Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001483015.1_202015-12- 29] 6,142 sequences; 81,610,141 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq759 183 6e-41 seq1672 172 1e-37 seq4565 165 2e-35 seq4505 154 3e-32 seq1517 149 1e-30 seq2652 143 6e-29 seq5877 123 5e-23 seq3337 107 4e-18 seq6109 102 2e-16 seq5644 95.1 3e-14 >seq759 Length=119387 Score = 183 bits (202), Expect = 6e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || ||||| || || ||||| || | ||| || || ||||||||||||||| Sbjct 32785 ACCGCCTCGCAGACGCAGCACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCACT 32844 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || ||||||||||| || |||||| ||| Sbjct 32845 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGCGG 32904 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| ||||||||| || ||| | ||||| | |||||||| || || Sbjct 32905 GATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCCAC 32964 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||||||||| || ||||| ||||| ||||| |||||||| || Sbjct 32965 GTCCAGCGTGATCGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATCTT 33015 Score = 181 bits (200), Expect = 2e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || ||||| || | || || || ||||||||||||||| Sbjct 32102 CCGCCACGCAGACGCAGCACCAGGTGGAGNGTAGACTCCTTCTGGATGTTGTAGTCACTC 32161 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || || || ||||||||||| || |||||| ||| Sbjct 32162 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGCGGG 32221 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| ||||||||| || ||| | ||||| | |||||||| || || Sbjct 32222 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCCACG 32281 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 32282 TCCAGCGTGATCGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 32328 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || ||||| || || ||||| || | ||| || || |||||||||||||| Sbjct 32557 ACCGCCTCGCAGACGCAGCACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 32616 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || ||||||||||| || |||||| ||| Sbjct 32617 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGCGG 32676 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| ||||||||| || ||| | ||||| | |||||||| || || Sbjct 32677 GATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCCAC 32736 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 32737 GTCCAGCGTGATCGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 32784 Score = 174 bits (192), Expect = 3e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || ||||| || || ||||| || | || || || |||||||||||||| Sbjct 32329 ACCGCCTCGCAGACGCAGCACCAGGTGGAGNGTAGACTCCTTCTGGATGTTGTAGTCNCT 32388 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || ||||||||||| || |||||| ||| Sbjct 32389 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGCGG 32448 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| ||||||||| || ||| | ||||| | |||||||| || || Sbjct 32449 GATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCCAC 32508 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 32509 GTCCAGCGTGATCGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 32556 >seq1672 Length=23672 Score = 172 bits (190), Expect = 1e-37 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || ||||| || | || || || |||||||||||||| Sbjct 22782 CCACCACGCAGACGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 22841 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || || || ||||||||||| || |||||| ||| Sbjct 22842 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGCGGG 22901 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| ||||||||| || ||| | ||||| | |||||| | || || Sbjct 22902 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGANGGCTCCACG 22961 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 22962 TCNAGNGTNATNGTCTTGCCGGTCAANGTCTTCACGAAGATCTGCAT 23008 Score = 165 bits (182), Expect = 2e-35 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || ||||| || | || || || |||||||||||||| Sbjct 22326 CCACCACGCAGACGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 22385 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || || ||||||| ||| || |||||| |||| Sbjct 22386 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGA 22445 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| || ||||| ||| || ||| | ||||| | |||||||| || || Sbjct 22446 ATGCCTTCCTTGTCCTGAATCTTCTGC-TTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 22504 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 22505 GTCCAGCGTGATCGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 22552 Score = 154 bits (170), Expect = 3e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || ||||| || | || || || ||||||||||| || Sbjct 23010 CCACCACGCAGACGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGCTC 23069 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || || ||||||| ||| || |||||| |||| Sbjct 23070 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGA 23129 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| || ||||| ||| || ||| | ||||| | |||||| | || || Sbjct 23130 ATGCCTTCCTTGTCCTGAATCTTCTGC-TTCACGTTGTCGATCGAGTCCGACGGCTCCAC 23188 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 ||||| || || ||||| || ||||| ||||| ||||| |||||||| ||| Sbjct 23189 GTCGAGGGTAATGGTCTTGCCGGTCAACGTCTTCACGAAGATCTGCATCTTC 23240 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || ||||| || || ||||| || | || || || |||||||||||||| Sbjct 22553 ACCGCCTCGCAGACGCAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 22612 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||||| ||| || |||||| ||| Sbjct 22613 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGG 22672 Query 282992 AATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || |||||||| || ||||| ||| || ||| | ||||| | |||||| | || | Sbjct 22673 AATGCCTTCCTTGTCCTGAATCTTCTGC-TTGACGTTGTCGATCGAGTCCGACGGCTCCA 22731 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 22732 CGTCGAGGGTAATGGTCTTGCCGGTCAACGTCTTCACGAAGATCTGCAT 22780 Score = 145 bits (160), Expect = 2e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || ||||| || | || || || ||||||||||| || Sbjct 22097 ACCACCGCGAAGACGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGCT 22156 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||||| ||| || |||||| ||| Sbjct 22157 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGG 22216 Query 282992 AATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || |||||||| || ||||| ||| || ||| | ||||| | |||||| | || | Sbjct 22217 AATGCCTTCCTTGTCCTGAATCTTCTGC-TTCACGTTGTCGATCGAGTCCGACGGCTCCA 22275 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 22276 CGTCGAGGGTAATGGTCTTGCCGGTCAACGTCTTCACGAAGATCTGCAT 22324 >seq4565 Length=138104 Score = 165 bits (182), Expect = 2e-35 Identities = 178/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || ||||| || | || || || |||||||||||||| | Sbjct 117988 ACCACCACGCAGACGCAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 118047 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 118048 CAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 118107 Query 282992 AATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| || || || ||| || || | || || ||||||| | || | Sbjct 118108 GATTCCCTCCTTGTCCTGAATTTTCTGC-TTGACATTGTCAATGCTGTCCGACGGCTCCA 118166 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 | ||||| ||||| ||||| ||||| | ||||| ||||| |||||||||||| Sbjct 118167 CGTCGAGCGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCATTTTC 118219 >seq4505 Length=81093 Score = 154 bits (170), Expect = 3e-32 Identities = 149/189 (79%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||||||||||| ||||| || || || ||||| |||||| Sbjct 71259 TTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 71200 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | ||| || |||||| ||| || ||||||||||| ||||| || ||| || || | || Sbjct 71199 AGACGCTGCTGGTCAGGCGGGATTCCCTCCTTGTCCTGGATTTTCTGC-TTGACATTGTC 71141 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||||| | || || ||||| ||||| ||||| |||||||| ||||| || || Sbjct 71140 AATGCTGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAAGGTCTTCACAAA 71081 Query 283091 TATCTGCAT 283099 |||||||| Sbjct 71080 GATCTGCAT 71072 >seq1517 Length=75306 Score = 149 bits (164), Expect = 1e-30 Identities = 148/189 (78%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||||||||||| ||||| || || || ||||| |||||| Sbjct 72491 TTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 72432 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | || || |||||| ||| || ||||||||||| ||||| || ||| || || | || Sbjct 72431 AGGCGCTGCTGGTCAGGCGGGATTCCCTCCTTGTCCTGGATTTTCTGC-TTGACATTGTC 72373 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||||| | || || ||||| ||||| ||||| |||||||| ||||| || || Sbjct 72372 AATGCTGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAAGGTCTTCACAAA 72313 Query 283091 TATCTGCAT 283099 |||||||| Sbjct 72312 GATCTGCAT 72304 >seq2652 Length=38300 Score = 143 bits (158), Expect = 6e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || ||||| || | || || || ||||||||||| || Sbjct 33049 ACCACCGCGAAGACGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGCT 33108 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||||| ||| || |||||| ||| Sbjct 33109 CAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGG 33168 Query 282992 AATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || |||||||| || ||||| ||| || ||| | ||| | | |||||| | || | Sbjct 33169 AATGCCTTCCTTGTCCTGAATCTTCTGC-TTCACGTTGTCGNTCGAGTCCGACGGCTCCA 33227 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 | ||||| || || ||||| || ||||| ||||| ||||| |||||||| ||| Sbjct 33228 CGTCGAGGGTAATGGTCTTGCCGGTCAACGTCTTCACGAAGATCTGCATCTTC 33280 >seq5877 Length=64605 Score = 123 bits (136), Expect = 5e-23 Identities = 602/939 (64%), Gaps = 33/939 (4%) Strand=Plus/Minus Query 229536 TTCCCTATTCAATACCCCGACCTCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTGG 229595 ||||| ||||| | | ||| | ||| | ||||| ||||| || | ||| |||| ||| Sbjct 10527 TTCCCCATTCAGGAACACGAAGTGTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTCTGG 10468 Query 229596 ACCACGGAGGAAGTCCCCCTAAATGCA-GACGTCGTCGACTGGCGCGAGAAACTCAACGA 229654 || | ||||| || ||| |||| ||| || |||||| || || |||| || Sbjct 10467 ACGGCTGAGGAGCTCGACCTTG-TGCACGACCTCAAGGACTGGAGCAAG---CTCACGGA 10412 Query 229655 CGATGAACGCCATTTCATCAAGCACATTCTCGGGTTTTTTGCAGGTTCCGACGGTATCGT 229714 | | || || || |||||||||||| | |||| || || |||| ||||||||||| Sbjct 10411 CAACGAGCGACACTTCATCAAGCACGTGCTCGCCTTCTTCGCAGCCAGTGACGGTATCGT 10352 Query 229715 GATGGAAAACTTGCAGACTAACTTCAGCGTCGAAGTAACGGTCCCAGAGGCACGGCAGTT 229774 || || |||||| | ||||||||| |||||| ||| || ||||| || || Sbjct 10351 GAACGAGAACTTGGCCATGAACTTCAGCAACGAAGTGCAGGTGCCCGAGGCTCGTTGCTT 10292 Query 229775 TTACGCATACCAGACGTTCAATGAATCTGTTCATTCGGAACAGTATGCCCTTCTTATTGA 229834 || | | ||||| || ||| |||| ||||| || | || || ||||| Sbjct 10291 CTATGGCTTCCAGATCGCCATTGAGAACATTCACTCGGAGGTCTACTCACTGCTCATTGA 10232 Query 229835 CGCGCTCATTTCCGACGAGCGAGAGCGTGCCGAACTGTTCGACGCCATCGAAAACATCCC 229894 | || ||| |||| | ||| | | | || | ||||| || | |||||| Sbjct 10231 CACGTACATCAAGGACGCGATCGAGAAGGACCATCTCCTGCGTGCCATTGAGACCATCCC 10172 Query 229895 GGCGGTCCATAACAAAGCGCGTTGGGCTCAGAAGTGGCTGGAACCCAGTAAA---TCGTT 229951 ||| || || || | ||||| | |||||| || || || | || | Sbjct 10171 TTGTGTCACGAAGAAGGCTCACTGGGCACTCAAGTGGTGCGACCCGCGTGTATCCTCCTA 10112 Query 229952 TGCAGAGCGTCTCGTCGCGTGGGTGTGC-GTTGAGGGTATTCTGTTCTCCGGGAGTTTCT 230010 | ||||| || | || | | ||| || || || || | ||||| || ||||| Sbjct 10111 CCCGGAGCGCCTGCTGGCTTTCG-CTGCTGTGGAAGGCATCTTCTTCTCGGGCTCTTTCT 10053 Query 230011 GCGCCATCTTTTGGCTACGCAACAAG---GGCGTCATGCCCGGGCTCGGTCTGTCGAACG 230067 || |||||||||||||| || ||| ||| |||||||||| || | | ||||||| Sbjct 10052 GCTCCATCTTTTGGCTA---AAGAAGCGCGGCCTCATGCCCGGTCTGAGCTTCTCGAACG 9996 Query 230068 AATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGGTCTTGTATTCGAAGC 230127 | ||||||| | ||||| || | ||| | | || | | | ||||| || |||| Sbjct 9995 AGCTCATCAGTCGTGACGAGGGCATGCACACGGACTTCGCCTGCCTTTTGTACTCCAAGC 9936 Query 230128 TAAATAACAAACTACCTTTCGA-AACGGTG-AAAC-AAATCGTCACAGAAGTAGTTGCAA 230184 | | ||| || || || | | ||| | || | ||| | || | || | | Sbjct 9935 TGGTCACCAAGCTGCC---GGAGAGCCGTGTACACGAGATCATTCGTGACGCTGTGGTGA 9879 Query 230185 ATGAAAAGGAGTTCATTTGCGACGCTATTCCT-TGCCGTCTTATCGGCATGAATGCTGAT 230243 ||| | ||||| | | ||| | | ||| || | || || || ||||| ||| Sbjct 9878 TTGAGCACGAGTTTGTGCGTGACTCGCTCCCTGTGGAG-CTGATTGGTATGAACTCTGCC 9820 Query 230244 CTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGG---GTAC 230300 |||||| | || || || || ||||| ||||| ||| | || |||| || || | Sbjct 9819 CTCATGTGCCAGTACATTGAGTTCGTGGCTGACCGTCTGCTCTACTCGCTTGGTGTGTCC 9760 Query 230301 GAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGG 230360 ||| | || || | |||||||| || | | ||||| | || || ||||| || Sbjct 9759 AAGA---TCTACCACGCTAAGAACCCTTTTGACTGGATGGACATGATCTCTCTCCAAGGC 9703 Query 230361 AAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAAGGCC--CGGTGTATTAAAA 230417 || || ||||| ||||| |||||||| |||| || || |||||| || || | Sbjct 9702 AAGACCAACTTTTTCGAGAAGCGTGTGGGCGAGTACTCCAAGGCCGGCGTTGGTGTCGCC 9643 Query 230418 CCTGAGGATAATGTTTTCGCTATGGACGGTGACTTTTAA 230456 ||||||| | |||||| || |||| | ||||||||| Sbjct 9642 GCTGAGGAGCAGGTTTTCACTCTGGATGCGGACTTTTAA 9604 >seq3337 Length=105003 Score = 107 bits (118), Expect = 4e-18 Identities = 291/441 (66%), Gaps = 6/441 (1%) Strand=Plus/Plus Query 273620 AGACCAACCGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGAC 273679 ||||||||| || || || || | |||||||| || | |||| ||||| || || Sbjct 19154 AGACCAACCCGTACCGATTCCTTCCGCCCCATTCACAAGCAACATCGGAATAATAGGCAC 19213 Query 273680 ATAATATTCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATC 273739 || || | ||||||| |||||||||| ||| |||| || || || Sbjct 19214 GTAGTACACTGGCTCAACAGGGAAGCCATCGTCGTCGGCGTAGCGTAACAGCGCGTCGTC 19273 Query 273740 CGTATCAACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACT 273799 || ||| ||| || || || | |||| |||||| || || | | ||| Sbjct 19274 TTCTTCGGGGAATACCAAGCGAGTGTGCTTCTGCAGTAACGTGAAGATATATCGAGGACT 19333 Query 273800 CGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCT-CGGG--CAGTAGCCA 273856 ||| |||||| ||||||||||| | | |||||| ||||| |||| |||||| | Sbjct 19334 AGCAGCGTCCTTACCACCTTGCAGTCGAGTACCAAATTGACCTGACGGGTACAGTAG--A 19391 Query 273857 GTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGA 273916 | | ||| ||| || ||| | ||||| ||||| || || || ||| || | || Sbjct 19392 GGC-AGGTTATTGGACCCCACGAAGTCCTGCGCCATGTTGACAATCGTCGAGTGTAACGA 19450 Query 273917 TACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTT 273976 | || ||||||||||| || |||| || | |||||| | |||||| ||||| Sbjct 19451 GGCTTCTCCGTGGTGATAAGCTGTGTGCTCACTGCAGTAACCAGCCAGCTGAGCCACCTT 19510 Query 273977 CACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAACACCTTCCGCTGCGAGGGCTT 274036 ||| || ||||| | || || || || | ||| ||||||||||||||| || Sbjct 19511 CACTTCACTCGTAAGCTTGCGTTTTAAACAAGCGAACAGAACCTTCCGCTGCGAGATNTT 19570 Query 274037 GAACCCATCAACGACCGATGG 274057 || ||||| || |||||||| Sbjct 19571 GAGACCATCGACCACCGATGG 19591 >seq6109 Length=29660 Score = 102 bits (112), Expect = 2e-16 Identities = 254/383 (66%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 273597 GGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAAGAACCATTCACC 273656 |||||||| | ||||| | |||||||| || || |||||| | || ||||| Sbjct 13331 GGGTTGTAGTTGGGAACTGAGCTGGACCAACCCGTTCCGATACCGTCACTGCCGTTCACG 13272 Query 273657 AGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATCACCATCGTCGTAA 273716 || | | ||||||||||||| || |||| ||||| || | || || || | Sbjct 13271 AGCACCATGGGGATAATTGGGATGTACCATTCCGGCTCGATGGACTGGCCGTCTTCATTC 13212 Query 273717 AGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTCTGAGGATTCAGT 273776 || ||||||| || | | ||| | | || | | || || | | | || Sbjct 13211 AGATACTTCAGACAATCGTTGTCCAAAGGATCGTAGATACGGCGAGTAAGCTGCTCTAGG 13152 Query 273777 TTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAAC 273836 || |||||||| || | ||||| || ||| || ||||| ||| | || ||| ||| Sbjct 13151 TTGGTGAAAATATAACGAGCACTGGCCGAGTCTTTACCACCCATCAGACGCGTACCGAAC 13092 Query 273837 TGACCC-TCGGG--CAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATA 273893 ||||| ||||| |||||| || ||||||||||| || ||| | ||||| |||||| Sbjct 13091 TGACCAATCGGGGACAGTAG---GTGGATGTTGTTGCTGCCAACGAAGTCCTGCGCCATA 13035 Query 273894 TTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATA 273953 ||||||||| ||||| || | ||| ||||| || ||||| ||| || | | Sbjct 13034 TTCACGATACAGCCCTGTAGACTTTGCTCACCGTGATGGTAGGCAGAGTGCTCAGACACG 12975 Query 273954 TAACCACTGAACTGAGCAACCTT 273976 || ||| ||||| || ||||| Sbjct 12974 TAGCCAGCCAACTGTGCCACCTT 12952 >seq5644 Length=66598 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 316162 TCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGA 316221 || ||||| ||||| || ||||||| ||||||||||| |||| ||| ||||| Sbjct 23029 TCCTTGTCCTCACCAGACTGGAAACGCCACTGGATGTACTGGTTGGCAGTCTCATCAAGG 23088 Query 316222 TGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 316281 || ||| |||||||||||||||||||| || ||||| || | |||||| || ||| Sbjct 23089 TGCGACTCAATGTGGTGGAAAGCGTGCTGAGCGACGTAGGCGAAACGCATGGAAGGGTGC 23148 Query 316282 TTCCAAACGCTACCGTTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGAGAGTACTT 316341 ||||| || ||| | || | |||| | || || |||| || || || ||| Sbjct 23149 TTCCACACCTGACCACTGGTCGGCTCCACTTCACCCGTCAGCATCTTGATCAGCGTAGAC 23208 Query 316342 TTTCCCGCGCCGTTTTCACCCACGACACCGAT 316373 || || || ||||| |||| ||| |||| Sbjct 23209 TTACCGGCACCGTTGGGTCCCAGCACAGCGAT 23240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046656827512868