Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq30324 426 2e-114 seq15230 306 5e-78 seq27208 219 5e-52 seq34336 190 3e-43 seq22265 183 4e-41 seq20447 86.0 8e-12 >seq30324 Length=24415 Score = 426 bits (472), Expect = 2e-114 Identities = 1056/1587 (67%), Gaps = 29/1587 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 || |||| |||||| ||||| || || || ||||| || || || || | ||| Sbjct 4009 TCGTCTTGATCTTTGTACTTGTCGGCCTCCGCCACCATGCGGTCGATCTCGTCCTGCGAC 4068 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | || |||||| || ||||| ||||| ||||| | || |||| | ||| || | Sbjct 4069 AGTCGCCCCTTGTCGTTCGTGATCGTGATCTTGTTCTCCTTGCCCGTCGACTTCTCCACC 4128 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || | || ||||| || || || |||| ||||| ||| | || | ||| || || | Sbjct 4129 GCCGTCACGTTCAAGATGCCGTTGACATCCACATCAAACGTCACGTCAATCTGCGGCACA 4188 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | ||| || || || || | | ||| | || || | ||| || | Sbjct 4189 CCGCGCGGCATGGGCGGGATGCCGTCCAGGTTAAACTTGCCCAGCAGGTGGTTGTCGCGC 4248 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | || || ||||| | |||| ||| ||| | | || || ||| | Sbjct 4249 GTCATGGAGCGCTCGCCTTCGAACACTTGAATCAACACACCCGACTGGTTGTCTGCGTAC 4308 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||| || ||||| | || | || ||||| | || |||| | |||| Sbjct 4309 GTCGAGAAGGACTGCGTCTTCTTGGCCGGCACGGTAGTATTGCGAGGGATAAGCTTGGTC 4368 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || ||| || ||||| ||||| |||| || | ||| ||||| || | | | Sbjct 4369 ATCACCCCGCCCGCCGTCTCGAGCCCAAGCGACAACGGCGCCACATCCAACAGCAGTAAG 4428 Query 6989 TCTTGAACAGATT------CGTTC--CCTTCACCCGTTAAGATGGCGGCTTGGACCGTCG 7040 || || ||| || ||| | || ||| ||||||| || || ||||| || | Sbjct 4429 TCCTG--CAGCTTGGAAGACGTGCTGCCGCCAC---TTAAGATCGCTGCCTGGACGGTGG 4483 Query 7041 CCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAAT 7100 | ||||| || |||||||| || ||||| |||| || || || || || || || Sbjct 4484 CGCCGTACGCCACCGCCTCGTCCGGGTTGATCGACTTGAAGAGCTCCTTGCCATTGAAGA 4543 Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160 | ||| | || || || | |||||||| || ||||| || || || | ||||| | Sbjct 4544 AGTCCATCAGCAGCTGCTGCACCTTCGGGATGCGCGTCGAGCCGCCAACAAGGACGATCT 4603 Query 7161 CATTCACTTT-CGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 | | ||||| || || | | ||| ||||| || || || |||| || ||||| Sbjct 4604 CGTGCACTTGGCGCTTGGACAA-CTTGGAGTCGCGCAGGACTTGAGCGACGGGCTCCATC 4662 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 || ||||| ||||| ||||| |||||||| || |||||||| |||| | | | Sbjct 4663 GTCTTGCGGAAGAAGTCGCCGCACAGCTCCTCAAAGCGCGCACGGGTGATGGTCGAGTTG 4722 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | |||||| |||| ||| || |||||| | || || | | ||| | | Sbjct 4723 AAGTCGATGCCGTCCAGCAACGTATCGATCTCAATGTACGCCTGCGCTGAGGTAGACAGC 4782 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || |||||||| || || || | ||| || | || |||| ||| | | Sbjct 4783 GTGCGCTTGGCACGCTCACAGGCGGTGCGCAGACGCCGCATCGCGCGCGAGTTGACCGTC 4842 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATC 7458 || || || ||| || || || ||||| | |||| |||| || | || Sbjct 4843 ATGTCCTTGCGATGCTTGCGCTTGAACTCGGCCACGAAGAACTCGACC-AGACGATTGTC 4901 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| |||||||| |||| ||| || ||||| || || ||||| || || ||||| || | Sbjct 4902 GAAGTCTTCACCGCCCAGGTGCGTGTCCCCGGCAGTGGCTTTCACCTCGAAGATGCCCTC 4961 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 |||||| | | || |||||| || ||||| || || || |||||||| || || ||||| Sbjct 4962 TTCAATCGTGAGCAGCGAAACGTCGAACGTGCCTCCGCCAAGGTCAAAGATCAGCACGTT 5021 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 ||| || | || ||| || || ||||||||||| || || ||||| || || || Sbjct 5022 GTGCTCGCCGCCCTT---CTTGTCCAGCCCGTACGCGATGGCGGCGGCCGTCGGCTCGTT 5078 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTT 7697 || || || || ||||| ||| ||||| | ||| || || || |||||||| || | Sbjct 5079 GATGATGCGCAGCACGTTCAAGCCGGCAAT-GACGCCGGCGTCCTTGGTCGCTTGACGCT 5137 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 |||| ||||| ||||||||||| ||||| || ||||||| | | |||| ||| || | Sbjct 5138 GCGAGTCGTTGAAGTAGGCCGGCACCGTCACCACCGCGTTCTTCACTTGCTTCCCAATGA 5197 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 | | || ||||| || ||| ||| | || ||||| || || ||||| || | | | Sbjct 5198 AGGCCTCTGCGATCTCGCGCATCTTGATCAGCACCATGGACGAGATCTCCTCGGGCTGGA 5257 Query 7818 ACTGTTTCGTTTCACCGTTAAAAT-CAACTTCAATCATG-GGTTTATCCGCAGCACCGGG 7875 || || | || || || || | || | | | || | || || | | | | ||| | Sbjct 5258 ACGTCTTGCTCTCGCCCTTGAACTGCACCGTGA--CAAGCGGCTTGTTCTCTGGTCCGCG 5315 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| ||||| ||| ||| | ||| || || || |||| |||| | |||| | Sbjct 5316 GATCACCTTGAACGGCCAGTGTTTGATGTCCGACTGCACCTCCGGGTCGGTGTACTTGCG 5375 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| | |||||| | ||||| || ||||| | | |||||| || |||||||| Sbjct 5376 GCCGATCAAACGCTTCACGTCAAACACCGTGTTGTGCGCGTTCATAGCCACCTGGTTCTT 5435 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || ||||| ||||| | ||| || | ||||| || || |||||||| || ||||| Sbjct 5436 GGCGGCGTCACCGATCAAACGCTC---GGTGTCCGTGAAGGCCACGTACGACGGCGTCGT 5492 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || ||||| || || || || || || ||||| || ||||| ||||| ||||| Sbjct 5493 GCGGTTGCCCTGGTCATTGGCGATGATCTCCACTCGGTCATTCTGCCACACGCCCACGCA 5552 Query 8116 CGAATACGTTGTTCCTAAATCAATACC 8142 ||| ||||| || || | ||||| || Sbjct 5553 CGAGTACGTCGTGCCCAGGTCAATCCC 5579 >seq15230 Length=15392 Score = 306 bits (338), Expect = 5e-78 Identities = 822/1264 (65%), Gaps = 20/1264 (2%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || | | |||| || | || || | || ||||| | || ||| || Sbjct 13605 TTCTTGGTGGGCACCTTCGTGTTGCGCGCGATGAGCGTCGTCATCACCCCGCCCGCCGTA 13664 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || | || ||||||||||| |||||||||| || | || ||| || ||| ||| || Sbjct 13665 TCCATACCCAGAGACAGAGGCGTCACGTCCAGCAGCAGCAAGTCCTG--CAGCTTC--TC 13720 Query 7007 C-------CTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | | || || | | ||||| || ||||| || || ||||| || || ||||| Sbjct 13721 CGACGAGTCATCGCCGCTCAGAATGGCCGCCTGGACGGTGGCACCGTAGGCCACGGCCTC 13780 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 || ||||| |||| || || | || || ||||| || | ||||| | || || || Sbjct 13781 GTCCGGGTTGATCGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCCGACAGCAGCTGCTG 13840 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || ||||| || ||||| || || |||| || | || | ||||| || Sbjct 13841 CACCTTGGGGATCCGCGTCGAGCCGCCCACCAGCACCACCTCGTGCACTTGGCTCTTGGA 13900 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || || || | || |||||||| || ||||| |||| Sbjct 13901 CAGCTTGGCGTCGCGCAGCCCCTTCGCCACCGGTTCCATCGTCTTGCGGAAGTAGTCGGC 13960 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||||| ||||| || || || || || |||| | ||||| || ||||||||| | | Sbjct 13961 GCACAGGTCCTCGAACCGCGCGCGCGTGATGGTCGAGTAGAAGTCCACGCCGTCGAACAG 14020 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 ||| || || || ||| | || || | ||| || | ||| ||||| |||||||| || Sbjct 14021 CGAGTCGATCTCGATGTACGCCTGCGCGGACGACGACAGCGTGCGCTTGGCGCGCTCGCA 14080 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 |||||| || | || || || || ||| |||| | | || || || || || Sbjct 14081 CGCCGTCCGCAGCCGCCGCAGCGCGCGCTGGTTCTGCGTCAGGTCCTTGCGGTGCTTGCG 14140 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || || || || |||| ||| Sbjct 14141 CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTCCTCGCCGCCCAGGTG 14200 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || || || || || || || ||||| || | |||||| | | || ||| || Sbjct 14201 CGTGTCGCCAGCAGTGGCCTTCACCTCGAAGATGCCCTCCTCAATGCTCAGCAGCGACAC 14260 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 || || || || || |||||||| || || || ||||| ||| || | ||||| Sbjct 14261 GTCGAAGGTGCCGCCGCCCAGGTCGAAGATCAGCACGTTGCGCTCGCCGCC---CTTCTT 14317 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || || |||||||| || || || ||||| | || || || ||||| || ||| || Sbjct 14318 GTCCAGCCCGTACGCAATGGCGGCGGCCGTCGCCTCGTTGATGATACGCAGCACGTTGAG 14377 Query 7660 GCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 ||| ||||| | ||| || || || |||||||| || ||||| ||||| ||||||||| Sbjct 14378 GCCGGCAAT-GACGCCGGCGTCCTTGGTCGCTTGACGCTGCGAGTCGTTGCAGTAGGCCG 14436 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 | ||||| | || |||| | |||| | ||| |||| | | || ||||| || || Sbjct 14437 GCACCGTGATCACGGCGTTCTTGACCTCCTTGCCGATGAAGGCCTCGGCGATCTCGCGCA 14496 Query 7779 TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAA 7838 | ||| | || ||||| || || ||||| || | | ||| || | || || || | Sbjct 14497 TCTTGATCAGCACCATGGACGAGATCTCCTCGGGCTGGAACGTCTTGCTCTCGCCCTTGA 14556 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 | | || ||| || || || | || || | | | ||| ||| ||| | | Sbjct 14557 ACTGCACCGTGATCTGCGGCTTGTCGCCTGCGCCCGACGTCAGCTTGAACGGCCAGTGCT 14616 Query 7899 TCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAA 7958 | || ||| || ||| |||| || ||||| | ||||| || ||||| || || | Sbjct 14617 TGATGTCGGTCTGCACCACCGGGTCTGAGAACTTGCGGCCGATCAGGCGCTTGGCGTCGA 14676 Query 7959 AAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTT 8018 | || ||||| | | ||||||||| |||||||| || ||||| ||||| ||||| | Sbjct 14677 ACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCGGCGTCACCGATCAGACGCT 14736 Query 8019 CATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAA 8078 | | ||||| || || |||||||| || ||||| || || || ||||| || || | Sbjct 14737 CGGTR---TCCGTGAAGGCCACGTACGACGGCGTCGTGCGGTTGCCCTGGTCATTGGCGA 14793 Query 8079 TAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAA 8138 | || || || ||||| ||||||| ||||| |||||||| ||||| || || | |||| Sbjct 14794 TGATCTCCACTCGGTC-ATTTGCCACACGCCCACGCACGAGTACGTCGTGCCCAGGTCAA 14852 Query 8139 TACC 8142 | || Sbjct 14853 TCCC 14856 >seq27208 Length=5349 Score = 219 bits (242), Expect = 5e-52 Identities = 416/609 (68%), Gaps = 5/609 (1%) Strand=Plus/Minus Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || || ||||| ||||| || ||||| |||| |||| ||||| ||||| ||| Sbjct 5319 TTCTCCACAGGCTCCATGGTCTTGCGGAAGTAGTCACCGCACATGTCCTCGAAACGGGCA 5260 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || |||| | | ||| || | ||| ||| | | ||| || || || || | Sbjct 5259 CGCGTGATGGTCGAGTTGAAGTCGATGCCATCGAACAGCGAGTCGATCTCGATATACGCC 5200 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | ||| || | ||| ||||| || ||||| |||||||| || | |||||| || Sbjct 5199 TGCGCGGACGACGACAGCGTGCGCTTAGCACGCTCGCACGCCGTACGCAGACGACGGAGA 5140 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG- 7440 |||||| |||| | | || || || || || || || ||||| | | |||||| Sbjct 5139 GCACGCTGGTTGTCAGTGATGTCCTTGCGGTGCTTGCGCTTGAACTCCTGCGTGAAGTGG 5080 Query 7441 TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTT 7500 |||| | || | ||||| || || || |||| ||| || || || || || || || Sbjct 5079 TCGACG-AGACGGTTGTCGAAGTCCTCGCCGCCCAGGTGCGTGTCACCAGCAGTGGCCTT 5021 Query 7501 GACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG 7560 || || ||||| || | |||||| | | || ||| ||||| || || || || ||||| Sbjct 5020 CACCTCGAAGATGCCCTCCTCAATGCTCAGCAGCGACACATCGAAGGTGCCGCCGCCCAG 4961 Query 7561 GTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGC 7620 ||| || || || ||||| ||| | | || ||| || ||||||||||| || || Sbjct 4960 GTCGAAGATCAGCACGTTGCGCTCGCCACCCTT---CTTGTCCAGACCGTACGCAATGGC 4904 Query 7621 CGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATC 7680 || ||||| || || || || ||||| || ||| ||||| || || | | || || Sbjct 4903 GGCGGCCGTCGGCTCGTTGATGATACGCAGCACGTTGAGGCCGGCGATGGCACCGGCGTC 4844 Query 7681 TTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGT 7740 || || || || || ||||| ||||| ||||||||||| ||||| | || |||| | | Sbjct 4843 CTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTAGGCCGGCACCGTGATCACGGCGTTCTT 4784 Query 7741 GACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 ||| | ||| |||| | | || || | || ||| ||| | || ||||| || || Sbjct 4783 GACCTCCTTGCCGATGAAGGCCTCGGCCACCTCGCGCATCTTGATCAGCACCATGGACGA 4724 Query 7801 AATCTCTTC 7809 ||||| || Sbjct 4723 GATCTCCTC 4715 Score = 127 bits (140), Expect = 3e-24 Identities = 148/199 (74%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005 ||||| || || || || ||||| | | ||||||||| |||||||| || ||||| Sbjct 4578 CGCTTGGCGTCGAACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCGGCGTCA 4519 Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065 ||||| ||||| || | | |||| || || |||||||| ||||| || || || || Sbjct 4518 CCGATCAGACGCTCGGTGT---CCGTGAAGGCCACGTACGACGGGGTGGTGCGGTTACCC 4462 Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125 |||||||| || || || || ||||||||||| ||||| || || |||||||| || || Sbjct 4461 TGGTCGTTGGCGATGATCTCCACGCGGTCGTTCTGCCAAACACCCACGCACGAGTAGGTC 4402 Query 8126 GTTCCTAAATCAATACCGA 8144 || || | || || |||| Sbjct 4401 GTGCCAAGGTCGATGCCGA 4383 >seq34336 Length=8677 Score = 190 bits (210), Expect = 3e-43 Identities = 520/792 (66%), Gaps = 26/792 (3%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 ||||| || ||||| || || ||||| || || ||||| || ||||| |||| || || Sbjct 7807 ATGGCCGCCTGGACGGTGGCGCCGTAGGCCACGGCCTCGTCCGGGTTGATCGACTTGTTG 7748 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | ||||| | || || || | || ||||| || ||||| Sbjct 7747 GGCTCCTTGCCGTTCAAGAAGTCCGACAGCAGCTGCTGCACCTTGGGGATCCGCGTCGAG 7688 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 || || |||| || | || | ||| | || | ||| | ||| || | | Sbjct 7687 CCGCCCACCAGCACCACCTCGTGCACCTGGCTCTTGGACAGCTTGGCGTCGCGCGGCGCA 7628 Query 7202 -----TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAAC 7256 || || || || ||||| || ||||| |||| ||||| ||||| || | Sbjct 7627 GCACCTTCTCCACCGGGTCCATCGTCTTGCGGAAGTAGTCGGCGCACAGGTCCTCGAACC 7568 Query 7257 GTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGG 7316 | || || || |||| | | || || ||||||||| | | ||| || || || ||| Sbjct 7567 GCGCGCGCGTGATGGTCGAGTTCAAGTCCACGCCGTCGAACAGCGAGTCGATCTCGATGT 7508 Query 7317 TTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGAC 7376 | || || | ||| || | ||| || || |||||||| |||||||| || | || | Sbjct 7507 ACGCCTGCGCGGACGACGACAGCGTGCGTTTGGCGCGCTCGCACGCCGTCCGCAGCCGCC 7448 Query 7377 GAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGA 7436 | || || ||| |||| | | || || || || || || ||||| | | | Sbjct 7447 GCAGCGCGCGCTGGTTCTGCGTCAGGTCCTTGCGGTGCTTGCGCTTGAACTCCTGCGTAA 7388 Query 7437 AGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGG 7493 ||| |||| ||| | | ||||| || || || |||| ||| || || || || | Sbjct 7387 AGTACTCGACCAGGCGGTTG---TCGAAGTCCTCGCCGCCCAGGTGCGTGTCGCCAGCAG 7331 Query 7494 TCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCAC 7553 | || || || || ||||| || | |||||| | | || ||| || || || ||| Sbjct 7330 TGGCCTTCACCTCGAAGATGCCCTCCTCAATGCTCAGCAGCGACACGTCGAAGGTA---- 7275 Query 7554 CACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACG 7613 |||| || || || ||||| ||| || | || ||| || || ||||||| Sbjct 7274 ------GGTCGAAGATCAGCACGTTGCGCTCGCCGCCCTT---CTTGTCCAGCCCGTACG 7224 Query 7614 CGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG 7673 |||| || || | || || || || || ||||| || ||| ||||| ||||| | | Sbjct 7223 CGATGGCGGCGGGCGGCGGCTCGTTGATGATACGCAGCACGTTGAGGCCGGCAAT-GACG 7165 Query 7674 CCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACC 7732 ||| | || || |||||||| || ||||| ||||| ||||||||||| |||| | || Sbjct 7164 CCGGCGTCCTTGGTCGCTTGACGCTGCGAGTCGTTGAAGTAGGCCGGCACCGCGATCACG 7105 Query 7733 GCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACC 7792 |||| | |||| | ||| |||| | | || ||||| || ||| ||| | || ||| Sbjct 7104 GCGTTCTTGACCTCCTTGCCGATGAAGGCCTCGGCGATCTCGCGCATCTTGATCAGCACC 7045 Query 7793 ATCGATGAAATC 7804 || || || ||| Sbjct 7044 ATGGACGAGATC 7033 >seq22265 Length=659 Score = 183 bits (202), Expect = 4e-41 Identities = 351/516 (68%), Gaps = 21/516 (4%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| || || ||||||||||| || || ||||| || || || || ||||| || | Sbjct 627 TTCTTGTCCAGCCCGTACGCGATGGCGGCGGCCGTCGGCTCGTTGATCATACGCAGCACG 568 Query 7655 TTCAGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || ||||| ||||| | |||| | || || |||||||| || ||||| || || ||||| Sbjct 567 TTGAGGCCGGCAAT-GACGCCGGCGTCCTTGGTCGCTTGACGCTGCGAGTCATTGAAGTA 509 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 |||||| ||||| | || |||| | |||| | ||| |||| | | || ||||| || Sbjct 508 GGCCGGCACCGTGATCACGGCGTTCTTGACCTCCTTGCCGATGAAGGCCTCGGCGATCTC 449 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 ||| ||| | || ||||| | || || |||| || | || || Sbjct 448 GCGCATCTTGATCAGCACCATGGCTGGAACGTCTT-----GC-----------TCTCGCC 405 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893 || || | || ||| || || || | || || | | | || ||| ||| Sbjct 404 CTTGAACTGCACCGTGATCTGCGGCTTGTCGCCTGCGCCCGACGTCAGGTTGAACGGCCA 345 Query 7894 ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 | || || ||| || ||| ||||||| ||||| | ||||| || ||||| || Sbjct 344 GTGCTTGATGTCGGTCTGCACCACCGGGTCCGAGAACTTGCGGCCGATCAGGCGCTTGGC 285 Query 7954 ATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAG 8013 || || || ||||| | | ||||||||| |||||||| || || || ||||| || Sbjct 284 GTCGAACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCGGCTTCACCGATCAG 225 Query 8014 ACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTT 8073 ||| || | | |||| || || |||||||| ||||| || || || || |||||||| Sbjct 224 ACGCTCGGTGT---CCGTGAAGGCCACGTACGACGGGGTGGTGCGGTTACCCTGGTCGTT 168 Query 8074 CGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 || || || || ||||||||||| ||||| ||||| Sbjct 167 GGCGATGATCTCCACGCGGTCGTTCTGCCAAACGCC 132 >seq20447 Length=4630 Score = 86.0 bits (94), Expect = 8e-12 Identities = 221/334 (66%), Gaps = 2/334 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || |||||||| ||| |||||||||||||| ||| | | || || || | || Sbjct 978 TTCTACCAGGCATCGACAAGTGAGCTCTACGGTAAGGTACAAGCCACCCCGCAGGACGAG 1037 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGG-GC 22562 |||| ||||| ||||||| || || || || || || || | | | | ||| || Sbjct 1038 GATACGCCGTTCCACCCGCGGTCGCCCTACGGCGTTGCGAAGCAGTTCGCTTTCTGGAGC 1097 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | ||| || | | ||| | ||||| ||||| || || || || ||||||| || Sbjct 1098 G-TAGTGAACCACCGCGAAGCCTACGGCATGTTCGCCGTGAACGGAATCTTGTTCAATCA 1156 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| ||| | || || || |||||| || || || || || | | ||| | Sbjct 1157 TGAAAGCCCGCGGCGTGGCCCAACCTTCGTCACGCGGAAGATCACTCGTGCTGTGGTGCG 1216 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||||||| | || || | | | || ||||| || || || || || || Sbjct 1217 CATCCGTGCAGGCGTCGAGAAGTGCCTCTTTGTGGGCAACCTCGACGCCAAGCGCGACTG 1276 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGG 22776 ||| || |||||||| ||||| | ||||||||| Sbjct 1277 GGGCCACGCACGCGACTACGTCGAGTGTATGTGG 1310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634839622699520