Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509485.1_202013-12- 18] 6,813 sequences; 47,449,104 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq2571 104 2e-17 >seq2571 Length=74305 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 118480 TGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCT 118539 || |||| || || || || || || || || ||||| || |||||| | || || Sbjct 72182 TGGTTCAGGTACACGTGTGCGTCGCCGATAACGTGGATGAACTCGCCAGGTTTTAGTCCC 72123 Query 118540 GTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCC 118599 |||| || |||| || ||||| || ||||||||| | || ||||| || || Sbjct 72122 GTCACTTGTGCAACCAGTCGTGTCAGCAGCGCGTAGCTGGCAATGTTGAAAGGCACTCCA 72063 Query 118600 AGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAA 118659 ||||||||||| || |||| |||||||| || || || | |||||||| ||||| || Sbjct 72062 AGACCCATGTCGGCCGATCGCTGGTACATCTGACACGATAATTCCCCGTTGGCAACGTAG 72003 Query 118660 AACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 ||||| | | ||||| || || ||||| |||| Sbjct 72002 AACTGGCAGAACATGTGGCAAGGCGGCAGGGCCAT 71968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414442384566532