Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq30005 190 4e-43 seq32329 187 5e-42 seq27878 187 5e-42 seq27877 187 5e-42 seq26115 187 5e-42 seq22780 118 2e-21 seq17832 118 2e-21 seq23663 96.9 7e-15 seq18512 96.9 7e-15 seq8249 96.9 7e-15 seq4095 96.9 7e-15 seq33704 93.3 9e-14 seq16124 93.3 9e-14 seq31089 91.5 3e-13 seq4570 91.5 3e-13 seq1946 91.5 3e-13 >seq30005 Length=11534 Score = 190 bits (210), Expect = 4e-43 Identities = 450/670 (67%), Gaps = 40/670 (6%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || |||||||||||||||||||| |||| || | || ||||| || | | ||||| Sbjct 1801 CTTTCGGGTGGTTGGAAGATGAAACTGGAGCTGGCCCGTGCCATGCTGCAGAAGGCCGAC 1742 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 |||| |||||||||||||| || |||||| |||| |||||| || ||||| | | Sbjct 1741 ATCCTGCTGCTTGATGAGCCCACGAACCACTTGGATGTGCACAACGTCGCGTGGCTGGAG 1682 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| || || || | || || | || |||| || || ||||||||||||||| Sbjct 1681 AACTACCTGACGAGCCTCACCAACGTGACGTCGATCATGGTGTCCCACGACTCTGGCTTC 1622 Query 279885 CTAGATGCCGTGTGCTCTGC---CATCATTCACTATGAG---CAAAATCTGAAGCTCTCC 279938 || || | ||||| | | |||||| ||||| ||| | || || ||| ||| | Sbjct 1621 CTGGA---CACGTGCTGTACCAACATCATCCACTACGAGACCCGCAAGCTCAAGATCTAC 1565 Query 279939 AAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTAT 279998 ||| |||||||||||||||||||| | || || |||||| |||||||| Sbjct 1564 AAG------GGCAACCTGTCTGCTTTCGTAGAGCAGAAGCCCGAGGCGAAGGCCTACTAC 1511 Query 279999 GACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATC 280058 || || || | || || ||||| ||||| ||||| || || || | | |||| Sbjct 1510 GAACTCGAGTCGGACAACGTCAAGTTCACGTTCCCGGAGCCTGGTTTCCTTGCCGACATC 1451 Query 280059 -ACATCAAAGGATCGCGCAATCAT--------GAAGCT--CCGTGGCGTCTCCTTTGCTT 280107 | | ||| || || | ||||| || || ||| | || | || Sbjct 1450 AAGAACAAGGGCAAGC-CCATCATTCGTCTGACAAACTGCTCGTACCAGTACCCTGGC-- 1394 Query 280108 ATCCCAATGGCCCCAA-CATCTTCAGCAGTGTCAACT-CGCAGGTTTCTAT-GAACTCAC 280164 | || | | | ||| || | || | ||| | | ||| ||| | || | | Sbjct 1393 ACGCCCAAGCCGTCAATCAACAACATCTCTGTGACGTGCGC-----TCTGTCGAGC---C 1342 Query 280165 GGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTG 280224 | || | || | || ||||| ||||| || ||||| || || ||||| | ||||| | Sbjct 1341 GTATCGCCGTGCTCGGCCCCAACGGTGCCGGCAAGTCGACGCTGATCAAGATGCTGACGG 1282 Query 280225 GCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACG 280284 | ||| || |||| || ||||||||||| || |||||| | ||||||| Sbjct 1281 GTGAGGTGGAGCCCACGTCTGGCCAGGTTTGGAAGCACCCTTCCATGCGTTTCGCTTACG 1222 Query 280285 TCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACA 280344 ||||||||||||||||||||||||| ||| ||||||||| ||| | ||||| |||| Sbjct 1221 TCGCTCAGCACGCTTTCCACCACATTGAGTCGCACCTGGACGAGACGGCCAACCAGTACA 1162 Query 280345 TTCAGTGGCG 280354 | |||||||| Sbjct 1161 TCCAGTGGCG 1152 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 279361 ACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACA 279420 ||||||| ||||||||||| || ||||| | ||||||||| ||| |||| || | Sbjct 2142 ACTGTGAGTTCTCGCTCGCCTACGGTGGTATGATTCTGCTGAACAACGCCCGTCTTCGCC 2083 Query 279421 TCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAA 279480 ||||||||||| |||| || ||||| ||| ||||| ||| || ||| || || | Sbjct 2082 TCAAGCGTGGCCACCGTTACGGTCTGTGCGGCCCCAACGGATGTGGCAAGTCGACGCTGA 2023 Query 279481 TGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCC 279517 |||||||||| | ||||| ||||| || || || || Sbjct 2022 TGCGCGCCATCTCCAACGGCCAGCTCGAGGGCTTCCC 1986 >seq32329 Length=12294 Score = 187 bits (206), Expect = 5e-42 Identities = 562/855 (66%), Gaps = 17/855 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||||||||| | |||||||| ||| ||||| | ||||| ||||||| ||||| || Sbjct 11710 TCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATCCAGTCGAACGGGTTCTTG 11651 Query 251623 GCATTGTACTGCTTGGG-ATGGCCAAGTGCTAC-GAAGATGCGGTCTGCCACAAACTCCA 251680 | ||||| ||||| | | |||| ||| | ||| ||||| ||||||||||| | Sbjct 11650 ACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGA--CGGTCCGCCACAAACTCGA 11593 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAG 251739 ||||| | ||| || ||||||||||| |||| | || || | | || || Sbjct 11592 TGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCACC-GGCAGCGAGTCGCAC 11534 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGAC 251799 | ||| || | ||| | | || || || |||||| | ||| | | || | Sbjct 11533 ACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTGCACGCGGCTCTCAGGC 11474 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAA-CTGTTGGTGCAGACCCTCGT 251857 ||||||||| ||||||| |||||||| || | ||| || | || ||||| ||||||| Sbjct 11473 AGCTTGTTCACCAGCTTGGAGTACAGCAGGCACGCGAAGTCCGT--GTGCATGCCCTCGT 11416 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || ||||||| |||||| || | | ||| || ||||||| ||| || ||| | |||| Sbjct 11415 CACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATCAGCCCGCGCTTCTTCAGCC 11356 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | ||| || || || ||||| | | ||||| ||| | | || | | Sbjct 11355 AGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCGGCGAACGCCAGCA 11296 Query 251978 GGCGCTCAG---CAAACGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCT 252034 ||||||| | | ||||| | | | | |||| | ||||| ||||||| Sbjct 11295 GGCGCTCCGGGTAAGACGACACGCGCGGGTCGCACCACTTGAGCGCCCACTGGGCCTTCT 11236 Query 252035 TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCT 252094 | || ||||| || ||||| || | || || | |||| |||||| Sbjct 11235 TCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGGTGGTCCTTCTCGATCGCGTCCT 11176 Query 252095 CGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCT 252154 |||| || || | || || ||||||| |||||| |||||| ||| || |||| Sbjct 11175 TGATGTACGTGTCGATGAGCAGCGAGTACACCTCCGAGTGGATGTTCTCGATGGCGATCT 11116 Query 252155 GGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214 || | | ||||| || || || | || || | ||||| | || | Sbjct 11115 GGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGCACCTCGTTACTGAAGTTCATGGCCA 11056 Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGT 252274 |||||| |||| ||||| |||||| | || ||||| | || | ||||||||||||| Sbjct 11055 GGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAGAACGCCAGCACCGTCTTGATGAAGT 10996 Query 252275 GACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTT 252334 ||||||| | ||| | ||| | |||||| | ||| || |||| | | Sbjct 10995 GACGCTCGTTGTCCGACAAATTGGC---CCAGTCCTTGAGGTCGTGCACCAGATCCAGCT 10939 Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGGTACT 252394 | || |||||||||| | | | |||||||||||||||| |||| || | | || Sbjct 10938 CCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTACATCTTCCACACGTCGTGCTCCT 10879 Query 252395 TGATTGGGAA-AGCA 252408 ||| ||||| |||| Sbjct 10878 GGATCGGGAACAGCA 10864 >seq27878 Length=10574 Score = 187 bits (206), Expect = 5e-42 Identities = 562/855 (66%), Gaps = 17/855 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||||||||| | |||||||| ||| ||||| | ||||| ||||||| ||||| || Sbjct 585 TCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATCCAGTCGAACGGGTTCTTG 644 Query 251623 GCATTGTACTGCTTGGG-ATGGCCAAGTGCTAC-GAAGATGCGGTCTGCCACAAACTCCA 251680 | ||||| ||||| | | |||| ||| | ||| ||||| ||||||||||| | Sbjct 645 ACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGA--CGGTCCGCCACAAACTCGA 702 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAG 251739 ||||| | ||| || ||||||||||| |||| | || || | | || || Sbjct 703 TGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCACC-GGCAGCGAGTCGCAC 761 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGAC 251799 | ||| || | ||| | | || || || |||||| | ||| | | || | Sbjct 762 ACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTGCACGCGGCTCTCAGGC 821 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAA-CTGTTGGTGCAGACCCTCGT 251857 ||||||||| ||||||| |||||||| || | ||| || | || ||||| ||||||| Sbjct 822 AGCTTGTTCACCAGCTTGGAGTACAGCAGGCACGCGAAGTCCGT--GTGCATGCCCTCGT 879 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || ||||||| |||||| || | | ||| || ||||||| ||| || ||| | |||| Sbjct 880 CACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATCAGCCCGCGCTTCTTCAGCC 939 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | ||| || || || ||||| | | ||||| ||| | | || | | Sbjct 940 AGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCGGCGAACGCCAGCA 999 Query 251978 GGCGCTCAG---CAAACGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCT 252034 ||||||| | | ||||| | | | | |||| | ||||| ||||||| Sbjct 1000 GGCGCTCCGGGTAAGACGACACGCGCGGGTCGCACCACTTGAGCGCCCACTGGGCCTTCT 1059 Query 252035 TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCT 252094 | || ||||| || ||||| || | || || | |||| |||||| Sbjct 1060 TCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGGTGGTCCTTCTCGATCGCGTCCT 1119 Query 252095 CGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCT 252154 |||| || || | || || ||||||| |||||| |||||| ||| || |||| Sbjct 1120 TGATGTACGTGTCGATGAGCAGCGAGTACACCTCCGAGTGGATGTTCTCGATGGCGATCT 1179 Query 252155 GGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214 || | | ||||| || || || | || || | ||||| | || | Sbjct 1180 GGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGCACCTCGTTACTGAAGTTCATGGCCA 1239 Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGT 252274 |||||| |||| ||||| |||||| | || ||||| | || | ||||||||||||| Sbjct 1240 GGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAGAACGCCAGCACCGTCTTGATGAAGT 1299 Query 252275 GACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTT 252334 ||||||| | ||| | ||| | |||||| | ||| || |||| | | Sbjct 1300 GACGCTCGTTGTCCGACAAATTGGC---CCAGTCCTTGAGGTCGTGCACCAGATCCAGCT 1356 Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGGTACT 252394 | || |||||||||| | | | |||||||||||||||| |||| || | | || Sbjct 1357 CCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTACATCTTCCACACGTCGTGCTCCT 1416 Query 252395 TGATTGGGAA-AGCA 252408 ||| ||||| |||| Sbjct 1417 GGATCGGGAACAGCA 1431 >seq27877 Length=1900 Score = 187 bits (206), Expect = 5e-42 Identities = 562/855 (66%), Gaps = 17/855 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||||||||| | |||||||| ||| ||||| | ||||| ||||||| ||||| || Sbjct 585 TCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATCCAGTCGAACGGGTTCTTG 644 Query 251623 GCATTGTACTGCTTGGG-ATGGCCAAGTGCTAC-GAAGATGCGGTCTGCCACAAACTCCA 251680 | ||||| ||||| | | |||| ||| | ||| ||||| ||||||||||| | Sbjct 645 ACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGA--CGGTCCGCCACAAACTCGA 702 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAG 251739 ||||| | ||| || ||||||||||| |||| | || || | | || || Sbjct 703 TGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCACC-GGCAGCGAGTCGCAC 761 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGAC 251799 | ||| || | ||| | | || || || |||||| | ||| | | || | Sbjct 762 ACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTGCACGCGGCTCTCAGGC 821 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAA-CTGTTGGTGCAGACCCTCGT 251857 ||||||||| ||||||| |||||||| || | ||| || | || ||||| ||||||| Sbjct 822 AGCTTGTTCACCAGCTTGGAGTACAGCAGGCACGCGAAGTCCGT--GTGCATGCCCTCGT 879 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || ||||||| |||||| || | | ||| || ||||||| ||| || ||| | |||| Sbjct 880 CACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATCAGCCCGCGCTTCTTCAGCC 939 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | ||| || || || ||||| | | ||||| ||| | | || | | Sbjct 940 AGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCGGCGAACGCCAGCA 999 Query 251978 GGCGCTCAG---CAAACGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCT 252034 ||||||| | | ||||| | | | | |||| | ||||| ||||||| Sbjct 1000 GGCGCTCCGGGTAAGACGACACGCGCGGGTCGCACCACTTGAGCGCCCACTGGGCCTTCT 1059 Query 252035 TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCT 252094 | || ||||| || ||||| || | || || | |||| |||||| Sbjct 1060 TCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGGTGGTCCTTCTCGATCGCGTCCT 1119 Query 252095 CGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCT 252154 |||| || || | || || ||||||| |||||| |||||| ||| || |||| Sbjct 1120 TGATGTACGTGTCGATGAGCAGCGAGTACACCTCCGAGTGGATGTTCTCGATGGCGATCT 1179 Query 252155 GGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214 || | | ||||| || || || | || || | ||||| | || | Sbjct 1180 GGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGCACCTCGTTACTGAAGTTCATGGCCA 1239 Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGT 252274 |||||| |||| ||||| |||||| | || ||||| | || | ||||||||||||| Sbjct 1240 GGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAGAACGCCAGCACCGTCTTGATGAAGT 1299 Query 252275 GACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTT 252334 ||||||| | ||| | ||| | |||||| | ||| || |||| | | Sbjct 1300 GACGCTCGTTGTCCGACAAATTGGC---CCAGTCCTTGAGGTCGTGCACCAGATCCAGCT 1356 Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGGTACT 252394 | || |||||||||| | | | |||||||||||||||| |||| || | | || Sbjct 1357 CCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTACATCTTCCACACGTCGTGCTCCT 1416 Query 252395 TGATTGGGAA-AGCA 252408 ||| ||||| |||| Sbjct 1417 GGATCGGGAACAGCA 1431 >seq26115 Length=10575 Score = 187 bits (206), Expect = 5e-42 Identities = 562/855 (66%), Gaps = 17/855 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||||||||| | |||||||| ||| ||||| | ||||| ||||||| ||||| || Sbjct 9991 TCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATCCAGTCGAACGGGTTCTTG 9932 Query 251623 GCATTGTACTGCTTGGG-ATGGCCAAGTGCTAC-GAAGATGCGGTCTGCCACAAACTCCA 251680 | ||||| ||||| | | |||| ||| | ||| ||||| ||||||||||| | Sbjct 9931 ACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGA--CGGTCCGCCACAAACTCGA 9874 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAG 251739 ||||| | ||| || ||||||||||| |||| | || || | | || || Sbjct 9873 TGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCACC-GGCAGCGAGTCGCAC 9815 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGAC 251799 | ||| || | ||| | | || || || |||||| | ||| | | || | Sbjct 9814 ACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTGCACGCGGCTCTCAGGC 9755 Query 251800 AGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAA-CTGTTGGTGCAGACCCTCGT 251857 ||||||||| ||||||| |||||||| || | ||| || | || ||||| ||||||| Sbjct 9754 AGCTTGTTCACCAGCTTGGAGTACAGCAGGCACGCGAAGTCCGT--GTGCATGCCCTCGT 9697 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || ||||||| |||||| || | | ||| || ||||||| ||| || ||| | |||| Sbjct 9696 CACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATCAGCCCGCGCTTCTTCAGCC 9637 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | ||| || || || ||||| | | ||||| ||| | | || | | Sbjct 9636 AGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCGGCGAACGCCAGCA 9577 Query 251978 GGCGCTCAG---CAAACGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCT 252034 ||||||| | | ||||| | | | | |||| | ||||| ||||||| Sbjct 9576 GGCGCTCCGGGTAAGACGACACGCGCGGGTCGCACCACTTGAGCGCCCACTGGGCCTTCT 9517 Query 252035 TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCT 252094 | || ||||| || ||||| || | || || | |||| |||||| Sbjct 9516 TCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGGTGGTCCTTCTCGATCGCGTCCT 9457 Query 252095 CGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCT 252154 |||| || || | || || ||||||| |||||| |||||| ||| || |||| Sbjct 9456 TGATGTACGTGTCGATGAGCAGCGAGTACACCTCCGAGTGGATGTTCTCGATGGCGATCT 9397 Query 252155 GGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214 || | | ||||| || || || | || || | ||||| | || | Sbjct 9396 GGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGCACCTCGTTACTGAAGTTCATGGCCA 9337 Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGT 252274 |||||| |||| ||||| |||||| | || ||||| | || | ||||||||||||| Sbjct 9336 GGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAGAACGCCAGCACCGTCTTGATGAAGT 9277 Query 252275 GACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTT 252334 ||||||| | ||| | ||| | |||||| | ||| || |||| | | Sbjct 9276 GACGCTCGTTGTCCGACAAATTGGC---CCAGTCCTTGAGGTCGTGCACCAGATCCAGCT 9220 Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGGTACT 252394 | || |||||||||| | | | |||||||||||||||| |||| || | | || Sbjct 9219 CCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTACATCTTCCACACGTCGTGCTCCT 9160 Query 252395 TGATTGGGAA-AGCA 252408 ||| ||||| |||| Sbjct 9159 GGATCGGGAACAGCA 9145 >seq22780 Length=3860 Score = 118 bits (130), Expect = 2e-21 Identities = 245/362 (68%), Gaps = 7/362 (2%) Strand=Plus/Plus Query 218650 GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGT 218709 ||| | ||||| || ||| || | || || || || || ||| | ||||||||||| Sbjct 1723 GAACTCAAGGTGGCACAGCTTGCAGGCTACGTGTCTGAGCATTCGGCTTACCATCACGGC 1782 Query 218710 GAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAAC 218769 ||| |||| ||||||| || || ||||| ||||||| || || || |||||| Sbjct 1783 GAGGCGAGTTTGCAGGGCTGTATCGTGAATATGGCGCAGGACTTCGTCGGAAGCAACAAC 1842 Query 218770 ATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGT 218829 || || ||||| ||| | ||||||||| ||| | || || ||||||| |||||| Sbjct 1843 ATCCACCTGCTGTCCCCGATCGGTCAGTTCGGTACGCGCCTGATGGGTGGTAAGGATGCG 1902 Query 218830 GCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAAT--- 218886 || || | || || || || || || || | ||||| | | | | || Sbjct 1903 GCCAGCGCTCGTTACATTTTCACCAACCTGGAGCAGCTCACGCGTCGACTCTACGATCCG 1962 Query 218887 CAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAG 218946 | || | | || |||||| |||||||| || || ||||| ||||||||||||||| Sbjct 1963 CTGGACAACGACGTGCTC---AAGTATCTGGACGAAGATGGCCAGTCGATTGAGCCCGAG 2019 Query 218947 TGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGG 219006 ||||| | || ||| || | ||||||| ||||| | |||||||| || ||| Sbjct 2020 TGGTACATCCCGATTATCCCCATGGTGCTCGTGAATGGCAGTGACGGTATCGGAAC-GGG 2078 Query 219007 TT 219008 || Sbjct 2079 TT 2080 >seq17832 Length=15358 Score = 118 bits (130), Expect = 2e-21 Identities = 245/362 (68%), Gaps = 7/362 (2%) Strand=Plus/Minus Query 218650 GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGT 218709 ||| | ||||| || ||| || | || || || || || ||| | ||||||||||| Sbjct 13760 GAACTCAAGGTGGCACAGCTTGCAGGCTACGTGTCTGAGCATTCGGCTTACCATCACGGC 13701 Query 218710 GAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAAC 218769 ||| |||| ||||||| || || ||||| ||||||| || || || |||||| Sbjct 13700 GAGGCGAGTTTGCAGGGCTGTATCGTGAATATGGCGCAGGACTTCGTCGGAAGCAACAAC 13641 Query 218770 ATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGT 218829 || || ||||| ||| | ||||||||| ||| | || || ||||||| |||||| Sbjct 13640 ATCCACCTGCTGTCCCCGATCGGTCAGTTCGGTACGCGCCTGATGGGTGGTAAGGATGCG 13581 Query 218830 GCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAAT--- 218886 || || | || || || || || || || | ||||| | | | | || Sbjct 13580 GCCAGCGCTCGTTACATTTTCACCAACCTGGAGCAGCTCACGCGTCGACTCTACGATCCG 13521 Query 218887 CAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAG 218946 | || | | || |||||| |||||||| || || ||||| ||||||||||||||| Sbjct 13520 CTGGACAACGACGTGCTC---AAGTATCTGGACGAAGATGGCCAGTCGATTGAGCCCGAG 13464 Query 218947 TGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGG 219006 ||||| | || ||| || | ||||||| ||||| | |||||||| || ||| Sbjct 13463 TGGTACATCCCGATTATCCCCATGGTGCTCGTGAATGGCAGTGACGGTATCGGAAC-GGG 13405 Query 219007 TT 219008 || Sbjct 13404 TT 13403 >seq23663 Length=12105 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||| Sbjct 105 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 164 Query 142563 CCCCAC 142568 |||||| Sbjct 165 CCCCAC 170 >seq18512 Length=515 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||| Sbjct 491 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 432 Query 142563 CCCCAC 142568 |||||| Sbjct 431 CCCCAC 426 >seq8249 Length=822 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||| Sbjct 770 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 711 Query 142563 CCCCAC 142568 |||||| Sbjct 710 CCCCAC 705 Score = 95.1 bits (104), Expect = 2e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||| || |||||||||| ||||||||||||| ||||||||||||||||| Sbjct 217 AGCCCGTCTAGCTCMGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 158 Query 142563 CCCCAC 142568 |||||| Sbjct 157 CCCCAC 152 >seq4095 Length=204 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||| Sbjct 79 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 20 Query 142563 CCCCAC 142568 |||||| Sbjct 19 CCCCAC 14 >seq33704 Length=6393 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||||| Sbjct 2183 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGTCTCTTAATCTTGTGGTCGTGGGTTCGAG 2242 Query 142563 CCCCAC 142568 |||||| Sbjct 2243 CCCCAC 2248 >seq16124 Length=2717 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| ||||||||||| | ||||||||||||||||| Sbjct 831 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATTTTGTGGTCGTGGGTTCGAG 890 Query 142563 CCCCACATCGGGCA 142576 |||||| ||||| Sbjct 891 CCCCACGGTGGGCA 904 >seq31089 Length=16610 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| ||||||||||||| | ||||||||||||||| Sbjct 14849 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGGGGTCGTGGGTTCGAG 14908 Query 142563 CCCCA 142567 ||||| Sbjct 14909 CCCCA 14913 >seq4570 Length=201 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 199 TAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 142 >seq1946 Length=229 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 224 TAGCTCAGTTGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027350489296448