Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq36590 140 3e-28 >seq36590 Length=19788 Score = 140 bits (154), Expect = 3e-28 Identities = 139/178 (78%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 5591 ATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA--GTTGA 5648 || |||||||| | ||||| || ||| || ||| || | | ||||| ||||| Sbjct 15206 ATAAGCTGCGCCACGCGGTCCCCGCGCTTGACGGGGAAGTCCTCG--GCCGAGTGGTTGA 15263 Query 5649 ACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGA 5708 |||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 15264 ACAGGATGACGCCCACGTTGCCGCGGTAGTCGGCGTCGATCACGCCCGCGCCCGTGTCGA 15323 Query 5709 TGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATCGGG 5766 |||| | ||||| ||||| || ||||| || ||||| ||| ||||||| || || || Sbjct 15324 TGAACTTCTTGAGCGCCAACCCAGAGCGCGGCGCCACACGGGCGTAGCAGCCCTCCGG 15381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429860849716736