Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509525.1_202013-12- 18] 6,791 sequences; 47,716,731 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq4161 109 6e-19 >seq4161 Length=9822 Score = 109 bits (120), Expect = 6e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || || || |||||||| || |||| |||| ||| || || || || ||| Sbjct 9569 GTAGACTCCTTCTGGATGTTGTAGTCACTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCA 9628 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||| ||||| || || || |||||||| ||||| || ||||| || Sbjct 9629 GCGAAGATCAAACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTG 9688 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | || ||||| || || || || | || | ||||||||||||||| || Sbjct 9689 ACGTTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATCGTCTTGCCGGTCAAGGTC 9748 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 9749 TTCACGAAGATCTGCATA 9766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506971360815120