Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq36271 340 2e-88 seq32329 192 5e-44 seq27878 192 5e-44 seq27877 192 5e-44 seq26115 192 5e-44 seq30472 140 3e-28 seq32285 136 4e-27 seq35386 113 4e-20 seq12976 113 4e-20 >seq36271 Length=16985 Score = 340 bits (376), Expect = 2e-88 Identities = 1003/1529 (66%), Gaps = 36/1529 (2%) Strand=Plus/Plus Query 22466 AACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 |||||||| | |||| |||||||| | ||| |||||||| ||| |||| |||| || || Sbjct 1455 AACTCGCCCG-CAAGCACGCGGCGGTTGTACATGTTGGACGTGTACGGCTCGATGGACTC 1513 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 ||||| ||||| || ||||| ||||| || |||||||||||||| | || |||||||| Sbjct 1514 GTTGTTACCCAGGATTTGAGCCGTCGAGGCCGTCGGCATCGGCGCGACGAGCAGCGAGTT 1573 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGAC-- 22642 | | ||||||||| | || ||||||| | | |||||||||||| | || Sbjct 1574 GCGGATGCCGTGCTTAATCACGTTCTGCTTGAGCGTGGCCCAGTCCCACAGCCCCGAATC 1633 Query 22643 -GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 || || || | ||||||| ||| | || || | ||| || || || ||| | Sbjct 1634 AGGGGTGAC---GCCCCACATGTCGAACTGGAAGATGCCCTTGCTGGCAGGAGAGCCCTG 1690 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCT-CGCCTCCAACGCGCCGT 22760 | |||| |||||||| || | ||| | || || | || ||||| | ||| Sbjct 1691 GAACGTCTCGTACGGGCCCAGCTCCTTGGCGATCTC-CATCGACGTCTCCATGGAAGCGT 1749 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCG-GCGACGCTTTCGTACGGC 22819 | || || ||||| ||||| |||||||| | ||| ||| ||| ||| ||| ||| | Sbjct 1750 AGTAAATGGTCTCAAAGATCTTCTTGTTGAGCTCGCGGGCTTGCGG-GCTCTCGAACG-C 1807 Query 22820 ATACGC-ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTT 22878 || | || | | ||||||||| || | |||||||||||| ||||||| || |||| Sbjct 1808 GTAGTCCATGAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATACCGACGGGGCGGTG 1867 Query 22879 TTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTT 22938 || || ||| ||||| | || || || | || || || |||| Sbjct 1868 GCGCATGTTGGACGTGCGCGCCTCCGCCACGGGGTAGTAGTTGACGTCAATGACCTTGTT 1927 Query 22939 CAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGA 22998 || ||| | |||||| | ||||| | | ||| | | ||||| Sbjct 1928 CAGGTTGCGGGTCACCACCTTCGTCACCTCGTACAGCTTGTGGTAGTTGAACACGCCGCC 1987 Query 22999 TTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTT 23058 | | | || |||||| | || | || || || ||||| |||||||||||||| Sbjct 1988 CTCTTCCACGAACTTGGGCAGCGCCACGGACGCCAGGTTGCACACGGCCACCTCGTCAGG 2047 Query 23059 GGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT 23118 |||| |||||| | | || || | ||||| | |||||||||| || Sbjct 2048 CGACGAGTACTCCATGACCTCACAGCACAAGTTGCTCGAGCGGATCGTGCCCAGGTTCTG 2107 Query 23119 CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGAC 23178 |||||| || || ||| ||| |||||| | |||||| ||||| ||||||||| | Sbjct 2108 CTGGTTCGACTTGCGGTTGGCCGAGTCCTTGAACAGCATGAACGGCACGCCCGTCTCAAT 2167 Query 23179 CTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT-GAACACGTCGCACGTACCTGC 23237 ||| | || | ||| | ||||| ||| || | || | | || | | | | Sbjct 2168 CTGGGCGTCCAGGATGGAGAACCACAGCTGCTGCGCTTTGATCGTCTTGCGAGCGCGTCC 2227 Query 23238 CTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGC 23297 || |||| |||||||||| ||||| || || || ||| | || | || ||| || | Sbjct 2228 CTCCTTC-TCGTACTTTTCGTACAGGGCCTCGAACTCGTCGCCCCAGCACTCGTAGAGCC 2286 Query 23298 CGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAA 23357 |||||| | | || || | ||| |||||| ||| ||| ||||| |||| | Sbjct 2287 CGGGCGCCTCGTTGGGGCAGAAGAGGCTCCACTGGCCGTCTGCTTCGACGCGCTTCATGA 2346 Query 23358 AAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGG 23417 | |||||||| | ||| || ||||||||||| ||||| ||||| | ||| |||||| Sbjct 2347 AGAGATCCGGCACCCAGAGCGCGTAGAACAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGT 2406 Query 23418 TGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGG 23477 |||||| || |||| || || |||||||| || ||||| ||||| ||||| | || Sbjct 2407 GGTTCTTCCGCAGGTCCAGGAACTCGAACACGTCGGCGTGCCAGGGCTCCAGGTAGATGG 2466 Query 23478 CAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACA 23537 | |||| ||| | ||| ||||||||| || ||||| || ||||||| ||| ||| Sbjct 2467 CGAACGATCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTATCGTGCCGTGTCGTTAAACA 2526 Query 23538 CTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTT 23597 | | ||||| || | || |||||||| | ||| | | ||| | | | || Sbjct 2527 CACGCAGCATGGGGATGATGCCGTTGGAGGAGCC----ATTCGTGCCGCGAATGTAGCTG 2582 Query 23598 TTGCTCGAACG----TTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653 || ||| ||| ||||| | || || || || || || | || || || | Sbjct 2583 TTCGTCGCACGGATATTGTGCATACTGATGCCAATCCCGCCCGCCCACTTGGAGATACAC 2642 Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713 || || || ||||| |||||||| |||||||| || ||| || | | || | | | Sbjct 2643 GCACACTGCTTCAGTGTGTCGTAAATGCCCTCAATCGAGTCGTCCTGCATGGCCAGGAGG 2702 Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773 || || || || | || | ||||| |||| |||||| || || | |||||| Sbjct 2703 AAGCAGGACGAGAGCTGAGGACGCGGCGTGCCGGCGTTGAACAGCGTGGGCGTCGCGTGC 2762 Query 23774 GT--AAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC-TCT 23830 || ||| ||| | |||||| || | |||||| | | ||||| |||| |||| ||| Sbjct 2763 GTGAAAAACATC--TGCGACATGAGCTCGTACGTCTGCAGAGCGGCCTCAACGTCCGTCT 2820 Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACG 23887 ||| || || | || |||||||| ||||| | || || | || ||||| | Sbjct 2821 -TGTGGATGCCCAGCGCCACGCGCATGATCATCTGCTGCGGGCGCTCCACGACCTT---C 2876 Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947 ||||| | ||| || || || | | ||| || || || || ||||| || | Sbjct 2877 CCGTTGACGCGGAAGAGGTAGCCTCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCG 2936 Query 23948 AAGTCACGATCGTGCACTATGGCCGAATT 23976 ||||| || ||||| | |||||||| || Sbjct 2937 AAGTCCCGGTCGTGGATGATGGCCGAGTT 2965 >seq32329 Length=12294 Score = 192 bits (212), Expect = 5e-44 Identities = 561/843 (67%), Gaps = 32/843 (4%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||||| |||||||| ||||| || || ||||| ||||| | ||| || | || Sbjct 10887 GACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGAT 10946 Query 57627 CTGTCTAAGGATCTGAGCGATTGGG--ATTCCCTCAAAGAATCTGAGAGAAATTTTATTA 57684 ||| | || || | || |||| | | || | || ||| | | || || | Sbjct 10947 CTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAAC--GAGCGTCACTTCATCA 11004 Query 57685 AACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 | ||| ||||||| ||||| || ||| || ||||| |||||||| ||| | | Sbjct 11005 AGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCC--AT 11062 Query 57745 GATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGC 57802 || |||| | || ||||| ||| | ||||| | ||||| ||||| || || | || Sbjct 11063 GAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGC 11122 Query 57803 CATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAA 57862 ||| || ||| | || || || |||| ||||| |||||||| |||||| | |||||| Sbjct 11123 CATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACG- 11181 Query 57863 CGA-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAG 57920 ||| |||||| ||| | ||| ||||| || || || ||| | | |||||| Sbjct 11182 CGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCG-TGACGAAGAAG 11240 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGC-CACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||||| | |||| ||| | | ||| | | | | | | | ||| | || | Sbjct 11241 GCCCAGTGGGCGCTCAAGTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCT 11299 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGC-AGCTTTGCGGCAATATTTTGGA 58038 ||||||||||| || || || || ||||| |||||| | | ||| | || || ||| Sbjct 11300 GGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGC-TCGATCTTCTGGC 11358 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 ||||||| ||||| ||||||||||| |||| || |||||| | || || |||| Sbjct 11359 TGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACG 11418 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| | || || || || |||||||| ||||||| | | || || || | || Sbjct 11419 AGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTCCAAGCTGGTGAACAA---GCTGC 11475 Query 58159 GGGATCGCATCTTGGAC---ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCA 58215 || || | || || ||| | || ||||| | |||||| | ||||| || Sbjct 11476 CTGAGAGCCGCGTGCACCAGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGT 11535 Query 58216 CCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275 ||| | || ||||||| || |||| |||||| | |||| ||||||| | Sbjct 11536 GCGACTCGCTGCCGGTGGAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCG 11595 Query 58276 AGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTC----AT-TACAACAC 58330 ||||||| || ||| | | |||| | ||| |||| | | ||| || |||||| Sbjct 11596 AGTTTGTGGCGGAC---CGTCTGCT-GTACTCGTTGG-GCGTGTCCAAGATCTACAACGT 11650 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || ||||| || | ||| | |||||||||| |||||||||| || || ||||| Sbjct 11651 CAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGA 11710 Query 58391 AAA 58393 || Sbjct 11711 GAA 11713 >seq27878 Length=10574 Score = 192 bits (212), Expect = 5e-44 Identities = 561/843 (67%), Gaps = 32/843 (4%) Strand=Plus/Minus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||||| |||||||| ||||| || || ||||| ||||| | ||| || | || Sbjct 1408 GACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGAT 1349 Query 57627 CTGTCTAAGGATCTGAGCGATTGGG--ATTCCCTCAAAGAATCTGAGAGAAATTTTATTA 57684 ||| | || || | || |||| | | || | || ||| | | || || | Sbjct 1348 CTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAAC--GAGCGTCACTTCATCA 1291 Query 57685 AACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 | ||| ||||||| ||||| || ||| || ||||| |||||||| ||| | | Sbjct 1290 AGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCC--AT 1233 Query 57745 GATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGC 57802 || |||| | || ||||| ||| | ||||| | ||||| ||||| || || | || Sbjct 1232 GAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGC 1173 Query 57803 CATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAA 57862 ||| || ||| | || || || |||| ||||| |||||||| |||||| | |||||| Sbjct 1172 CATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACG- 1114 Query 57863 CGA-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAG 57920 ||| |||||| ||| | ||| ||||| || || || ||| | | |||||| Sbjct 1113 CGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCG-TGACGAAGAAG 1055 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGC-CACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||||| | |||| ||| | | ||| | | | | | | | ||| | || | Sbjct 1054 GCCCAGTGGGCGCTCAAGTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCT 996 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGA 58038 ||||||||||| || || || || ||||| |||||| || ||| | || || ||| Sbjct 995 GGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCT-CGATCTTCTGGC 937 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 ||||||| ||||| ||||||||||| |||| || |||||| | || || |||| Sbjct 936 TGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACG 877 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| | || || || || |||||||| ||||||| | | || || || | || Sbjct 876 AGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTCCAAGCTGGTGAACAA---GCTGC 820 Query 58159 GGGATCGCATCTTGGAC---ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCA 58215 || || | || || ||| | || ||||| | |||||| | ||||| || Sbjct 819 CTGAGAGCCGCGTGCACCAGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGT 760 Query 58216 CCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275 ||| | || ||||||| || |||| |||||| | |||| ||||||| | Sbjct 759 GCGACTCGCTGCCGGTGGAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCG 700 Query 58276 AGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTC----AT-TACAACAC 58330 ||||||| || ||| | | |||| | ||| |||| | | ||| || |||||| Sbjct 699 AGTTTGTGGCGGAC---CGTCTGCT-GTACTCGTTGG-GCGTGTCCAAGATCTACAACGT 645 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || ||||| || | ||| | |||||||||| |||||||||| || || ||||| Sbjct 644 CAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGA 585 Query 58391 AAA 58393 || Sbjct 584 GAA 582 >seq27877 Length=1900 Score = 192 bits (212), Expect = 5e-44 Identities = 561/843 (67%), Gaps = 32/843 (4%) Strand=Plus/Minus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||||| |||||||| ||||| || || ||||| ||||| | ||| || | || Sbjct 1408 GACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGAT 1349 Query 57627 CTGTCTAAGGATCTGAGCGATTGGG--ATTCCCTCAAAGAATCTGAGAGAAATTTTATTA 57684 ||| | || || | || |||| | | || | || ||| | | || || | Sbjct 1348 CTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAAC--GAGCGTCACTTCATCA 1291 Query 57685 AACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 | ||| ||||||| ||||| || ||| || ||||| |||||||| ||| | | Sbjct 1290 AGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCC--AT 1233 Query 57745 GATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGC 57802 || |||| | || ||||| ||| | ||||| | ||||| ||||| || || | || Sbjct 1232 GAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGC 1173 Query 57803 CATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAA 57862 ||| || ||| | || || || |||| ||||| |||||||| |||||| | |||||| Sbjct 1172 CATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACG- 1114 Query 57863 CGA-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAG 57920 ||| |||||| ||| | ||| ||||| || || || ||| | | |||||| Sbjct 1113 CGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCG-TGACGAAGAAG 1055 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGC-CACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||||| | |||| ||| | | ||| | | | | | | | ||| | || | Sbjct 1054 GCCCAGTGGGCGCTCAAGTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCT 996 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGA 58038 ||||||||||| || || || || ||||| |||||| || ||| | || || ||| Sbjct 995 GGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCT-CGATCTTCTGGC 937 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 ||||||| ||||| ||||||||||| |||| || |||||| | || || |||| Sbjct 936 TGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACG 877 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| | || || || || |||||||| ||||||| | | || || || | || Sbjct 876 AGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTCCAAGCTGGTGAACAA---GCTGC 820 Query 58159 GGGATCGCATCTTGGAC---ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCA 58215 || || | || || ||| | || ||||| | |||||| | ||||| || Sbjct 819 CTGAGAGCCGCGTGCACCAGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGT 760 Query 58216 CCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275 ||| | || ||||||| || |||| |||||| | |||| ||||||| | Sbjct 759 GCGACTCGCTGCCGGTGGAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCG 700 Query 58276 AGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTC----AT-TACAACAC 58330 ||||||| || ||| | | |||| | ||| |||| | | ||| || |||||| Sbjct 699 AGTTTGTGGCGGAC---CGTCTGCT-GTACTCGTTGG-GCGTGTCCAAGATCTACAACGT 645 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || ||||| || | ||| | |||||||||| |||||||||| || || ||||| Sbjct 644 CAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGA 585 Query 58391 AAA 58393 || Sbjct 584 GAA 582 >seq26115 Length=10575 Score = 192 bits (212), Expect = 5e-44 Identities = 561/843 (67%), Gaps = 32/843 (4%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||| | ||||| |||||||| ||||| || || ||||| ||||| | ||| || | || Sbjct 9168 GACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGAT 9227 Query 57627 CTGTCTAAGGATCTGAGCGATTGGG--ATTCCCTCAAAGAATCTGAGAGAAATTTTATTA 57684 ||| | || || | || |||| | | || | || ||| | | || || | Sbjct 9228 CTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAAC--GAGCGTCACTTCATCA 9285 Query 57685 AACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAA 57744 | ||| ||||||| ||||| || ||| || ||||| |||||||| ||| | | Sbjct 9286 AGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCC--AT 9343 Query 57745 GATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGC 57802 || |||| | || ||||| ||| | ||||| | ||||| ||||| || || | || Sbjct 9344 GAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCGC 9403 Query 57803 CATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAA 57862 ||| || ||| | || || || |||| ||||| |||||||| |||||| | |||||| Sbjct 9404 CATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACG- 9462 Query 57863 CGA-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAG 57920 ||| |||||| ||| | ||| ||||| || || || ||| | | |||||| Sbjct 9463 CGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCG-TGACGAAGAAG 9521 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGC-CACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||||| | |||| ||| | | ||| | | | | | | | ||| | || | Sbjct 9522 GCCCAGTGGGCGCTCAAGTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCT 9580 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGC-AGCTTTGCGGCAATATTTTGGA 58038 ||||||||||| || || || || ||||| |||||| | | ||| | || || ||| Sbjct 9581 GGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGC-TCGATCTTCTGGC 9639 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 ||||||| ||||| ||||||||||| |||| || |||||| | || || |||| Sbjct 9640 TGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACG 9699 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC 58158 |||| | || || || || |||||||| ||||||| | | || || || | || Sbjct 9700 AGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTCCAAGCTGGTGAACAA---GCTGC 9756 Query 58159 GGGATCGCATCTTGGAC---ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCA 58215 || || | || || ||| | || ||||| | |||||| | ||||| || Sbjct 9757 CTGAGAGCCGCGTGCACCAGATTGTGCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGT 9816 Query 58216 CCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275 ||| | || ||||||| || |||| |||||| | |||| ||||||| | Sbjct 9817 GCGACTCGCTGCCGGTGGAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCG 9876 Query 58276 AGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTC----AT-TACAACAC 58330 ||||||| || ||| | | |||| | ||| |||| | | ||| || |||||| Sbjct 9877 AGTTTGTGGCGGAC---CGTCTGCT-GTACTCGTTGG-GCGTGTCCAAGATCTACAACGT 9931 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || ||||| || | ||| | |||||||||| |||||||||| || || ||||| Sbjct 9932 CAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGA 9991 Query 58391 AAA 58393 || Sbjct 9992 GAA 9994 >seq30472 Length=20972 Score = 140 bits (154), Expect = 3e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 || |||| ||||| || ||||| ||||| ||||| ||||| |||||||| ||||||| | Sbjct 12457 AAGCAAAGATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGG 12398 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | || || ||| |||| | ||||| |||| ||| || ||||||||| | |||| Sbjct 12397 AGCCTTCGGACTCGATCGATAATGTCAAGCAGAAAATCCAAGATAAGGAAGGCATCCCGC 12338 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 | |||||||||||||| || ||||| ||||| ||| |||| ||| | || |||||| Sbjct 12337 CTGACCAGCAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGCG 12278 Query 31365 ATTATAACATTCAAAAAGAATCGAC 31389 | || ||||| || || || || || Sbjct 12277 ACTACAACATCCAGAAGGAGTCAAC 12253 Score = 132 bits (146), Expect = 4e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| |||||||| ||||||| || || || Sbjct 11994 CATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCTTC 11935 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | ||||| |||| ||| |||||||||||| | || || ||||| Sbjct 11934 GGACTCGATCGACAATGTCAAGCAGAAAATCCAAGACAAGGAAGGCATCCCACCTGACCA 11875 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| | || | ||||| || || Sbjct 11874 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTAAGCGACTACAA 11815 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| || || || || || Sbjct 11814 CATCCAGAAGGAGTCAAC 11797 Score = 132 bits (146), Expect = 4e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| ||||| ||||| |||||||| | ||||| || || || Sbjct 12222 CATGCAGATTTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTTGACGTGGAGCCTTC 12163 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | ||||| |||| ||| ||||||||||| | ||||| ||||| Sbjct 12162 GGACTCGATCGACAACGTCAAGCAGAAAATCCAAGACAAGGAAGGAATCCCGCCTGACCA 12103 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| | || | ||||| || || Sbjct 12102 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTAAGCGACTACAA 12043 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| || || || || || Sbjct 12042 CATCCAGAAGGAGTCAAC 12025 >seq32285 Length=18199 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| |||| ||||| |||||||| | || || || ||||| Sbjct 8577 CATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACGCTAGATGTGGAGCCGTC 8518 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| ||| |||||||| ||| | ||||| ||||| Sbjct 8517 GGACTCGATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCA 8458 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| || ||||||| || || Sbjct 8457 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGAGCGACTACAA 8398 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || || ||||| || | ||| | ||||| Sbjct 8397 CATCCAGAAGGAGTCTACACTGCACCTGGTGCTGCGTCTGCGTGGCGG 8350 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 31241 GTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTG 31300 || || ||||| ||| |||| | || || |||| ||| |||||||| ||| | Sbjct 7844 GTGGAGCCGTCGGACTCGATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATC 7785 Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATG 31360 ||||| |||||||||||||| || ||||| ||||| ||| |||| || || || Sbjct 7784 CCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTG 7725 Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || ||||| || || || || || || || ||||| || | ||| | ||||| Sbjct 7724 AGCGACTACAACATCCAGAAGGAGTCTACACTGCACCTGGTGCTGCGTCTGCGTGGCGG 7666 >seq35386 Length=12911 Score = 113 bits (124), Expect = 4e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || || || ||||| || || || ||||| |||| || || || Sbjct 4554 AATCATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCC 4613 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||| ||||| | || | ||||| |||| ||| ||||||||||||| | ||||| || Sbjct 4614 GTCGGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGA 4673 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || || ||||| ||||| ||| | || ||| Sbjct 4674 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 4713 >seq12976 Length=6227 Score = 113 bits (124), Expect = 4e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || || || ||||| || || || ||||| |||| || || || Sbjct 3497 AATCATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCC 3556 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||| ||||| | || | ||||| |||| ||| ||||||||||||| | ||||| || Sbjct 3557 GTCGGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGA 3616 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || || ||||| ||||| ||| | || ||| Sbjct 3617 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 3656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445560634229760