Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq34995 96.9 2e-15 >seq34995 Length=13572 Score = 96.9 bits (106), Expect = 2e-15 Identities = 122/165 (74%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 33556 CGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGG 33614 ||||| || || || || |||| ||||||||||| || ||| |||||| | ||||||| Sbjct 4914 CGCAACATTCGGATCCCGCAGATTGGCGACAAGTTCGCCTCGCGTCACGGAC-AGAAGGG 4856 Query 33615 CACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCC 33674 |||| ||| |||| |||| || |||||||||||||||| || ||| | || Sbjct 4855 CACGATCGGGATGACGTACCGGCAAGAAGACATGCCGTTCACGGTGGAGGGCATTACGCC 4796 Query 33675 GGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 || | ||| |||||||||| || | || ||||| |||||||| Sbjct 4795 CGATATCGTCGTCAACCCGCACGCCATTCCGTCGCGTATGACGGT 4751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356073273505984