Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509505.1_202013-12- 18] 6,724 sequences; 47,809,385 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq4152 84.2 3e-11 >seq4152 Length=2056 Score = 84.2 bits (92), Expect = 3e-11 Identities = 111/149 (74%), Gaps = 9/149 (6%) Strand=Plus/Plus Query 142820 TCGCTATCGACTGGGTCATCAATCGGTCACCCTTATTTTAAGGGAGGCTCAATGTACAGT 142879 |||||| |||||||||||| | ||| | || | | | ||||| |||||||||| Sbjct 1830 TCGCTAACGACTGGGTCATTTGTGGGTTTGC----TTATCAAGCAGGCTTAATGTACAGT 1885 Query 142880 C-AGGCCACCATAAGGATCCTTTATAACCAGGGATACGAGTGGTGCTC-ATGTGATCGAG 142937 | || ||| |||||| ||| |||| || |||||||| |||| ||||||||| Sbjct 1886 CTAGCCCAGCATAAG--TCCGGG-TAACGCCGGGTACGAGTGCTGCTTTATGTGATCGGA 1942 Query 142938 CGAATTGAAAATTGAAACTCGGGAAGCAT 142966 ||||||||||||||||| ||||||||| Sbjct 1943 CGAATTGAAAATTGAAATCTGGGAAGCAT 1971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704523179849280