Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509465.1_202013-12- 18] 6,489 sequences; 48,075,161 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1842 114 1e-20 >seq1842 Length=4307 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||||||| || ||| || || || || || ||| Sbjct 4103 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCGAGCTGCTTGCCA 4162 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| ||||| || ||||||||||| ||||| |||||| || || Sbjct 4163 GCGAAGATCAGACGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCCTGAATCTTCTGCTTC 4222 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | | ||| | | || ||||| | ||| | || |||||||||| || Sbjct 4223 ACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGGGTAATGGTCTTGCCGGTCAACGTC 4282 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 4283 TTCACGAAGATCTGCATG 4300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420101173802268