Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001482985.1_202015-12- 29] 5,317 sequences; 71,413,976 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq53 87.8 1e-12 >seq53 Length=192998 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 108390 CTACAAGGCCACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACA 108449 ||||||||||| ||| | | |||||||| ||| ||| |||| |||| | Sbjct 71626 CTACAAGGCCAAACTGCCGCTGCGTGTGTTCCTCATGCTCTGCAACTCGATGGCCTTCGA 71567 Query 108450 GAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGAC 108509 | ||||||| ||||| || || ||| | || ||||||||| ||| |||||||| Sbjct 71566 GGGCACCATCTTCGAGTGGTCGCGTGACCACCGCGTGCACCACAAGGGCTCGGACACGAC 71507 Query 108510 GGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 ||| ||||| |||||| | | | ||| ||| ||||||||| |||| ||| ||||| | Sbjct 71506 GGCTGACCCGCACAACTCGGAGCGCGGGCTCTTCTTCTCGCACATGGGCTGGGTCATGGT 71447 Query 108570 G 108570 | Sbjct 71446 G 71446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381748060764648