Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001482985.1_202015-12- 29] 5,317 sequences; 71,413,976 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq111 107 2e-18 >seq111 Length=87890 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || || || |||| ||| || ||||| |||||||| ||||| |||||||| Sbjct 66184 ATGGCCCTGCCGCCTTGCCACATGTTCTGCCAGTTCTACGTTGCCAACGGGGAATTATCG 66243 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 || || | |||||| |||||| || ||||| ||||| || || ||||||||||| | Sbjct 66244 TGTCAGATGTACCAGCGATCGGCCGACATGGGTCTTGGAGTGCCTTTCAACATTGCCAGC 66303 Query 19092 TATGCACTTCTTAC-CTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAAT 19150 || || || || || | || | || || || || || ||||| ||| | || || || || Sbjct 66304 TACGCGCTGCTGACACGAC-TGGTTGCACAAGTGACGGGACTAAAACCTGGCGAGTTCAT 66362 Query 19151 TCA 19153 || Sbjct 66363 CCA 66365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399478111766265