Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509465.1_202013-12- 18] 6,489 sequences; 48,075,161 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1485 84.2 2e-11 >seq1485 Length=23889 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 108390 CTACAAGGCCACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACA 108449 ||||||||||| ||| | | |||||||| ||| ||| |||| |||| | Sbjct 19301 CTACAAGGCCAAACTGCCGCTGCGTGTGTTCCTCATGCTCTGCAACTCGATGGCCTTCGA 19242 Query 108450 GAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGAC 108509 | ||||||| ||||| || || ||| | || ||||||||| ||| |||||||| Sbjct 19241 GGGCACCATCTTCGAGTGGTCGCGTGACCACCGCGTGCACCACAAGGGCTCGGACACGAC 19182 Query 108510 GGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 ||| ||||| |||||| | | | || ||| ||||||||| |||| ||| ||||| | Sbjct 19181 GGCTGACCCGCACAACTCGGAGCGCGGACTCTTCTTCTCGCACATGGGCTGGGTCATGGT 19122 Query 108570 G 108570 | Sbjct 19121 G 19121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381742607617416