Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509485.1_202013-12- 18] 6,813 sequences; 47,449,104 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4890 96.9 8e-15 seq3105 84.2 5e-11 >seq4890 Length=10138 Score = 96.9 bits (106), Expect = 8e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 ||||||||||||| |||||||||| || ||| ||||| | | || | | Sbjct 4657 GCGTCCTTGTAGAGCATGAAGGGCACTCCCGTCTCAATCTGAGCGTCTAGGATAGCGAAC 4598 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | || | | ||| | |||||| || ||||| | ||||| Sbjct 4597 CACAGCTGCTGAGCGTTGATTGTCTTACGCGCACGTCCTTCCTTCTCGTACTTTTCATAC 4538 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || |||| || || | || | |||| ||||| |||||||| || ||||| || Sbjct 4537 AGAGCTTCAAACTCATCGCCCCAGCACTCGTACAGACCAGGAGCTTCGTTGGGACAGAAC 4478 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 | |||||| || |||| || ||| || |||||||||||||| || | ||| | |||| Sbjct 4477 AAACTCCACTTGCCATTGGCCTCCACTCTCTTCATGAAGAGATCAGGCACCCACAGCGCG 4418 Query 173347 TAGAACAA 173354 || ||||| Sbjct 4417 TAAAACAA 4410 >seq3105 Length=35891 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/215 (69%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| || ||| || || || || || || ||||| | || ||||| Sbjct 16795 AAAATG---CAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACGCTCGACGTGGAG 16739 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 || |||| | || || ||||| || ||||| || || || ||||| ||| Sbjct 16738 CCGTCGGACAGCATTGACAATGTCAAGCAGAAAATTCAGGACAAGGAGGGAATCCCGCCT 16679 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| || | || ||||||||||| |||||| | || || || | ||| || | || Sbjct 16678 GACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCGGAC 16619 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||| ||||||| ||||| || || ||||| || Sbjct 16618 TACAACATCCAGAAGGAGTCGACCCTGCACCTGGT 16584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181717637015773