Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001482985.1_202015-12- 29] 5,317 sequences; 71,413,976 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq40 161 3e-34 seq135 132 1e-25 seq2103 120 9e-22 seq290 116 1e-20 seq188 105 2e-17 seq1199 93.3 1e-13 seq230 93.3 1e-13 seq42 93.3 1e-13 seq4690 89.7 2e-12 seq4274 89.7 2e-12 seq98 89.7 2e-12 >seq40 Length=98188 Score = 161 bits (178), Expect = 3e-34 Identities = 942/1485 (63%), Gaps = 44/1485 (3%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | || || || || || || || | || ||||| || || || || || Sbjct 17605 GGCATTGATCTGGGCACGACCTACTCGTGCGTCGGCGTGTGGCAGAACGACCGCGTGGAG 17546 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || ||||| || || || || ||| | || || || || ||||| || || ||||| || Sbjct 17545 ATCATTGCCAACGACCAGGGCAACCGCACGACCCCGTCGTACGTGGCGTTCACCGACACG 17486 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 |||||| | || || ||| |||| || || || | ||| || || | || ||||| Sbjct 17485 GAGCGTCTTATCGGCGATGCTGCCAAGAACCAGGTGGCTATGAACGCACACAACACGGTG 17426 Query 349385 TTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA----CAATCTG 349439 ||||||| ||||| | || || | ||||| || ||| | | || || | Sbjct 17425 TTTGATGTCAAGCGGTTGATCGGGCGCAAGTTC-----ACCGATCCAGAAGTGCAGTCGG 17371 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 | | || || | || || | || |||| | | | ||||| | | || Sbjct 17370 ACATCAAGCACTGGCCGTTCAAGGTAGTTCGTGGTGCTGAGAACAAACCTCAACTGGTGG 17311 Query 349500 TTGAATATAAAGGTGAA-CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 | | | || || || | || || || ||| || || ||||| || ||||| || Sbjct 17310 TGCAGTTCAAGGGCGAGTCGAAGACG-TTCCAACCGGAGGAGATTTCGTCTATGGTGTTG 17252 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACA-GTAACTGATGCTGTTAT 349617 | || ||| || | || || |||| | || ||||| || | | || || | Sbjct 17251 ATCAAGATGCGAGAGGTGGCCGAGGCATTCATTGGC-AAACATGTGAAGAACGCGGTGGT 17193 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC-A 349676 || || || ||||| || || || | ||||| || || |||||||| || ||| | Sbjct 17192 GACGGTCCCGGCCTACTTCAACGACTCGCAGCGCCAAGCGACTAAAGATGCGGG-AGCTA 17134 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 |||| || || ||||| || | || || || || || || || || || || || |||| Sbjct 17133 TTGCTGGTTTGAATGTGCTGCGTATCATCAACGAGCCGACGGCCGCTGCGATCGCCTATG 17074 Query 349737 GGCTTGATAA--AATGAG-TGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793 |||| || || || ||| ||| || || | || || || ||| | || || | Sbjct 17073 GGCTGGACAAGAAAGGAGGTGAGCAC------AACGTGCTGATCTTCGATCTCGGCGGCG 17020 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTG 349853 | || || ||||| || || || || ||||||| || || || || || || || || | Sbjct 17019 GAACGTTCGATGTCTCTCTGCTCACTATTGAAGAAGGCATCTTCGAGGTCAAGGCGACAG 16960 Query 349854 CTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTA 349913 | ||||| || || | || || || || || || || ||||| || | |||| || Sbjct 16959 CGGGTGACACGCACTTGGGAGGTGAGGACTTCGACAACCGTCTGGTCGAGTATTTCGTAC 16900 Query 349914 AAGAATTTAAGCGTCAAGCTAAA--ATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 | ||||| ||||| |||| || | ||||| || || | | || ||||||| Sbjct 16899 AGGAATTCAAGCG-CAAG-TACCGCAAGGATATGACAGTGAACCAGCGTGCGCTGCGTCG 16842 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 ||| | || ||||| ||||| || ||||| | || || || | | || | | | Sbjct 16841 CCTGCGTACGGCGTGCGAACGCGCCAAGCGGACGTTGTCTACTTCGGCGCAGGCGTACCT 16782 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| ||||| || || ||||| | |||||| || | || || ||||| ||||| Sbjct 16781 TGAGATTGACTCGCTACTGGATGGTATCGATTTCAACTCGACCATCACGCGTGCGCGGTT 16722 Query 350092 TGAAGAATTATGTATGGATCTTTTTAGAGCA--ACAATGGATCCTGTGGAAAAAGTATTA 350149 |||||| | || | || || ||| ||| || ||||| || || | | || || Sbjct 16721 TGAAGATCTGTGCAGCGA-CTATTT-CCGCAAGACGATGGAGCCGGTCGCGCAGGTTTTG 16664 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 || |||| ||||||| || ||| | || || | || | || || || ||||| Sbjct 16663 CGTGACTCAAAGCTGTCCAAGAACCAGGTGGACGAGATCGTCCTGGTCGGCGGATCTACG 16604 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTT-TTTAATGGCAAAGAAC-CTTCTA 350267 || || || || || || || || || || |||| || || ||||| || | ||| | Sbjct 16603 CGCATCCCGAAGGTGCAGCAATTGCT-GATGGGTTTCTTCAACGGCAAGGATCTGTTCAA 16545 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTAT 350327 | || || || || || ||||| || || || || || | || ||||| | || | Sbjct 16544 G-TCGATCAACCCGGACGAAGCCGTCGCGTACGGCGCCACGGTGCAGGCGGCGATACTGA 16486 Query 350328 CTGGAAATAAGAGT-----TCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACT 350382 ||| ||| |||| || || | | || || |||| || || || | || | Sbjct 16485 GTGGCAAT--GAGTCATCGTCCAAGCTGCAAGACCTGCTACTGCTGGACGTCGCACCGTT 16428 Query 350383 TTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTAC 350442 ||| | || || || || | |||| ||| ||||| || ||||| | || | ||| Sbjct 16427 GTCGTTGGGTTTGGAGACGGCCGGTGGAGTTATGACCAAGCTCATTCCACGCAACACTAC 16368 Query 350443 TGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC 350502 || ||| | || ||| | || || || || || | | ||||| ||||| | || Sbjct 16367 GGTGCCTGCGAAGAAGACGCAGACGTTCTCGACGTACACTGATAACCAGCCGGGCGTGCT 16308 Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562 || ||||| || || || ||||| | || ||||| || || || | || Sbjct 16307 GATCCAAGTGTTCGAGGGCGAACGAACCATGACGCGTGATAACCATCTTCTGGGCAAGTT 16248 Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622 | ||| | || || || ||||| | || || ||||||||||| || | ||||| Sbjct 16247 CAACCTGGACGGTATCCCGCCCATGCCGCGCGGTGTGCCTCAGATTGACGTGACGTTCGA 16188 Query 350623 TATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATC 350667 ||||| || || ||||| || || | || || || || || Sbjct 16187 CGTTGATGTCAACGGCATTTTGAACGTCTCGGCCGTGGAGAAGTC 16143 >seq135 Length=100430 Score = 132 bits (146), Expect = 1e-25 Identities = 171/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 140502 TTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTA 140561 ||||| ||||||| || | | || || || |||||||||||||| || || || || Sbjct 42812 TTTTAGTTACCACCGCGAAGACGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTG 42871 Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 ||||| | || || || || || || || || ||||| ||||| ||||| ||||| Sbjct 42872 TAATCGCTCAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGG 42931 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 ||||| ||||| ||||| || |||||||| || || || || || ||||| || || Sbjct 42932 TCAGGCGGAATGCCTTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGAC 42991 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || |||| ||||| ||||| | || || || || |||||||| Sbjct 42992 GGCTCCACGTCGAGGGTAATGGTCTTGCCGGTCAACGTCTTCACGAAGATCTGCAT 43047 >seq2103 Length=22691 Score = 120 bits (132), Expect = 9e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 130719 TCATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCT 130778 |||||||| |||| | ||| || |||||||| ||||| || ||||| || || || || Sbjct 9242 TCATCATGACCAGCAAGCATCCCACCAAGCATGACAAAGTCTGCTCCAGCCCCGAACGCC 9301 Query 130779 TTCGCAATATCCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCCA 130838 || |||| || || ||| || | || || || |||| || || || || || | || Sbjct 9302 TTAGCAACGTCACCAGGACATGTGCAGCCTCCGTCAGAGATCACGTGGCCGTTGAGACCG 9361 Query 130839 TGTGCCGCATCAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACT 130898 || || |||||||||||||| | |||||| | || ||||| || ||||||||| | Sbjct 9362 TGAGCGGCATCAGCACACTCCAGCACAGCAGACAACTGCGGATAACCCACTCCAGTTTGT 9421 Query 130899 TTTCTTGTAGTACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCC 130954 || | || || || |||| |||||||| || || | || | || || ||||| Sbjct 9422 TTACGAGTGGTGCACACAGAGCCTGGACCGATGCCGACCTTGATGATGTCGGCTCC 9477 >seq290 Length=60535 Score = 116 bits (128), Expect = 1e-20 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || || || ||||| || || || || || || || Sbjct 10695 ACCACCACGCAGACGCAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 10636 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || || || || || || || || ||||| ||||| ||||| ||||| || Sbjct 10635 CAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 10576 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||||| || || ||||||||||| || ||||| ||||| || || || || || Sbjct 10575 GATTCCCTCCTTGTCCTGAATTTTCTGCTTGACATTGTCAATGCTGTCCGACGGCTCCAC 10516 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || | ||||| || || || || || || |||||||||||| Sbjct 10515 GTCGAGCGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCATT 10467 >seq188 Length=115905 Score = 105 bits (116), Expect = 2e-17 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| || || | | || || || || || |||||||| || || || || || || Sbjct 15376 CATACCGCCTCGCAGACGCAGCACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTC 15435 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || || || || || || || ||||| ||||| | ||| ||||| ||||| Sbjct 15436 GCTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGG 15495 Query 140627 AGGAATTCCTTCTTTATCCTGAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 || || ||||| || ||||| || ||| |||| || || || ||||| || || || | Sbjct 15496 CGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTG-ACGTTGTCGATCGAGTCCGAAGGCT 15554 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || | ||||| ||||| | || || || ||||||||||| Sbjct 15555 CCACGTCCAGCGTGATCGTCTTGCCGGTCAAGGTCTTCACGAAAATCTGCAT 15606 >seq1199 Length=13833 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 1349 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 1408 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 1409 CCCTGCTTCTCCAT 1422 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 2378 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 2437 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 2438 CCCTGCTTCTCCAT 2451 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 3407 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 3466 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 3467 CCCTGCTTCTCCAT 3480 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 4437 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 4496 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 4497 CCCTGCTTCTCCAT 4510 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 5456 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 5515 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 5516 CCCTGCTTCTCCAT 5529 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 6476 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 6535 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 6536 CCCTGCTTCTCCAT 6549 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 7496 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 7555 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 7556 CCCTGCTTCTCCAT 7569 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 8516 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 8575 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 8576 CCCTGCTTCTCCAT 8589 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 9536 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 9595 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 9596 CCCTGCTTCTCCAT 9609 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 10556 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 10615 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 10616 CCCTGCTTCTCCAT 10629 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 11576 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 11635 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 11636 CCCTGCTTCTCCAT 11649 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 12596 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 12655 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 12656 CCCTGCTTCTCCAT 12669 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 13622 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 13681 Query 235950 CCCAGCATCTCCAT 235963 ||| || || |||| Sbjct 13682 CCCTGCTTCCCCAT 13695 Score = 84.2 bits (92), Expect = 7e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 235891 GGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAAC 235950 ||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 323 GGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA- 381 Query 235951 CCAGCATCTCCAT 235963 || || ||||||| Sbjct 382 CCTGCTTCTCCAT 394 >seq230 Length=97306 Score = 93.3 bits (102), Expect = 1e-13 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 235884 ATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGA 235943 |||| |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||| Sbjct 30 ATATCCGGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGA 89 Query 235944 TCAAAACCCAGCATCTCCA 235962 || | |||| || |||||| Sbjct 90 TCGATACCCTGCTTCTCCA 108 >seq42 Length=139738 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 1000 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 1059 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 1060 CCCTGCTTCTCCAT 1073 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 2016 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 2075 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 2076 CCCTGCTTCTCCAT 2089 >seq4690 Length=2484 Score = 89.7 bits (98), Expect = 2e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 74488 GTGGGATTCGAACCCACGAGTCTTACGACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 74547 |||||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 1141 GTGGGATTTGAACCCACGAGTGCGAACACAGTAGAACTTGAGTCTACCCCCTTAGACCGC 1200 Query 74548 TCGGGCA 74554 ||||||| Sbjct 1201 TCGGGCA 1207 >seq4274 Length=3065 Score = 89.7 bits (98), Expect = 2e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 74488 GTGGGATTCGAACCCACGAGTCTTACGACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 74547 |||||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 47 GTGGGATTTGAACCCACGAGTGCGAACACAGTAGAACTTGAGTCTACCCCCTTAGACCGC 106 Query 74548 TCGGGCA 74554 ||||||| Sbjct 107 TCGGGCA 113 Score = 89.7 bits (98), Expect = 2e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 74488 GTGGGATTCGAACCCACGAGTCTTACGACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 74547 |||||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 2308 GTGGGATTTGAACCCACGAGTGCGAACACAGTAGAACTTGAGTCTACCCCCTTAGACCGC 2367 Query 74548 TCGGGCA 74554 ||||||| Sbjct 2368 TCGGGCA 2374 >seq98 Length=98438 Score = 89.7 bits (98), Expect = 2e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 74488 GTGGGATTCGAACCCACGAGTCTTACGACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 74547 |||||||| |||||||||||| | ||||||||||||||||||||||||||||||| | Sbjct 47425 GTGGGATTTGAACCCACGAGTGCGAACACAGTAGAACTTGAGTCTACCCCCTTAGACCGC 47484 Query 74548 TCGGGCA 74554 ||||||| Sbjct 47485 TCGGGCA 47491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515151174714551