Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509465.1_202013-12- 18] 6,489 sequences; 48,075,161 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq2953 111 8e-20 >seq2953 Length=18592 Score = 111 bits (122), Expect = 8e-20 Identities = 330/503 (66%), Gaps = 21/503 (4%) Strand=Plus/Plus Query 66066 GCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGAT 66125 |||| || || || || || || ||||| | | |||||| ||| || || |||||| Sbjct 8825 GCCTTTATTGATGCAGAGCACGCTATCGACGCCCACTACGCCAAGGCTCTGGGAGTGGAT 8884 Query 66126 GTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 66185 | ||| ||| || |||||||||| |||| || | || |||||||||| ||| Sbjct 8885 ATTGACGCCCTCTACGTCTCGCAGCCAGACTCTGGAGAAGAAGCTCTGGAGATCGCAGAC 8944 Query 66186 CTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTG 66245 ||| || || || | || | | | || |||| |||||| || |||||| Sbjct 8945 ACGCTCATCCGATCGGGTGCTGTAGACCTTGTGGTGCTGGATAGTGTGGCAGCTCTGGTG 9004 Query 66246 CCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTG 66305 || || || ||||| || || || || || ||| ||| | | || || || || || Sbjct 9005 CCTCGTGCCGAGCTGGAGGGTGAAATGGGAGACCAGCAGATTGCTCTACAAGCGCGTCTT 9064 Query 66306 ATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAA---CACGCTCACC 66362 ||| ||||| || | ||||||||||| | | ||| |||| ||| | | | Sbjct 9065 ATGAGCCAGGCACTGAGAAAGCTGACCGGGTCACTGTCCAAGTCCAATTGCACCATTATC 9124 Query 66363 CTGTGGGTGAATCAGCTGCGCGAGAAGATCGG---CAACGTGGGCTACGGCCCGAATGAG 66419 | | || ||| | || |||| | || || | | || | | ||||| | | Sbjct 9125 TTCC---TCAACCAGATCCGTCAGAAAGTAGGTATCATCTTTGGATCC--CCCGAG-GTG 9178 Query 66420 ACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAG- 66478 || | ||||||| ||| |||||| |||||| |||||||| ||||| ||||| | Sbjct 9179 ACGTCA---GGTGGTACGGCATTGCGCTACTACGCGTCGGTGCGGCTGGATATCCGCCGT 9235 Query 66479 --GATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTT 66536 || |||| | ||||||||||| ||| |||||||||| ||| || ||||| Sbjct 9236 AAGACAGCCATC---AAGGAAGGCGACCAGGTTGTCGGCAACGAGACGGTGGTCAAGGTG 9292 Query 66537 GTCAAGAACAAGCTGGCGCCTCC 66559 | |||||||||| |||| |||| Sbjct 9293 GCCAAGAACAAGTTGGCTTCTCC 9315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242451224304188