Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq36271 419 4e-112 seq32329 374 2e-98 seq27878 374 2e-98 seq27877 374 2e-98 seq26115 374 2e-98 >seq36271 Length=16985 Score = 419 bits (464), Expect = 4e-112 Identities = 1273/1933 (66%), Gaps = 93/1933 (5%) Strand=Plus/Plus Query 243735 CCACGCTGAACTGGACGGGTGCGACGGCGGCCTTG-GTCCTC--AGGTAGTACATGCCGG 243791 ||||| ||||||||| || || |||| | | |||| | | |||||||||||| | Sbjct 1099 CCACGGTGAACTGGATGG---CGTCGGCTTTCGGGCGTCCGCGCATGTAGTACATGCCCG 1155 Query 243792 TCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCT 243851 ||||||| || | |||||||| || |||||||| || ||||| | || | Sbjct 1156 TCTTGAGCCCCTTTTTCCAGGCGTAGAAGTGCATGGATGTGAGCTTGCTGATGGTC---- 1211 Query 243852 TTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC- 243910 |||||| | | || |||||| |||||||||||| | | ||| |||| Sbjct 1212 --GGGTCGGCGATGTG------GATGTTGAGCGACTGGCTCTGGCAAATGTAGG-CGCCG 1262 Query 243911 CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATG 243970 || || || | | | | | |||||| ||||| || |||||||||| || Sbjct 1263 CGGTCGGCCGAGAGGTCCAACACCGTCTTCTGCTTGATCTCCCACACCGTCTTGTACTTG 1322 Query 243971 GGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGC 244030 ||||| | || || | | || |||||||||||||| | | | || | Sbjct 1323 TCCTTGATTTTGTCCGGAATGATCTTGACCTTCTGCACCGAGCCGCCATCGTTCAGGATC 1382 Query 244031 TGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTC---CAGCGCCTCGACCAGGTGC 244087 ||| |||||| | | |||| | ||||| |||| |||| || | ||||| | Sbjct 1383 TGGTTGCGCACCTCCGGGGTCCAGATGCCCA---GCTCAATCAGCTCCCTCATCAGGTAC 1439 Query 244088 CTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGC 244147 ||||||| | ||||| |||| ||||||||||| | ||| | |||| || | Sbjct 1440 TTGTTCACAATGGTGAACTCGCCCGCAAGCACGCGGCGGTTGTACATGTTGGACGTGTAC 1499 Query 244148 GGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGAC 244207 ||||||||| ||| |||| ||||| || || ||||| || |||||||| |||| Sbjct 1500 GGCTCGATGGACTCGTTGTTACCCAGGATTTGAGCCGTCGAGGCCGTCGGCATCGGCGCG 1559 Query 244208 ACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCC 244267 || ||||| ||| | | ||||||| | | | | ||||| | ||||||| Sbjct 1560 ACGAGCAGCGAGTTGCGGATGCCGTGCTTAATCACGTTCTGCTTGAGCGTGGCCCAGTCC 1619 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 |||| ||||| || | ||| |||||||||||| ||||| | | |||||| Sbjct 1620 CACAGCCCCGAA------TCAGGGGTGACGCCCCACATGTCGAACTGGAAGATGCCCTTG 1673 Query 244328 CTGACGGGGCTGCCCTCGTAGGTCGGGTA-GGGACCGTCGCGCTGGGCCAGCTTACAGCT 244386 ||| | || ||||| | | ||| ||| ||| || | | || ||| | || || | Sbjct 1674 CTGGCAGGAGAGCCCTGGAACGTCTCGTACGGGCCCAGCTC-CTTGGCGATCTC-CATCG 1731 Query 244387 -CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445 | || | || |||||||| |||||||| |||||| ||||||| | |||||||| | Sbjct 1732 ACGTCTCCATGGAAGCGTAGTAAATGGTCTCAAAGATCTTCTTGTTGAGCTCGCGGGC-T 1790 Query 244446 TGCCGCAGGT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504 ||| | | ||| | | | |||| | ||||| ||||||| || ||||| |||||| Sbjct 1791 TGCGGGCTCTCGAACGCGTAGTCCATGAGGATGAACGCGTCGGCGAGACCCTGAACGCCG 1850 Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAG 244561 || |||| ||| | ||| ||| ||||||| |||| || || | ||||||||| || Sbjct 1851 ATACCGACGGGGCGGTGGCGCATGTTGGACGTGCGC---GCCTCCGCCACGGGGTAGTAG 1907 Query 244562 TTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACG--ACGTCGGCCAGCA 244619 ||| |||| || |||||||| ||||||||||| | || | || || ||| |||| Sbjct 1908 TTGACGTCAATGACCTTGTTCAGGTTGCGGGTCACCA--CCTTCGTCACCTCGTACAGCT 1965 Query 244620 GCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGG 244679 || ||| | || || | || || ||| |||| | || | Sbjct 1966 TGTGGTAGTTGAACACGCCGCCCTCTTC---------------CACGAACTTGGGCAGCG 2010 Query 244680 CGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGG 244739 | ||| ||||||||||| ||||||||||| || | | ||||| | | ||| Sbjct 2011 CCACGGACGCCAGGTTGCACACGGCCACCTCGTCAGGCGACGAGTACTCCATGACCTCAC 2070 Query 244740 TGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGG 244799 ||| | ||| || | ||| |||||||||| ||| || || |||||| |||| | Sbjct 2071 AGCACAAGTTGCTCGAGCGGATCGTGCCCAGGTTCTGCTGGTTCGACTTGCGGTTGGCCG 2130 Query 244800 CGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCC 244859 ||||||| | |||||||| ||| | || ||||| | ||||||| | |||| | | || Sbjct 2131 AGTCCTTGAACAGCATGAACGGCACGCCCGTCTCAATCTGGGCGTCCAGGATGGAGAACC 2190 Query 244860 AGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACA 244919 | || | | || |||| |||| ||||||| ||||| |||||| ||||| Sbjct 2191 ACAGCTGCTGCGCTTTGATCGTCTTGCGAGCGCGTCCCTCCTTCTCGTACTTTTCGTACA 2250 Query 244920 GGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG-CCGGGCACATG 244978 |||||||||||||| ||||||| ||||| | ||| |||| | || ||||| | | Sbjct 2251 GGGCCTCGAACTCGTCGCCCCAGCACTCGTAGA-GCCCGGGCGCCTCGTTGGGGCAGAAG 2309 Query 244979 AGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCC 245038 || ||||||| |||| | | | ||| | || ||||||||| || || | |||||| || Sbjct 2310 AGGCTCCACTGGCCGTCTGCTTCGACGCGCTTCATGAAGAGATCCGGCACCCAGAGCGCG 2369 Query 245039 TGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAG 245098 | ||| ||||| | | | ||| || ||| |||||||| ||| |||| || Sbjct 2370 TAGAACAGGTCGCGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCCGCAGGTCCAGGAAC 2429 Query 245099 TCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTG 245158 || || |||||| ||||||||||||||| ||||| |||| | || |||||| | Sbjct 2430 TCGAACACGTCGGCGTGCCAGGGCTCCAGGTAGATGGCGAACGATCCCTTGCGCTTGCCG 2489 Query 245159 CCTCCCTGGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217 || ||||||||||| ||| | || | |||| || | ||||| | || | ||||| Sbjct 2490 CCGCCCTGGTCCACGTATCGTGCCGTG-TCGTTAAACACACGCAGCATGGGGATGATGCC 2548 Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA 245277 ||| ||| ||| || ||||| |||||| | | | | | || ||| || Sbjct 2549 GTTGGAGGAGCCATTCGTGCCGCGAATGTAGCTGTTCGTCGCACGGATATTGTGCATACT 2608 Query 245278 CATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 ||||| | ||||| || ||||||||| || || ||| | ||||| || Sbjct 2609 GATGCCAATCCCGCCCGCCCACTTGGAGATACACGCACACTGCTTCAGTGTGTCGTAAAT 2668 Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGG 245397 |||||| || ||| || |||| || || |||||||| || ||||| || || Sbjct 2669 GCCCTCAATCGAGTCGTCCTGCATGGCCAGGAGGAAGCAGGACGAGAGCTGAGGACGCGG 2728 Query 245398 GCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACC 245456 ||| | ||||||||| ||||| | ||||| || || | | || ||| | || | Sbjct 2729 CGTGCCGGCGTTGAACAGCGTGGGCGTCGCGTGCGTGAA-AAACATCTGCGACATGAGCT 2787 Query 245457 CGTACGTCTGGAGCAGAGCG---TCGATGT-TGTCGCCGTGGATCTGCAGGGCGCAC-CT 245511 ||||||||| |||||||| || | || ||| |||||| ||| || ||| | Sbjct 2788 CGTACGTCT---GCAGAGCGGCCTCAACGTCCGTC-TTGTGGATGCCCAGCGC-CACGCG 2842 Query 245512 CATGAGGGTGTGCTG-GGGCGTCTCGATGGGTCCCTCGGGTCCCTTGA-GC-----ATGT 245564 ||||| | ||||| ||||| ||| | | || || || |||| || | || Sbjct 2843 CATGATCATCTGCTGCGGGCG-CTCCA--CGACCTTC----CCGTTGACGCGGAAGAGGT 2895 Query 245565 AGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGA 245624 || ||||||||||||||||| || ||||| ||| | ||||| || ||| ||| Sbjct 2896 AGCCTCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCGAAGTCCCGGTCGTGGATGA 2955 Query 245625 CGGCTGCGTCGAG 245637 ||| | || ||| Sbjct 2956 TGGCCGAGTTGAG 2968 >seq32329 Length=12294 Score = 374 bits (414), Expect = 2e-98 Identities = 606/865 (70%), Gaps = 15/865 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || || |||||| || Sbjct 10874 GATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGC 10933 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | || |||| | ||| | ||||| |||| || ||||| Sbjct 10934 CGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAACGAGCG 10993 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| | | ||||| |||||||| ||| |||||||| || || ||||| Sbjct 10994 TCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAA 11053 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| || ||||||||| ||||| |||||||||||||| || Sbjct 11054 CCTGGCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTT 11113 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 |||||| ||||| |||||| | ||||| ||||||||| | ||||||| ||||||| Sbjct 11114 CCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCG---CTGCTCATCGACACGTA 11170 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| ||| | ||||| || ||| | ||||| |||||||| || ||| | Sbjct 11171 CATCAAGGACGCGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGT 11230 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | ||||||||| | ||||||||||| ||| ||| | || | | | | || Sbjct 11231 GACGAAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCGTGTCGTCTTACCCGGA 11290 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | ||| | || || |||| || ||||||||||||||||||||| | ||| ||| || Sbjct 11291 GCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGAT 11350 Query 42761 CTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820 ||||||||| ||| || | | ||||||||| || | |||||||||||| |||||||| Sbjct 11351 CTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAG 11410 Query 42821 CAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA 42880 | | |||||||| |||| | |||||| || ||||| |||| ||| | | || | | Sbjct 11411 CCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTC---CAAGCTGGTGAA 11467 Query 42881 CAAGC--CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 ||||| ||| || ||| | | | || | || || |||| ||||||| | Sbjct 11468 CAAGCTGCCTGAGAGCCGCGTGCACCAG--ATTGTGCGTGACGCGGTGGTGATCGAGCAC 11525 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTG 42997 |||||| | | |||||||| ||| ||| |||||||||| | |||| |||||||| Sbjct 11526 GAGTTCGTGTGCGACTCGCTGCCGGTGGAGCTGATCGGCATGAA-CTCGACGCTCATGTG 11584 Query 42998 CAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTA 43057 | |||||||| ||| || || |||| ||| |||| | | |||| | | |||| Sbjct 11585 CCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTA 11644 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | ||| ||||||| ||||| | |||||| || ||||||||||||| || Sbjct 11645 CAACGTCAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTT 11704 Query 43118 TTTCGAGAAGCGCGTCGCCGACTAC 43142 |||||||||||||| | ||| ||| Sbjct 11705 CTTCGAGAAGCGCGTGGGCGAGTAC 11729 >seq27878 Length=10574 Score = 374 bits (414), Expect = 2e-98 Identities = 606/865 (70%), Gaps = 15/865 (2%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || || |||||| || Sbjct 1421 GATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGC 1362 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | || |||| | ||| | ||||| |||| || ||||| Sbjct 1361 CGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAACGAGCG 1302 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| | | ||||| |||||||| ||| |||||||| || || ||||| Sbjct 1301 TCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAA 1242 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| || ||||||||| ||||| |||||||||||||| || Sbjct 1241 CCTGGCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTT 1182 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 |||||| ||||| |||||| | ||||| ||||||||| | ||||||| ||||||| Sbjct 1181 CCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCG---CTGCTCATCGACACGTA 1125 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| ||| | ||||| || ||| | ||||| |||||||| || ||| | Sbjct 1124 CATCAAGGACGCGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGT 1065 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | ||||||||| | ||||||||||| ||| ||| | || | | | | || Sbjct 1064 GACGAAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCGTGTCGTCTTACCCGGA 1005 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | ||| | || || |||| || ||||||||||||||||||||| | ||| ||| || Sbjct 1004 GCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGAT 945 Query 42761 CTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820 ||||||||| ||| || | | ||||||||| || | |||||||||||| |||||||| Sbjct 944 CTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAG 885 Query 42821 CAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA 42880 | | |||||||| |||| | |||||| || ||||| |||| ||| | | || | | Sbjct 884 CCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTC---CAAGCTGGTGAA 828 Query 42881 CAAGC--CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 ||||| ||| || ||| | | | || | || || |||| ||||||| | Sbjct 827 CAAGCTGCCTGAGAGCCGCGTGCACCAG--ATTGTGCGTGACGCGGTGGTGATCGAGCAC 770 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTG 42997 |||||| | | |||||||| ||| ||| |||||||||| | |||| |||||||| Sbjct 769 GAGTTCGTGTGCGACTCGCTGCCGGTGGAGCTGATCGGCATGAA-CTCGACGCTCATGTG 711 Query 42998 CAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTA 43057 | |||||||| ||| || || |||| ||| |||| | | |||| | | |||| Sbjct 710 CCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTA 651 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | ||| ||||||| ||||| | |||||| || ||||||||||||| || Sbjct 650 CAACGTCAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTT 591 Query 43118 TTTCGAGAAGCGCGTCGCCGACTAC 43142 |||||||||||||| | ||| ||| Sbjct 590 CTTCGAGAAGCGCGTGGGCGAGTAC 566 >seq27877 Length=1900 Score = 374 bits (414), Expect = 2e-98 Identities = 606/865 (70%), Gaps = 15/865 (2%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || || |||||| || Sbjct 1421 GATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGC 1362 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | || |||| | ||| | ||||| |||| || ||||| Sbjct 1361 CGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAACGAGCG 1302 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| | | ||||| |||||||| ||| |||||||| || || ||||| Sbjct 1301 TCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAA 1242 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| || ||||||||| ||||| |||||||||||||| || Sbjct 1241 CCTGGCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTT 1182 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 |||||| ||||| |||||| | ||||| ||||||||| | ||||||| ||||||| Sbjct 1181 CCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCG---CTGCTCATCGACACGTA 1125 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| ||| | ||||| || ||| | ||||| |||||||| || ||| | Sbjct 1124 CATCAAGGACGCGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGT 1065 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | ||||||||| | ||||||||||| ||| ||| | || | | | | || Sbjct 1064 GACGAAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCGTGTCGTCTTACCCGGA 1005 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | ||| | || || |||| || ||||||||||||||||||||| | ||| ||| || Sbjct 1004 GCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGAT 945 Query 42761 CTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820 ||||||||| ||| || | | ||||||||| || | |||||||||||| |||||||| Sbjct 944 CTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAG 885 Query 42821 CAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA 42880 | | |||||||| |||| | |||||| || ||||| |||| ||| | | || | | Sbjct 884 CCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTC---CAAGCTGGTGAA 828 Query 42881 CAAGC--CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 ||||| ||| || ||| | | | || | || || |||| ||||||| | Sbjct 827 CAAGCTGCCTGAGAGCCGCGTGCACCAG--ATTGTGCGTGACGCGGTGGTGATCGAGCAC 770 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTG 42997 |||||| | | |||||||| ||| ||| |||||||||| | |||| |||||||| Sbjct 769 GAGTTCGTGTGCGACTCGCTGCCGGTGGAGCTGATCGGCATGAA-CTCGACGCTCATGTG 711 Query 42998 CAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTA 43057 | |||||||| ||| || || |||| ||| |||| | | |||| | | |||| Sbjct 710 CCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTA 651 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | ||| ||||||| ||||| | |||||| || ||||||||||||| || Sbjct 650 CAACGTCAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTT 591 Query 43118 TTTCGAGAAGCGCGTCGCCGACTAC 43142 |||||||||||||| | ||| ||| Sbjct 590 CTTCGAGAAGCGCGTGGGCGAGTAC 566 >seq26115 Length=10575 Score = 374 bits (414), Expect = 2e-98 Identities = 606/865 (70%), Gaps = 15/865 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || || |||||| || Sbjct 9155 GATCCAGGAGCACGACGTGTGGAAGATGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGC 9214 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | || |||| | ||| | ||||| |||| || ||||| Sbjct 9215 CGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGCCAATTTGTCGGACAACGAGCG 9274 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| | | ||||| |||||||| ||| |||||||| || || ||||| Sbjct 9275 TCACTTCATCAAGACGGTGCTGGCGTTCTTCGCGGCCAGCGACGGCATTGTGAACGAGAA 9334 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| || ||||||||| ||||| |||||||||||||| || Sbjct 9335 CCTGGCCATGAACTTCAGTAACGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTT 9394 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 |||||| ||||| |||||| | ||||| ||||||||| | ||||||| ||||||| Sbjct 9395 CCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTCG---CTGCTCATCGACACGTA 9451 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| ||| | ||||| || ||| | ||||| |||||||| || ||| | Sbjct 9452 CATCAAGGACGCGATCGAGAAGGACCACCTGCTGCGCGCCATCGAGACGATCCCGTGCGT 9511 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | ||||||||| | ||||||||||| ||| ||| | || | | | | || Sbjct 9512 GACGAAGAAGGCCCAGTGGGCGCTCAAGTGGTGCGACCCGCGCGTGTCGTCTTACCCGGA 9571 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | ||| | || || |||| || ||||||||||||||||||||| | ||| ||| || Sbjct 9572 GCGCCTGCTGGCGTTCGCCGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGAT 9631 Query 42761 CTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAG 42820 ||||||||| ||| || | | ||||||||| || | |||||||||||| |||||||| Sbjct 9632 CTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAG 9691 Query 42821 CAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCA 42880 | | |||||||| |||| | |||||| || ||||| |||| ||| | | || | | Sbjct 9692 CCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTGCTGTACTC---CAAGCTGGTGAA 9748 Query 42881 CAAGC--CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 ||||| ||| || ||| | | | || | || || |||| ||||||| | Sbjct 9749 CAAGCTGCCTGAGAGCCGCGTGCACCAG--ATTGTGCGTGACGCGGTGGTGATCGAGCAC 9806 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTG 42997 |||||| | | |||||||| ||| ||| |||||||||| | |||| |||||||| Sbjct 9807 GAGTTCGTGTGCGACTCGCTGCCGGTGGAGCTGATCGGCATGAA-CTCGACGCTCATGTG 9865 Query 42998 CAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTA 43057 | |||||||| ||| || || |||| ||| |||| | | |||| | | |||| Sbjct 9866 CCAGTACATCGAGTTTGTGGCGGACCGTCTGCTGTACTCGTTGGGCGTGTCCAAGATCTA 9925 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | ||| ||||||| ||||| | |||||| || ||||||||||||| || Sbjct 9926 CAACGTCAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAATTT 9985 Query 43118 TTTCGAGAAGCGCGTCGCCGACTAC 43142 |||||||||||||| | ||| ||| Sbjct 9986 CTTCGAGAAGCGCGTGGGCGAGTAC 10010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943903293025280