Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509525.1_202013-12- 18] 6,791 sequences; 47,716,731 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4740 104 2e-17 >seq4740 Length=106065 Score = 104 bits (114), Expect = 2e-17 Identities = 131/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || ||||| ||||| || | ||| | || ||||| |||||||| ||||| ||||| Sbjct 16260 ATGTACGTGTCAATGAGCAGTGAGTAGACCTCCGAGTGAATGTTCTCAATGGCGATCTGG 16201 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTC--CGCCA 16589 || ||||||||||| |||||||| | | || ||||| | || |||| |||| Sbjct 16200 AAGCCATAGAAGCAACGAGCCTCGGGCACCTGCACTTCGTTGCTGAA--GTTCATGGCCA 16143 Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 |||||| ||||||||||||||||| || || || || || | | |||||| ||||| Sbjct 16142 AGTTCTCGTTCACGATACCGTCACTGGCTGCGAAGAAGGCGAGCACGTGCTTGATGAA 16085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511370987310120