Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq32329 217 2e-51 seq27878 217 2e-51 seq27877 217 2e-51 seq26115 217 2e-51 seq36271 154 2e-32 seq31550 107 3e-18 >seq32329 Length=12294 Score = 217 bits (240), Expect = 2e-51 Identities = 592/890 (67%), Gaps = 40/890 (4%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| | | || ||| | ||| | |||||||| ||||| |||| || || Sbjct 10866 CTGTTCCCGATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTC 10925 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| ||| | |||||| | ||||| | || |||| | | ||| | Sbjct 10926 TGGACGGCCGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAAT---TTGTCG 10982 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | || || | | |||| ||||| || | | ||| || || Sbjct 10983 GACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATT 11042 Query 125175 GTCAACGACAATCTGTTGACACGA--TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232 || ||||| || ||| | || || ||| | | ||| || | || |||| | Sbjct 11043 GTGAACGAGAACCTG--GCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCT 11100 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| ||| || |||||| | |||||||| ||||||| || | Sbjct 11101 GCTTCTACGGGTTCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCA 11160 Query 125293 TTGACATGTACATT-----CGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGA 125347 | |||| |||||| ||||||| || | | ||| |||| ||| ||||| Sbjct 11161 TCGACACGTACATCAAGGACGCGATCGAGAAGG--ACCACCTGCTGCG---CGCCATCGA 11215 Query 125348 CACGGTGCCGTCTAT-ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACA 125406 ||| | |||| | ||| || ||||| || |||| | | |||| ||| | Sbjct 11216 GACGATCCCGTGCGTGACG-AAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCG 11274 Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 ||| || ||| | || | ||| |||| |||||||| || |||||||||||||| |||| Sbjct 11275 TGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGG 11334 Query 125467 G-TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCAC 125525 | | ||| ||| | ||||| ||||| ||||||||||| || |||||||| |||| | Sbjct 11335 GCTCGTTCTGC-TCGATCTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTC 11393 Query 125526 AGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 |||||| | || || ||||||||| | ||| ||||| || || |||| Sbjct 11394 TCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGT-- 11451 Query 125586 CGCAACTATCTGCGTCCCGAG-TGC---AGATCCAGCGATGAAAAGGTCATCAACATTGT 125641 | | | ||| | || ||| ||| || ||| || | | | ||||| Sbjct 11452 -ACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCC-GCG-TGCA--------CCAGATTGT 11500 Query 125642 AACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT-CAGCATGA 125700 || || ||| ||| || || ||||| | ||| || || ||||| ||| ||| Sbjct 11501 GCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTGGAGC-TGA 11559 Query 125701 TTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGT 125760 | |||||||||| | ||| |||||| ||||||| ||||||||||| || ||||| |||| Sbjct 11560 TCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGT 11619 Query 125761 ACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820 || |||| | |||||| ||||||| |||||| || || || | ||| || | Sbjct 11620 ACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGATGGACATGA 11679 Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | || || |||| |||||||| || ||||||||| || |||||||| Sbjct 11680 TCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTAC 11729 >seq27878 Length=10574 Score = 217 bits (240), Expect = 2e-51 Identities = 592/890 (67%), Gaps = 40/890 (4%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| | | || ||| | ||| | |||||||| ||||| |||| || || Sbjct 1429 CTGTTCCCGATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTC 1370 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| ||| | |||||| | ||||| | || |||| | | ||| | Sbjct 1369 TGGACGGCCGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAAT---TTGTCG 1313 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | || || | | |||| ||||| || | | ||| || || Sbjct 1312 GACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATT 1253 Query 125175 GTCAACGACAATCTGTTGACACGA--TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232 || ||||| || ||| | || || ||| | | ||| || | || |||| | Sbjct 1252 GTGAACGAGAACCTG--GCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCT 1195 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| ||| || |||||| | |||||||| ||||||| || | Sbjct 1194 GCTTCTACGGGTTCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCA 1135 Query 125293 TTGACATGTACATT-----CGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGA 125347 | |||| |||||| ||||||| || | | ||| |||| ||| ||||| Sbjct 1134 TCGACACGTACATCAAGGACGCGATCGAGAAGG--ACCACCTGCTGCG---CGCCATCGA 1080 Query 125348 CACGGTGCCGTCTAT-ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACA 125406 ||| | |||| | ||| || ||||| || |||| | | |||| ||| | Sbjct 1079 GACGATCCCGTGCGTGACG-AAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCG 1021 Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 ||| || ||| | || | ||| |||| |||||||| || |||||||||||||| |||| Sbjct 1020 TGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGG 961 Query 125467 G-TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCAC 125525 | | ||| ||| | ||||| ||||| ||||||||||| || |||||||| |||| | Sbjct 960 GCTCGTTCTGC-TCGATCTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTC 902 Query 125526 AGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 |||||| | || || ||||||||| | ||| ||||| || || |||| Sbjct 901 TCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGT-- 844 Query 125586 CGCAACTATCTGCGTCCCGAG-TGC---AGATCCAGCGATGAAAAGGTCATCAACATTGT 125641 | | | ||| | || ||| ||| || ||| || | | | ||||| Sbjct 843 -ACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCC-GCG-TGCA--------CCAGATTGT 795 Query 125642 AACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT-CAGCATGA 125700 || || ||| ||| || || ||||| | ||| || || ||||| ||| ||| Sbjct 794 GCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTGGAGC-TGA 736 Query 125701 TTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGT 125760 | |||||||||| | ||| |||||| ||||||| ||||||||||| || ||||| |||| Sbjct 735 TCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGT 676 Query 125761 ACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820 || |||| | |||||| ||||||| |||||| || || || | ||| || | Sbjct 675 ACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGATGGACATGA 616 Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | || || |||| |||||||| || ||||||||| || |||||||| Sbjct 615 TCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTAC 566 >seq27877 Length=1900 Score = 217 bits (240), Expect = 2e-51 Identities = 592/890 (67%), Gaps = 40/890 (4%) Strand=Plus/Minus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| | | || ||| | ||| | |||||||| ||||| |||| || || Sbjct 1429 CTGTTCCCGATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTC 1370 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| ||| | |||||| | ||||| | || |||| | | ||| | Sbjct 1369 TGGACGGCCGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAAT---TTGTCG 1313 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | || || | | |||| ||||| || | | ||| || || Sbjct 1312 GACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATT 1253 Query 125175 GTCAACGACAATCTGTTGACACGA--TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232 || ||||| || ||| | || || ||| | | ||| || | || |||| | Sbjct 1252 GTGAACGAGAACCTG--GCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCT 1195 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| ||| || |||||| | |||||||| ||||||| || | Sbjct 1194 GCTTCTACGGGTTCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCA 1135 Query 125293 TTGACATGTACATT-----CGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGA 125347 | |||| |||||| ||||||| || | | ||| |||| ||| ||||| Sbjct 1134 TCGACACGTACATCAAGGACGCGATCGAGAAGG--ACCACCTGCTGCG---CGCCATCGA 1080 Query 125348 CACGGTGCCGTCTAT-ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACA 125406 ||| | |||| | ||| || ||||| || |||| | | |||| ||| | Sbjct 1079 GACGATCCCGTGCGTGACG-AAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCG 1021 Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 ||| || ||| | || | ||| |||| |||||||| || |||||||||||||| |||| Sbjct 1020 TGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGG 961 Query 125467 G-TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCAC 125525 | | ||| ||| | ||||| ||||| ||||||||||| || |||||||| |||| | Sbjct 960 GCTCGTTCTGC-TCGATCTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTC 902 Query 125526 AGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 |||||| | || || ||||||||| | ||| ||||| || || |||| Sbjct 901 TCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGT-- 844 Query 125586 CGCAACTATCTGCGTCCCGAG-TGC---AGATCCAGCGATGAAAAGGTCATCAACATTGT 125641 | | | ||| | || ||| ||| || ||| || | | | ||||| Sbjct 843 -ACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCC-GCG-TGCA--------CCAGATTGT 795 Query 125642 AACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT-CAGCATGA 125700 || || ||| ||| || || ||||| | ||| || || ||||| ||| ||| Sbjct 794 GCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTGGAGC-TGA 736 Query 125701 TTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGT 125760 | |||||||||| | ||| |||||| ||||||| ||||||||||| || ||||| |||| Sbjct 735 TCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGT 676 Query 125761 ACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820 || |||| | |||||| ||||||| |||||| || || || | ||| || | Sbjct 675 ACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGATGGACATGA 616 Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | || || |||| |||||||| || ||||||||| || |||||||| Sbjct 615 TCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTAC 566 >seq26115 Length=10575 Score = 217 bits (240), Expect = 2e-51 Identities = 592/890 (67%), Gaps = 40/890 (4%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| | | || ||| | ||| | |||||||| ||||| |||| || || Sbjct 9147 CTGTTCCCGATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTC 9206 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||||| ||| ||| | |||||| | ||||| | || |||| | | ||| | Sbjct 9207 TGGACGGCCGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAAT---TTGTCG 9263 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | || || | | |||| ||||| || | | ||| || || Sbjct 9264 GACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATT 9323 Query 125175 GTCAACGACAATCTGTTGACACGA--TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232 || ||||| || ||| | || || ||| | | ||| || | || |||| | Sbjct 9324 GTGAACGAGAACCTG--GCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCT 9381 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| ||||| ||| || |||||| | |||||||| ||||||| || | Sbjct 9382 GCTTCTACGGGTTCCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTCA 9441 Query 125293 TTGACATGTACATT-----CGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGA 125347 | |||| |||||| ||||||| || | | ||| |||| ||| ||||| Sbjct 9442 TCGACACGTACATCAAGGACGCGATCGAGAAGG--ACCACCTGCTGCG---CGCCATCGA 9496 Query 125348 CACGGTGCCGTCTAT-ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACA 125406 ||| | |||| | ||| || ||||| || |||| | | |||| ||| | Sbjct 9497 GACGATCCCGTGCGTGACG-AAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCG 9555 Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 ||| || ||| | || | ||| |||| |||||||| || |||||||||||||| |||| Sbjct 9556 TGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGG 9615 Query 125467 G-TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCAC 125525 | | ||| ||| | ||||| ||||| ||||||||||| || |||||||| |||| | Sbjct 9616 GCTCGTTCTGC-TCGATCTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTC 9674 Query 125526 AGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 |||||| | || || ||||||||| | ||| ||||| || || |||| Sbjct 9675 TCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGT-- 9732 Query 125586 CGCAACTATCTGCGTCCCGAG-TGC---AGATCCAGCGATGAAAAGGTCATCAACATTGT 125641 | | | ||| | || ||| ||| || ||| || | | | ||||| Sbjct 9733 -ACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCC-GCG-TGCA--------CCAGATTGT 9781 Query 125642 AACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT-CAGCATGA 125700 || || ||| ||| || || ||||| | ||| || || ||||| ||| ||| Sbjct 9782 GCGTGACGCGGTGGTGATCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTGGAGC-TGA 9840 Query 125701 TTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGT 125760 | |||||||||| | ||| |||||| ||||||| ||||||||||| || ||||| |||| Sbjct 9841 TCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGT 9900 Query 125761 ACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820 || |||| | |||||| ||||||| |||||| || || || | ||| || | Sbjct 9901 ACTCGTTGGGCGTGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGATGGACATGA 9960 Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 | || || |||| |||||||| || ||||||||| || |||||||| Sbjct 9961 TCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTAC 10010 >seq36271 Length=16985 Score = 154 bits (170), Expect = 2e-32 Identities = 353/525 (67%), Gaps = 10/525 (2%) Strand=Plus/Minus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||||||||| ||||||||| || || || | | ||| ||||| |||| | Sbjct 2511 CACGATACGTGGACCAGGGCGGCGGCAAGCGCAAGGGATCGTTCGCCATCTACCTGGAGC 2452 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | |||||||| ||||| || || || | || |||| || ||| ||| || | | Sbjct 2451 CCTGGCACGCCGACGTGTTCGAGTTCCTGGACCTGCGGAAGAACCACGGCAACGA-GCTG 2393 Query 96982 CAC-GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC 97040 ||| | || | ||| |||| || || ||||||||||| ||| | ||||||||||||||| Sbjct 2392 CACCGCGCGCGCGACCTGTTCTACGCGCTCTGGGTGCCGGATCTCTTCATGAAGCGCGTC 2333 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 | | | ||| | |||||||| | |||||| || | | ||||| || | ||| ||| Sbjct 2332 GAAGCAGACGGCCAGTGGAGCCTCTTCTGCCCCAACGAGGCGCCCGGGCTCTACGAGTGC 2273 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAG 97159 |||||||| ||||| |||||| |||| |||||| | ||||| || || || Sbjct 2272 TGGGGCGACGAGTTCGAGGCCCTGTACGAAAAGTACGAGAAGGAGGGACGCGCTCGCAAG 2213 Query 97160 ACGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219 |||| || | || | | |||||| ||||| || || ||| | ||||| || Sbjct 2212 ACGA-TCAAAGCGCAGCAGCTGTGGTTCTCCATCCTGGACGCCCAGATTGAGACGGGCGT 2154 Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279 |||| ||| || | |||||| | | || ||||| ||||| | || ||||||| Sbjct 2153 GCCGTTCATGCTGTTCAAGGACTCGGCCAACCGCAAGTCGAACCAGCAGAACCTGGGCAC 2094 Query 97280 CATCAAGGGCTC---CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGAC 97336 ||| |||| ||| ||||| || | | |||||| | || || |||||| Sbjct 2093 GATC---CGCTCGAGCAACTTGTGCTGTGAGGTCATGGAGTACTCGTCGCCTGACGAGGT 2037 Query 97337 GGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 ||| || ||| ||||| || || ||||||||||| || || Sbjct 2036 GGCCGTGTGCAACCTGGCGTCCGTGGCGCTGCCCAAGTTCGTGGA 1992 Score = 102 bits (112), Expect = 1e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099 |||||||| || |||||||| | |||||| || | || | | |||||| | || Sbjct 1318 TACAAGACGGTGTGGGAGATCAAGCAGAAGACGGTGTTGGACCTCTCGGCCGACCGCGGC 1259 Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159 | ||||||| |||||| || ||| |||| | || | ||||| || ||| ||| Sbjct 1258 GCCTACATTTGCCAGAGCCAGTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAG 1199 Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTA 98215 | || || || ||||| ||||| ||||| ||||| |||||||||||||||||||| Sbjct 1198 CTCACATCCATGCACTTCTACGCCTGGAAAAAGGGGCTCAAGACGGGCATGTACTA 1143 >seq31550 Length=24914 Score = 107 bits (118), Expect = 3e-18 Identities = 215/317 (68%), Gaps = 4/317 (1%) Strand=Plus/Minus Query 127443 GAATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGG 127502 ||| ||||| || ||||| ||||| |||||| ||||| |||||||| | ||||||| Sbjct 18605 GAAGCCGTGGGTGAGGTGACCTCCAGAGGGCAGGTCGAGCCCCATGATGCGGTCGTGCGG 18546 Query 127503 TTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACA 127562 | | | ||||| |||||||||||||| ||||||||||||||| || ||| Sbjct 18545 GCGCAGCAGCGCCGTGTAGACGGCAAAGTTGGCAGGCGAGCCCGAGTACGGCTGCACATT 18486 Query 127563 CACTCCCCATTCGGACTCGTTCAAATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCAG 127622 || ||||| | | ||| | | | | || |||| |||| ||| |||| Sbjct 18485 GACGCCCCACTTGTCCTCCTCGAGGCCGTAGGCCGTGAGCGCGCGCTTCTGGCACAGCAT 18426 Query 127623 TTCGATGCGATCGATAAACTCGTTACCACCATAGTA--TCGCTTTCCGGGCCTACCCTCC 127680 ||||| || || | |||||| || || ||||| ||| ||| ||| ||||| Sbjct 18425 CTCGATCTTGTCAATGACCTCGTTGCCGCCGTAGTAGCGCGCGTTC--GGCAGGCCCTCG 18368 Query 127681 GAGTACTTGTTGATGAGACACGAACTCATGCATTCTCGCACCGGTAGAGTGGTAAAGTTT 127740 | |||||||||| |||| ||||| | || ||| || || | | | || ||||| Sbjct 18367 GCGTACTTGTTGGTGAGGCACGAGCCCAGGCAGTCCATGACGGCGCGCGACGTGAAGTTC 18308 Query 127741 TCCGATGCGATCAACTC 127757 ||||| ||||| | ||| Sbjct 18307 TCCGACGCGATGAGCTC 18291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740717127073280