Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq32329 396 3e-105 seq27878 396 3e-105 seq27877 396 3e-105 seq26115 396 3e-105 seq32285 145 8e-30 seq30472 140 3e-28 seq35386 127 2e-24 seq12976 127 2e-24 seq25936 93.3 4e-14 >seq32329 Length=12294 Score = 396 bits (438), Expect = 3e-105 Identities = 613/864 (71%), Gaps = 20/864 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| |||||||| |||||||||| | ||||| || || | | ||| Sbjct 10830 GAGCCGTTCCTGGTGGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 10889 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 ||||| |||||||| ||||| ||||| ||||||||||| | ||||||| |||| ||| Sbjct 10890 GTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTG 10949 Query 116696 -TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 | || | | | || ||||||| ||| ||||||||||| || ||||||||| Sbjct 10950 GTGCACGACCTCAAG-GACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGAC 11008 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 |||||||| || ||||| |||||||||||||| || |||||||| |||| | | || Sbjct 11009 GGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTT 11068 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | | | |||||||||||| ||||||| || ||||||||||| || ||||||||||| || Sbjct 11069 CAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGCCATCGA 11128 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | |||||||| |||| ||| ||||||||||||||| | || || Sbjct 11129 GAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGA 11188 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| || || || ||||||||||||||| |||||||| | |||||||| |||| Sbjct 11189 GAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGTGACGAAGAAGGCCCAGTG 11248 Query 116995 GGCGCTGCGCTGGATCG-CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||||| ||| || || || | | | | | | | ||||||||| |||| |||| Sbjct 11249 GGCGCTCAAGTGGTGCGACCCGC-GCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCG 11307 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || |||||| ||||||| |||||| ||| | | || || ||||| ||||| | Sbjct 11308 CCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGC 11367 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || |||||||| |||| ||| |||||||||||| | | |||||||| ||| Sbjct 11368 GCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGC 11427 Query 117174 ATTGCGACTTTGCCTGTTTGCTG---TTCAAGCATTTGGTG---CAGC-GACCGAGCGCG 117226 | ||||| || || ||||| | ||||| ||||| ||| | | ||| || Sbjct 11428 ACACGGACTTCGCGTGCCTGCTGTACTCCAAGC---TGGTGAACAAGCTGCCTGAGAGCC 11484 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 ||| || | |||| || |||||||| | |||||||| ||| | ||| Sbjct 11485 GCGTGCACC----AGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGAC 11540 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 ||||||||||| ||| | || | || | ||| | |||| || ||||||||||| Sbjct 11541 TCGCTGCCGGTGGAGCTGATCGGCATGAACT-CGACGCTCATGTGCCAGTACATCGAGTT 11599 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 || || ||| | |||||| | | ||| || ||||| ||||||| ||||| Sbjct 11600 TGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCC 11659 Query 117406 GCTGGACTTTATGAACCTCATCTC 117429 | | |||| ||| || | ||||| Sbjct 11660 GTTCGACTGGATGGACATGATCTC 11683 >seq27878 Length=10574 Score = 396 bits (438), Expect = 3e-105 Identities = 613/864 (71%), Gaps = 20/864 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| |||||||| |||||||||| | ||||| || || | | ||| Sbjct 1465 GAGCCGTTCCTGGTGGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 1406 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 ||||| |||||||| ||||| ||||| ||||||||||| | ||||||| |||| ||| Sbjct 1405 GTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTG 1346 Query 116696 -TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 | || | | | || ||||||| ||| ||||||||||| || ||||||||| Sbjct 1345 GTGCACGACCTCAAG-GACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGAC 1287 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 |||||||| || ||||| |||||||||||||| || |||||||| |||| | | || Sbjct 1286 GGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTT 1227 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | | | |||||||||||| ||||||| || ||||||||||| || ||||||||||| || Sbjct 1226 CAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGCCATCGA 1167 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | |||||||| |||| ||| ||||||||||||||| | || || Sbjct 1166 GAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGA 1107 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| || || || ||||||||||||||| |||||||| | |||||||| |||| Sbjct 1106 GAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGTGACGAAGAAGGCCCAGTG 1047 Query 116995 GGCGCTGCGCTGGATCG-CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||||| ||| || || || | | | | | | | ||||||||| |||| |||| Sbjct 1046 GGCGCTCAAGTGGTGCGACCCGC-GCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCG 988 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || |||||| ||||||| |||||| ||| | | || || ||||| ||||| | Sbjct 987 CCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGC 928 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || |||||||| |||| ||| |||||||||||| | | |||||||| ||| Sbjct 927 GCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGC 868 Query 117174 ATTGCGACTTTGCCTGTTTGCTG---TTCAAGCATTTGGTG---CAGC-GACCGAGCGCG 117226 | ||||| || || ||||| | ||||| ||||| ||| | | ||| || Sbjct 867 ACACGGACTTCGCGTGCCTGCTGTACTCCAAGC---TGGTGAACAAGCTGCCTGAGAGCC 811 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 ||| || | |||| || |||||||| | |||||||| ||| | ||| Sbjct 810 GCGTGCACC----AGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGAC 755 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 ||||||||||| ||| | || | || | ||| | |||| || ||||||||||| Sbjct 754 TCGCTGCCGGTGGAGCTGATCGGCATGAACT-CGACGCTCATGTGCCAGTACATCGAGTT 696 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 || || ||| | |||||| | | ||| || ||||| ||||||| ||||| Sbjct 695 TGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCC 636 Query 117406 GCTGGACTTTATGAACCTCATCTC 117429 | | |||| ||| || | ||||| Sbjct 635 GTTCGACTGGATGGACATGATCTC 612 >seq27877 Length=1900 Score = 396 bits (438), Expect = 3e-105 Identities = 613/864 (71%), Gaps = 20/864 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| |||||||| |||||||||| | ||||| || || | | ||| Sbjct 1465 GAGCCGTTCCTGGTGGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 1406 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 ||||| |||||||| ||||| ||||| ||||||||||| | ||||||| |||| ||| Sbjct 1405 GTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTG 1346 Query 116696 -TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 | || | | | || ||||||| ||| ||||||||||| || ||||||||| Sbjct 1345 GTGCACGACCTCAAG-GACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGAC 1287 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 |||||||| || ||||| |||||||||||||| || |||||||| |||| | | || Sbjct 1286 GGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTT 1227 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | | | |||||||||||| ||||||| || ||||||||||| || ||||||||||| || Sbjct 1226 CAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGCCATCGA 1167 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | |||||||| |||| ||| ||||||||||||||| | || || Sbjct 1166 GAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGA 1107 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| || || || ||||||||||||||| |||||||| | |||||||| |||| Sbjct 1106 GAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGTGACGAAGAAGGCCCAGTG 1047 Query 116995 GGCGCTGCGCTGGATCG-CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||||| ||| || || || | | | | | | | ||||||||| |||| |||| Sbjct 1046 GGCGCTCAAGTGGTGCGACCCGC-GCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCG 988 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || |||||| ||||||| |||||| ||| | | || || ||||| ||||| | Sbjct 987 CCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGC 928 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || |||||||| |||| ||| |||||||||||| | | |||||||| ||| Sbjct 927 GCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGC 868 Query 117174 ATTGCGACTTTGCCTGTTTGCTG---TTCAAGCATTTGGTG---CAGC-GACCGAGCGCG 117226 | ||||| || || ||||| | ||||| ||||| ||| | | ||| || Sbjct 867 ACACGGACTTCGCGTGCCTGCTGTACTCCAAGC---TGGTGAACAAGCTGCCTGAGAGCC 811 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 ||| || | |||| || |||||||| | |||||||| ||| | ||| Sbjct 810 GCGTGCACC----AGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGAC 755 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 ||||||||||| ||| | || | || | ||| | |||| || ||||||||||| Sbjct 754 TCGCTGCCGGTGGAGCTGATCGGCATGAACT-CGACGCTCATGTGCCAGTACATCGAGTT 696 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 || || ||| | |||||| | | ||| || ||||| ||||||| ||||| Sbjct 695 TGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCC 636 Query 117406 GCTGGACTTTATGAACCTCATCTC 117429 | | |||| ||| || | ||||| Sbjct 635 GTTCGACTGGATGGACATGATCTC 612 >seq26115 Length=10575 Score = 396 bits (438), Expect = 3e-105 Identities = 613/864 (71%), Gaps = 20/864 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| |||||||| |||||||||| | ||||| || || | | ||| Sbjct 9111 GAGCCGTTCCTGGTGGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 9170 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 ||||| |||||||| ||||| ||||| ||||||||||| | ||||||| |||| ||| Sbjct 9171 GTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTG 9230 Query 116696 -TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 | || | | | || ||||||| ||| ||||||||||| || ||||||||| Sbjct 9231 GTGCACGACCTCAAG-GACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGAC 9289 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 |||||||| || ||||| |||||||||||||| || |||||||| |||| | | || Sbjct 9290 GGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTT 9349 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | | | |||||||||||| ||||||| || ||||||||||| || ||||||||||| || Sbjct 9350 CAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGCCATCGA 9409 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | |||||||| |||| ||| ||||||||||||||| | || || Sbjct 9410 GAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGA 9469 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| || || || ||||||||||||||| |||||||| | |||||||| |||| Sbjct 9470 GAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGTGACGAAGAAGGCCCAGTG 9529 Query 116995 GGCGCTGCGCTGGATCG-CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||||| ||| || || || | | | | | | | ||||||||| |||| |||| Sbjct 9530 GGCGCTCAAGTGGTGCGACCCGC-GCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCG 9588 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || |||||| ||||||| |||||| ||| | | || || ||||| ||||| | Sbjct 9589 CCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGC 9648 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || |||||||| |||| ||| |||||||||||| | | |||||||| ||| Sbjct 9649 GCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGC 9708 Query 117174 ATTGCGACTTTGCCTGTTTGCTG---TTCAAGCATTTGGTG---CAGC-GACCGAGCGCG 117226 | ||||| || || ||||| | ||||| ||||| ||| | | ||| || Sbjct 9709 ACACGGACTTCGCGTGCCTGCTGTACTCCAAGC---TGGTGAACAAGCTGCCTGAGAGCC 9765 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 ||| || | |||| || |||||||| | |||||||| ||| | ||| Sbjct 9766 GCGTGCACC----AGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGAC 9821 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTT 117345 ||||||||||| ||| | || | || | ||| | |||| || ||||||||||| Sbjct 9822 TCGCTGCCGGTGGAGCTGATCGGCATGAACT-CGACGCTCATGTGCCAGTACATCGAGTT 9880 Query 117346 CGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCC 117405 || || ||| | |||||| | | ||| || ||||| ||||||| ||||| Sbjct 9881 TGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCC 9940 Query 117406 GCTGGACTTTATGAACCTCATCTC 117429 | | |||| ||| || | ||||| Sbjct 9941 GTTCGACTGGATGGACATGATCTC 9964 >seq32285 Length=18199 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| || ||||| | || || || | | Sbjct 8576 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACGCTAGATGTGGAGCCGTCG 8517 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| | ||| | ||||| | ||||| ||||||||||| | ||||| Sbjct 8516 GACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCA 8458 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| |||| |||||| || | ||||||||| Sbjct 8457 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGAGCGACTACAA 8398 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | || ||||| || ||| |||| || | |||||| Sbjct 8397 CATCCAGAAGGAGTCTACACTGCACCTGGTGCTGCGTCTGCGTGGCGGC 8349 Score = 125 bits (138), Expect = 7e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827 ||| | ||||| | ||||| ||||||||||| | |||||||| || || |||| ||| Sbjct 7814 AAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAGCAGCGTCTGATCTTCGCC 7755 Query 40828 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACG 40887 ||||| |||||||| || | ||||| || | |||||||||||||||||||||| | || Sbjct 7754 GGCAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACA 7695 Query 40888 CTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || ||| |||| || | ||||| Sbjct 7694 CTGCACCTGGTGCTGCGTCTGCGTGGCGG 7666 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 || |||| ||| ||||| |||||||| || | ||||| || | |||||||||||||||| Sbjct 7613 CTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTAAGCGACTACAACATCCAG 7554 Query 40876 AAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||| | || |||||||| ||| |||| Sbjct 7553 AAGGAGTCTACACTGCATCTGGTGCTGCG 7525 >seq30472 Length=20972 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| |||||||| || ||||| ||||||| || | | Sbjct 11993 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCTTCG 11934 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | ||||| | ||||| | ||||| || |||||||| | |||||| Sbjct 11933 GACTCGATCGACAATGTCAAGCAGAAAATCCAAGACAAGGAAGGCATCCCACCTGACCAG 11874 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| |||| || || || | |||||||||| Sbjct 11873 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTAAGCGACTACAAC 11814 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | ||| |||| | ||| |||| Sbjct 11813 ATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCG 11779 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| |||||||| || ||||| | ||||| || | | Sbjct 12221 ATGCAGATTTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTTGACGTGGAGCCTTCG 12162 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| | ||||| | ||||| || || ||||| | ||||| Sbjct 12161 GACTCGATCGACAACG-TCAAGCAGAAAATCCAAGACAAGGAAGGAATCCCGCCTGACCA 12103 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| |||| || || || | ||||||||| Sbjct 12102 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTAAGCGACTACAA 12043 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | ||| |||| | ||| |||| || | || ||| Sbjct 12042 CATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCGTCTGCGCGGTGGC 11994 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||| || ||||| |||||||| || ||||| ||||||| || | Sbjct 12453 AAAGATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCC 12394 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | ||| | | | ||||| | ||||| | || || || |||||||| | || Sbjct 12393 TTCGGACTCGATCGATAATGTCAAGCAGAAAATCCAAGATAAGGAAGGCATCCCGCCTGA 12334 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || || | ||| ||||| |||||||| |||| || || || | |||||| Sbjct 12333 CCAGCAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGCGACTA 12274 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| | ||| |||| | ||| |||| || | || ||| Sbjct 12273 CAACATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCGTCTGCGCGGTGGC 12222 >seq35386 Length=12911 Score = 127 bits (140), Expect = 2e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || ||||| || |||||||| |||| || || | | Sbjct 4558 ATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCCGTCG 4617 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||||| | | | ||||| | ||||| | ||||| || |||||||| | |||||| Sbjct 4618 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGACCAG 4677 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 4678 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 4737 Query 40870 ATCCAGAAGG 40879 |||||||||| Sbjct 4738 ATCCAGAAGG 4747 >seq12976 Length=6227 Score = 127 bits (140), Expect = 2e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || ||||| || |||||||| |||| || || | | Sbjct 3501 ATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCCGTCG 3560 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||||| | | | ||||| | ||||| | ||||| || |||||||| | |||||| Sbjct 3561 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGACCAG 3620 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 3621 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 3680 Query 40870 ATCCAGAAGG 40879 |||||||||| Sbjct 3681 ATCCAGAAGG 3690 >seq25936 Length=21514 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || |||||| | |||||||| || || |||| ||| ||||| ||||| || || | ||| Sbjct 2354 GGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGC 2413 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 || || ||||||||||||||||||||| | || ||||| || ||| | ||| || | Sbjct 2414 ACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTCCGCCTGCGT 2473 Query 40912 GGCGGCGGC 40920 || || ||| Sbjct 2474 GGTGGTGGC 2482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514981374817280