjct 660 CCCACGGTGG 651 Score = 109 bits (120), Expect = 1e-18 Identities = 66/70 (94%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 8611 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 8552 Query 165770 CCCACGATGG 165779 |||||| ||| Sbjct 8551 CCCACGGTGG 8542 Score = 104 bits (114), Expect = 5e-17 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct 160 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG- 102 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 101 CCCACGGTGGGC 90 Score = 104 bits (114), Expect = 5e-17 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||| Sbjct 1853 GCCCGTCTAGCTCAGTCG-TAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 1795 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1794 CCCACGGTGGGC 1783 Score = 104 bits (114), Expect = 5e-17 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct 2973 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG- 2915 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2914 CCCACGGTGGGC 2903 Score = 104 bits (114), Expect = 5e-17 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||| Sbjct 3535 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGT-GGTTCGAGC 3477 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3476 CCCACGGTGGGC 3465 Score = 104 bits (114), Expect = 5e-17 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||| Sbjct 5227 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGT-GGTTCGAGC 5169 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5168 CCCACGGTGGGC 5157 Score = 95.1 bits (104), Expect = 3e-14 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||| |||||||||| Sbjct 6916 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTC--GGGTTCGAGC 6859 Query 165770 CCCACG 165775 |||||| Sbjct 6858 CCCACG 6853 >seq1058 Length=15310 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 4718 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 4777 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4778 CCCACGGTGGGC 4789 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 5285 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 5344 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5345 CCCACGGTGGGC 5356 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 5853 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 5912 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5913 CCCACGGTGGGC 5924 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 6986 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 7045 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7046 CCCACGGTGGGC 7057 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 7551 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 7610 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7611 CCCACGGTGGGC 7622 Score = 104 bits (114), Expect = 5e-17 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct 6420 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG- 6478 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6479 CCCACGGTGGGC 6490 >seq2995 Length=4973 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 1038 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 979 Query 165771 CCACG 165775 ||||| Sbjct 978 CCACG 974 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 2544 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 2485 Query 165771 CCACG 165775 ||||| Sbjct 2484 CCACG 2480 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 4057 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 3998 Query 165771 CCACG 165775 ||||| Sbjct 3997 CCACG 3993 >seq2816 Length=5310 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 1517 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 1576 Query 165771 CCACG 165775 ||||| Sbjct 1577 CCACG 1581 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 3050 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 3109 Query 165771 CCACG 165775 ||||| Sbjct 3110 CCACG 3114 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 4538 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 4597 Query 165771 CCACG 165775 ||||| Sbjct 4598 CCACG 4602 >seq2754 Length=5423 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 2109 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 2050 Query 165771 CCACG 165775 ||||| Sbjct 2049 CCACG 2045 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 3639 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 3580 Query 165771 CCACG 165775 ||||| Sbjct 3579 CCACG 3575 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 ||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||| Sbjct 5168 CCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCCC 5109 Query 165772 CACG 165775 |||| Sbjct 5108 CACG 5105 >seq2031 Length=7438 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 2896 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 2837 Query 165771 CCACG 165775 ||||| Sbjct 2836 CCACG 2832 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 4390 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 4331 Query 165771 CCACG 165775 ||||| Sbjct 4330 CCACG 4326 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 5896 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 5837 Query 165771 CCACG 165775 ||||| Sbjct 5836 CCACG 5832 >seq601 Length=25350 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 281736 AGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCA 281795 || || ||||| ||||| | ||||| || ||||||||||||| ||| | || || Sbjct 13456 AGGTTGGTGAAAATATAACGAGCACTGGCCGAGTCTTTACCACCCATCAGACGCGTACCG 13515 Query 281796 AACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGG 281855 |||||||| ||| ||| || ||||| ||||| || ||| | ||||| |||| Sbjct 13516 AACTGACCAATCGGGGACAGTAGGTGGATGTTGTTGCTGCCAACGAAGTCCTGCGCCATA 13575 Query 281856 TTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACA 281915 || ||||| ||||| || | ||||||||| || ||||| ||| || | || Sbjct 13576 TTCACGATACAGCCCTGTAGACTTTGCTCACCGTGATGGTAGGCAGAGTGCTCAGACACG 13635 Query 281916 TAACCACTGAACTGTGCTACCTT 281938 || ||| |||||||| ||||| Sbjct 13636 TAGCCAGCCAACTGTGCCACCTT 13658 >seq101 Length=123959 Score = 86.0 bits (94), Expect = 1e-11 Identities = 198/291 (68%), Gaps = 12/291 (4%) Strand=Plus/Minus Query 281735 CAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCC 281794 |||| |||||||||||| | | ||| || ||| |||||||| ||||| | | || Sbjct 88881 CAGTAACGTGAAGATATATCGAGGACTAGCAGCGTCCTTACCACCTTGCAGTCGAGTACC 88822 Query 281795 AAACTGACCCTCCGGCAACA--ACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCC 281852 ||| ||||| ||| ||| | | | | ||||||| ||| ||| | ||||| ||| Sbjct 88821 AAATTGACCTGACGGGTACAGTAGCGGC--AGGTTATTGGACCCCACGAAGTCCTGCGCC 88764 Query 281853 AGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCA 281912 | |||||| || ||| || | ||| | || ||||||||||| || |||| || | Sbjct 88763 ATGTTGACAATCGTCGAGTGTAACGAGGCTTCTCCGTGGTGATAAGCTGTGTGCTC-ACT 88705 Query 281913 ACA-TAACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGA---AAGC 281968 || |||||| | ||| || |||||||| || || | |||||||| | |||| Sbjct 88704 GCAGTAACCAGCCAGCTGAGCCACCTTCACTTCACTCGTAAGCTTGCGTTTTAAACAAGC 88645 Query 281969 GCAATATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGG 282019 | || | | || || || || || ||||| |||||| || || || || Sbjct 88644 G-AACAGA--ACCTTCCGCTGCGAGATCTTGAGACCATCGACCACCGATGG 88597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057751936731710