Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001482985.1_202015-12- 29] 5,317 sequences; 71,413,976 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq111 104 2e-17 >seq111 Length=87890 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 118513 TGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTG 118572 || ||||| || |||||| | || || |||| || |||| || ||||| || | Sbjct 66365 TGGATGAACTCGCCAGGTTTTAGTCCCGTCACTTGTGCAACCAGTCGTGTCAGCAGCGCG 66306 Query 118573 TAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGG 118632 |||||||| | || ||||| || || ||||||||||| || |||| |||||||| || Sbjct 66305 TAGCTGGCAATGTTGAAAGGCACTCCAAGACCCATGTCGGCCGATCGCTGGTACATCTGA 66246 Query 118633 CAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACC 118692 || || | |||||||| ||||| || ||||| | | ||||| || || ||||| || Sbjct 66245 CACGATAATTCCCCGTTGGCAACGTAGAACTGGCAGAACATGTGGCAAGGCGGCAGGGCC 66186 Query 118693 AT 118694 || Sbjct 66185 AT 66184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414449941514788