Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq32329 304 1e-77 seq27878 304 1e-77 seq27877 304 1e-77 seq26115 304 1e-77 seq30472 143 3e-29 seq32285 140 3e-28 seq35386 113 5e-20 seq12976 113 5e-20 >seq32329 Length=12294 Score = 304 bits (336), Expect = 1e-77 Identities = 627/914 (69%), Gaps = 28/914 (3%) Strand=Plus/Minus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || |||||||| ||||| || ||||| || || |||| || || || | ||| Sbjct 11728 TACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATC 11669 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGT---GCCGATCAGGTCGACGAGCAGC 132726 | || || ||||| ||||||| ||||| ||| | | || || ||||| Sbjct 11668 CAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGT--AC-AGCAGA 11612 Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACG 132785 | ||| ||||| ||||||||||| || ||||| | ||| | || | || | ||| Sbjct 11611 CGGTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCG-AGTTCATGCCGATCAGCTC 11553 Query 132786 CACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844 ||||||||||| ||| | ||| ||| ||||||| | |||||||| || || Sbjct 11552 CACCGGCAGCGAGTCGCACACGAACTCGT-GCTCGATCACCACCGCGTCACGCACAAT-- 11496 Query 132845 CCCTAACGCGCGCCGCGCTC-GGCCG-TTG--CACCAAATGCTTGAA---CATCAAGCAA 132897 || || ||| || ||| ||| | ||| ||||| ||||| | || || ||| Sbjct 11495 --CTGGTGCACGCGGCTCTCAGGCAGCTTGTTCACCA---GCTTGGAGTACAGCAGGCAC 11441 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || ||||| |||| ||||||||| | | ||||| ||||| ||| ||| ||| Sbjct 11440 GCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCG 11381 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| || ||||| || || ||||| || || | | ||| |||||| ||||||| | Sbjct 11380 GGCATCAGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATG 11321 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG-CGAT 133076 ||||| || || ||||| |||| ||||||||| | | | | | || || || Sbjct 11320 CCCTCCACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGC-GCGGGTCGCA 11262 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| |||||||| | |||||| | | |||||||| ||||| ||||||||| || Sbjct 11261 CCACTTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAG 11202 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || || ||||| || | | ||| ||||||||||| ||| |||| || Sbjct 11201 CAGGTGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGCGAGTACACCTC 11142 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 |||||| | |||||| |||||||| || || ||||| ||||| || |||||| |||||| Sbjct 11141 CGAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTG 11082 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 ||| || | | ||| | | |||| || ||||| || |||||||||||||| ||||| Sbjct 11081 CACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAA 11022 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCG 133376 || |||||||| ||||||||| || ||||||||||| ||| ||||||| | Sbjct 11021 GAACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTC-CT 10963 Query 133377 CGTGTCCTTGGA-CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | | | || | ||| |||| ||||||| | ||||| ||||| ||||| || || |||| Sbjct 10962 TGAGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGT 10903 Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGC 133495 |||| |||||| ||| | || || || || | ||| |||||| ||||| || Sbjct 10902 ACATCTTCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCCA 10843 Query 133496 GCAACAGCGGCTCC 133509 || | ||||||| Sbjct 10842 CCAGGAACGGCTCC 10829 >seq27878 Length=10574 Score = 304 bits (336), Expect = 1e-77 Identities = 627/914 (69%), Gaps = 28/914 (3%) Strand=Plus/Plus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || |||||||| ||||| || ||||| || || |||| || || || | ||| Sbjct 567 TACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATC 626 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGT---GCCGATCAGGTCGACGAGCAGC 132726 | || || ||||| ||||||| ||||| ||| | | || || ||||| Sbjct 627 CAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGT--AC-AGCAGA 683 Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACG 132785 | ||| ||||| ||||||||||| || ||||| | ||| | || | || | ||| Sbjct 684 CGGTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCG-AGTTCATGCCGATCAGCTC 742 Query 132786 CACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844 ||||||||||| ||| | ||| ||| ||||||| | |||||||| || || Sbjct 743 CACCGGCAGCGAGTCGCACACGAACTCGT-GCTCGATCACCACCGCGTCACGCACAAT-- 799 Query 132845 CCCTAACGCGCGCCGCGCTC-GGCCG-TTG--CACCAAATGCTTGAA---CATCAAGCAA 132897 || || ||| || ||| ||| | ||| ||||| ||||| | || || ||| Sbjct 800 --CTGGTGCACGCGGCTCTCAGGCAGCTTGTTCACCA---GCTTGGAGTACAGCAGGCAC 854 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || ||||| |||| ||||||||| | | ||||| ||||| ||| ||| ||| Sbjct 855 GCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCG 914 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| || ||||| || || ||||| || || | | ||| |||||| ||||||| | Sbjct 915 GGCATCAGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATG 974 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG-CGAT 133076 ||||| || || ||||| |||| ||||||||| | | | | | || || || Sbjct 975 CCCTCCACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGC-GCGGGTCGCA 1033 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| |||||||| | |||||| | | |||||||| ||||| ||||||||| || Sbjct 1034 CCACTTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAG 1093 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || || ||||| || | | ||| ||||||||||| ||| |||| || Sbjct 1094 CAGGTGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGCGAGTACACCTC 1153 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 |||||| | |||||| |||||||| || || ||||| ||||| || |||||| |||||| Sbjct 1154 CGAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTG 1213 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 ||| || | | ||| | | |||| || ||||| || |||||||||||||| ||||| Sbjct 1214 CACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAA 1273 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCG 133376 || |||||||| ||||||||| || ||||||||||| ||| ||||||| | Sbjct 1274 GAACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTC-CT 1332 Query 133377 CGTGTCCTTGGA-CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | | | || | ||| |||| ||||||| | ||||| ||||| ||||| || || |||| Sbjct 1333 TGAGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGT 1392 Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGC 133495 |||| |||||| ||| | || || || || | ||| |||||| ||||| || Sbjct 1393 ACATCTTCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCCA 1452 Query 133496 GCAACAGCGGCTCC 133509 || | ||||||| Sbjct 1453 CCAGGAACGGCTCC 1466 >seq27877 Length=1900 Score = 304 bits (336), Expect = 1e-77 Identities = 627/914 (69%), Gaps = 28/914 (3%) Strand=Plus/Plus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || |||||||| ||||| || ||||| || || |||| || || || | ||| Sbjct 567 TACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATC 626 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGT---GCCGATCAGGTCGACGAGCAGC 132726 | || || ||||| ||||||| ||||| ||| | | || || ||||| Sbjct 627 CAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGT--AC-AGCAGA 683 Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACG 132785 | ||| ||||| ||||||||||| || ||||| | ||| | || | || | ||| Sbjct 684 CGGTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCG-AGTTCATGCCGATCAGCTC 742 Query 132786 CACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844 ||||||||||| ||| | ||| ||| ||||||| | |||||||| || || Sbjct 743 CACCGGCAGCGAGTCGCACACGAACTCGT-GCTCGATCACCACCGCGTCACGCACAAT-- 799 Query 132845 CCCTAACGCGCGCCGCGCTC-GGCCG-TTG--CACCAAATGCTTGAA---CATCAAGCAA 132897 || || ||| || ||| ||| | ||| ||||| ||||| | || || ||| Sbjct 800 --CTGGTGCACGCGGCTCTCAGGCAGCTTGTTCACCA---GCTTGGAGTACAGCAGGCAC 854 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || ||||| |||| ||||||||| | | ||||| ||||| ||| ||| ||| Sbjct 855 GCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCG 914 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| || ||||| || || ||||| || || | | ||| |||||| ||||||| | Sbjct 915 GGCATCAGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATG 974 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG-CGAT 133076 ||||| || || ||||| |||| ||||||||| | | | | | || || || Sbjct 975 CCCTCCACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGC-GCGGGTCGCA 1033 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| |||||||| | |||||| | | |||||||| ||||| ||||||||| || Sbjct 1034 CCACTTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAG 1093 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || || ||||| || | | ||| ||||||||||| ||| |||| || Sbjct 1094 CAGGTGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGCGAGTACACCTC 1153 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 |||||| | |||||| |||||||| || || ||||| ||||| || |||||| |||||| Sbjct 1154 CGAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTG 1213 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 ||| || | | ||| | | |||| || ||||| || |||||||||||||| ||||| Sbjct 1214 CACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAA 1273 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCG 133376 || |||||||| ||||||||| || ||||||||||| ||| ||||||| | Sbjct 1274 GAACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTC-CT 1332 Query 133377 CGTGTCCTTGGA-CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | | | || | ||| |||| ||||||| | ||||| ||||| ||||| || || |||| Sbjct 1333 TGAGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGT 1392 Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGC 133495 |||| |||||| ||| | || || || || | ||| |||||| ||||| || Sbjct 1393 ACATCTTCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCCA 1452 Query 133496 GCAACAGCGGCTCC 133509 || | ||||||| Sbjct 1453 CCAGGAACGGCTCC 1466 >seq26115 Length=10575 Score = 304 bits (336), Expect = 1e-77 Identities = 627/914 (69%), Gaps = 28/914 (3%) Strand=Plus/Minus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || |||||||| ||||| || ||||| || || |||| || || || | ||| Sbjct 10009 TACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCATC 9950 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGT---GCCGATCAGGTCGACGAGCAGC 132726 | || || ||||| ||||||| ||||| ||| | | || || ||||| Sbjct 9949 CAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGT--AC-AGCAGA 9893 Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACG 132785 | ||| ||||| ||||||||||| || ||||| | ||| | || | || | ||| Sbjct 9892 CGGTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCG-AGTTCATGCCGATCAGCTC 9834 Query 132786 CACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844 ||||||||||| ||| | ||| ||| ||||||| | |||||||| || || Sbjct 9833 CACCGGCAGCGAGTCGCACACGAACTCGT-GCTCGATCACCACCGCGTCACGCACAAT-- 9777 Query 132845 CCCTAACGCGCGCCGCGCTC-GGCCG-TTG--CACCAAATGCTTGAA---CATCAAGCAA 132897 || || ||| || ||| ||| | ||| ||||| ||||| | || || ||| Sbjct 9776 --CTGGTGCACGCGGCTCTCAGGCAGCTTGTTCACCA---GCTTGGAGTACAGCAGGCAC 9722 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || ||||| |||| ||||||||| | | ||||| ||||| ||| ||| ||| Sbjct 9721 GCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCG 9662 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| || ||||| || || ||||| || || | | ||| |||||| ||||||| | Sbjct 9661 GGCATCAGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATG 9602 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG-CGAT 133076 ||||| || || ||||| |||| ||||||||| | | | | | || || || Sbjct 9601 CCCTCCACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGC-GCGGGTCGCA 9543 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| |||||||| | |||||| | | |||||||| ||||| ||||||||| || Sbjct 9542 CCACTTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAG 9483 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 || || ||||| || | | ||| ||||||||||| ||| |||| || Sbjct 9482 CAGGTGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGCGAGTACACCTC 9423 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 |||||| | |||||| |||||||| || || ||||| ||||| || |||||| |||||| Sbjct 9422 CGAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTG 9363 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 ||| || | | ||| | | |||| || ||||| || |||||||||||||| ||||| Sbjct 9362 CACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAA 9303 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCG 133376 || |||||||| ||||||||| || ||||||||||| ||| ||||||| | Sbjct 9302 GAACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTC-CT 9244 Query 133377 CGTGTCCTTGGA-CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGT 133435 | | | || | ||| |||| ||||||| | ||||| ||||| ||||| || || |||| Sbjct 9243 TGAGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGT 9184 Query 133436 ACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGC 133495 |||| |||||| ||| | || || || || | ||| |||||| ||||| || Sbjct 9183 ACATCTTCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCCA 9124 Query 133496 GCAACAGCGGCTCC 133509 || | ||||||| Sbjct 9123 CCAGGAACGGCTCC 9110 >seq30472 Length=20972 Score = 143 bits (158), Expect = 3e-29 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| || ||||| | ||||| ||| | | Sbjct 12221 ATGCAGATTTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTTGACGTGGAGCCTTCG 12162 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | ||||||| ||||| || ||||| |||||| |||| Sbjct 12161 GACTCGATCGACAACG-TCAAGCAGAAAATCCAAGACAAGGAAGGAAT-CCCGCCTGACC 12104 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| |||| || || || | |||||||| Sbjct 12103 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTAAGCGACTACA 12044 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | ||| |||| |||||||||||| || | || ||| Sbjct 12043 ACATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCGTCTGCGCGGTGGC 11994 Score = 143 bits (158), Expect = 3e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| || ||||| |||||||| || ||||| ||||||| ||| | Sbjct 12453 AAAGATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCC 12394 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358 | ||| | | | | || | ||||||| || || || || || |||||| | Sbjct 12393 TTCGGACTCGATCGATAATGTCAAGCAGAAAATCCAAGATAAGGAAGGCAT-CCCGCCTG 12335 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || |||| ||| ||||| |||||||| |||| || || || | ||||| Sbjct 12334 ACCAGCAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGCGACT 12275 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| ||||| | ||| |||| |||||||||||| || | || ||| Sbjct 12274 ACAACATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCGTCTGCGCGGTGGC 12222 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| || ||||| ||||||| ||| | | Sbjct 11993 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCTTCG 11934 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | | | || | ||||||| ||||| || || || || | ||||| Sbjct 11933 GACTCGATCGACAATGTCAAGCAGAAAATCCAAGACAAGGAAGGCATCCCACCTGACCAG 11874 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| |||| || || || | |||||||||| Sbjct 11873 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTAAGCGACTACAAC 11814 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | ||| |||| |||||||||||| | | ||||| Sbjct 11813 ATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCGTCTTCGTGGCGG 11767 >seq32285 Length=18199 Score = 140 bits (154), Expect = 3e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| || ||||| | || || ||| | | Sbjct 8576 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACGCTAGATGTGGAGCCGTCG 8517 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | ||||||| ||||| ||||| || |||||| |||| Sbjct 8516 GACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACC 8459 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| |||| |||||| || | |||||||| Sbjct 8458 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGAGCGACTACA 8399 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| | || ||||| ||||||||||| || | |||||| Sbjct 8398 ACATCCAGAAGGAGTCTACACTGCACCTGGTGCTGCGTCTGCGTGGCGGC 8349 Score = 118 bits (130), Expect = 1e-21 Identities = 114/144 (79%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAA 38386 ||||||| ||||| ||||| || |||||| ||||| ||||| || || | ||| ||||| Sbjct 7808 AAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAA 7750 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||||||| || | ||||| || | ||||||||||||||| ||||| | || ||||| Sbjct 7749 GCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACACTGCA 7690 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| || | ||||| Sbjct 7689 CCTGGTGCTGCGTCTGCGTGGCGG 7666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 || || | ||| ||||| |||||||| || | ||||| || | ||||||||||||||| Sbjct 7613 CTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTAAGCGACTACAACATCCAG 7554 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| | || |||||| ||||||||||| | | ||||| Sbjct 7553 AAGGAGTCTACACTGCATCTGGTGCTGCGTCTTCGCGGCGG 7513 >seq35386 Length=12911 Score = 113 bits (124), Expect = 5e-20 Identities = 141/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || ||||| || |||||||| |||| || ||| | | Sbjct 4558 ATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCCGTCG 4617 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||||| | | | | || | ||||||| ||||| || || || |||||| ||||| Sbjct 4618 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCAT-CCCGCCTGACCA 4676 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || |||| ||||| ||| |||||||| Sbjct 4677 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAA 4736 Query 38423 CATCCAAAAGG 38433 |||||| |||| Sbjct 4737 CATCCAGAAGG 4747 >seq12976 Length=6227 Score = 113 bits (124), Expect = 5e-20 Identities = 141/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || ||||| || |||||||| |||| || ||| | | Sbjct 3501 ATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCCGTCG 3560 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||||| | | | | || | ||||||| ||||| || || || |||||| ||||| Sbjct 3561 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCAT-CCCGCCTGACCA 3619 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || |||| ||||| ||| |||||||| Sbjct 3620 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAA 3679 Query 38423 CATCCAAAAGG 38433 |||||| |||| Sbjct 3680 CATCCAGAAGG 3690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499941920235520