Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509505.1_202013-12- 18] 6,724 sequences; 47,809,385 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq5134 93.3 3e-13 >seq5134 Length=18240 Score = 93.3 bits (102), Expect = 3e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390 ||||| |||||||| || || || ||| | | ||| || || |||| || | Sbjct 12060 ATTTCGTCTATGGTGTTGATCAAGATGCGAGAGGTGGCCGAGGCATTCATTGGCAAACAT 12119 Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 || | | | || || | || || || || || || || ||||| || || ||||| ||| Sbjct 12120 GTGAAGAACGCGGTGGTGACGGTCCCGGCCTACTTCAACGACTCGCAGCGCCAAGCGACT 12179 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||| ||| ||||||||| | ||||| || ||||| ||||| || || || || Sbjct 12180 AAAGATGCGGGAGCTATTGCTGGTTTGAATGTGCTGCGTATCATCAACGAGCCGACGGCC 12239 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| | || ||||| || || || Sbjct 12240 GCTGCGATCGCCTATGGGCTGGACAA 12265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028940404554760