Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq36271 349 6e-91 seq32329 269 5e-67 seq27878 269 5e-67 seq27877 269 5e-67 seq26115 269 5e-67 seq26881 89.7 1e-12 seq26880 89.7 1e-12 >seq36271 Length=16985 Score = 349 bits (386), Expect = 6e-91 Identities = 712/1044 (68%), Gaps = 33/1044 (3%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| || ||||| ||||||||| ||||||||| ||||| || || || || Sbjct 1481 GTACATGTTGGACGTGTACGGCTCGATGGACTCGTTGTTACCCAGGATTTGAGCCGTCGA 1540 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 ||| || ||||| || || || || || ||| | | ||||||| | | | Sbjct 1541 GGCCGTCGGCATCGGCGCGACGAGCAGCGAGTTGCGGATGCCGTGCTTAATCACGTTCTG 1600 Query 213068 CCGAAGCTCTGCCCAGTCCCATCTGCCAGA--CAGGTCCTCGTCCTTCACGTTCCACATG 213125 | ||| ||||||||||| || || |||| | ||| ||||||| Sbjct 1601 CTTGAGCGTGGCCCAGTCCCACAGCCCCGAATCAGGGG--------TGACGCCCCACATG 1652 Query 213126 TCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGC 213185 || ||||| |||||||| ||||| | || ||||||| | | ||| ||||| || Sbjct 1653 TCGAACTGGAAGATGCCCTTGCTGGCAGGAGAGCCCTGGAACGTCTCGTACGGGCCCAGC 1712 Query 213186 TCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCC 213245 |||||||| | ||| |||| || || || ||||||||| ||||| ||||| |||| | Sbjct 1713 TCCTTGGCGATCTCCATCGACGTCTCCATGGAAGCGTAGTAAATGGTCTCAAAGATCTTC 1772 Query 213246 CTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATC-ATGCGTTGGAACACATC 213304 ||||||||| ||| | ||| | ||| | | | || ||| | |||| | || Sbjct 1773 TTGTTGAGCTCGCGGGCTTGCGGGCTCTCGAACG-CGTAGTCCATGAGGATGAACGCGTC 1831 Query 213305 AGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACT 213363 || || ||||| || ||||| |||| ||| | ||| | || ||| ||| || | || || Sbjct 1832 GGCGAGACCCTGAACGCCGATACCGACGGGGCGGTGGCGCATGTTGGACGTGCGCGC-CT 1890 Query 213364 CCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGG 213423 || ||| |||||| ||||| ||| |||| |||||| ||||||||||| |||| || | Sbjct 1891 CCGCCACGGGGTAGTAGTTGACGTCAATGACCTTGTTCAGGTTGCGGGTCACCACCTTCG 1950 Query 213424 TGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCA 213483 | || | | ||| | | || ||||||||| |||| | ||| || |||| |||| Sbjct 1951 TCACCTCGTACAGCTTGTGGTAGTTGAACACGCCGCCCTCTTCC---ACGAACTTGGGCA 2007 Query 213484 GGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCT 213543 | || | | ||||||||||| ||||||||||| | || | ||||||||||| || Sbjct 2008 GCGCCACGGACGCCAGGTTGCACACGGCCACCTCGTCAGGCGACGAGTACTCCATGACCT 2067 Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGG 213603 | ||||| |||||| | ||||| |||||||||||||| ||||| ||||| ||||| Sbjct 2068 CACAGCACAAGTTGCTCGAGCGGATCGTGCCCAGGTTCTGCTGGTTCGACTTGCGGTTGG 2127 Query 213604 CAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC 213663 | || |||||| | |||||| | || || ||||| | ||||| |||| || | Sbjct 2128 CCGAGTCCTTGAACAGCATGAACGGCACGCCCGTCTCAATCTGGGCGTCCAGGATGGAGA 2187 Query 213664 TCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGC-TCCGGGCGTAGCCTCGTACTGT 213722 ||| || | | || |||| | | | || || ||| | | |||||||| | Sbjct 2188 ACCACAGCTGCTGCGCTTTGATCGTCTTGC-GAGCGCGTCCCTCCTT---CTCGTACTTT 2243 Query 213723 TCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATG-CGGG 213781 ||||| || | | ||| |||| ||||||| | || || ||||| | | ||| Sbjct 2244 TCGTACAGGGCCTCGAACTCGTCGCCCCAGCACTCGTAGAG-CCCGGGCGCCTCGTTGGG 2302 Query 213782 ACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCA 213841 || | ||||||||| | ||||| || ||| | || |||||| || ||||| ||||| Sbjct 2303 GCAGAAGAGGCTCCACTGGCCGTCTGCTTCGACGCGCTTCATGAAGAGATCCGGCACCCA 2362 Query 213842 CAGCGCGGTGAACAGGTCCCTGGTCC---TCCTCTCGTCCACTCCAGAGTTTTTGCGCAG 213898 |||||| ||||||||| | | | | ||||| || ||| || ||||| Sbjct 2363 GAGCGCGTAGAACAGGTCGCGCGCGCGGTGCAGCTCGT---TGCCGTGGTTCTTCCGCAG 2419 Query 213899 ATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958 || || || || || | ||| |||||||| ||||||| ||||||||| || | ||| Sbjct 2420 GTCCAGGAACTCGAACACGTCGGCGTGCCAGGGCTCCAGGTAGATGGCGAACGATCCCTT 2479 Query 213959 CCTCTT---GCCGCCCTGGTCCAC 213979 | ||| ||||||||||||||| Sbjct 2480 GCGCTTGCCGCCGCCCTGGTCCAC 2503 >seq32329 Length=12294 Score = 269 bits (298), Expect = 5e-67 Identities = 568/842 (67%), Gaps = 19/842 (2%) Strand=Plus/Minus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || ||||| | ||||| ||||| || ||||| |||| || |||||| | ||||| Sbjct 11729 GTACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCAT 11670 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTG 47961 || ||| ||||| ||| || | | | || ||||| | | |||||| | Sbjct 11669 CCAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGACG 11610 Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 ||||| || |||||||||| | ||||||| || ||||||||| || || ||| Sbjct 11609 GTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCAC 11550 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 |||| | | | ||||| | ||| ||| ||| || || | ||||||||| | Sbjct 11549 CGGCAGCGAGTCGCACACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTG 11490 Query 48082 AACGCGGGACTCTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAG 48139 |||||| |||| ||| | ||||| ||| ||||| || |||| ||| || ||| Sbjct 11489 CACGCGG--CTCTCAGGCAGCTTGTTCACCAG---CTTGGAGTACAGCAGGCACGCGAAG 11435 Query 48140 TCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATG 48199 ||| |||||| ||| ||||| |||||||||||| |||| ||||||| ||||| ||||| Sbjct 11434 TCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATC 11375 Query 48200 ACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCC 48259 | ||| | || || |||||||| || | ||| ||||| |||||||||||||||||| Sbjct 11374 AGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCC 11315 Query 48260 ACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG---CGTTCTTGTCTGAGATCCAG 48316 || || |||||||| || | ||| | |||| | || | ||| | ||| Sbjct 11314 ACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGCGCGGGTC---GCACCAC 11258 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 |||||||| | ||||||||| | | ||| || |||||||| ||||| || | || Sbjct 11257 TTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGG 11198 Query 48377 TTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCA 48433 | | ||| |||||| | || || |||||||| | ||||| ||| Sbjct 11197 TGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGC---GAGTACACCTCC 11141 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||||||||||||| | |||||| ||||||| Sbjct 11140 GAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGC 11081 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| || ||| ||||| || || || || || || || ||| Sbjct 11080 ACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAG 11021 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613 || || || || || | ||| || |||||||||| | | | |||| ||| Sbjct 11020 AACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTCCTTG 10961 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTAC 48673 | ||| | |||| |||| || || | |||||||| || || || || |||||| Sbjct 10960 AGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTAC 10901 Query 48674 AT 48675 || Sbjct 10900 AT 10899 >seq27878 Length=10574 Score = 269 bits (298), Expect = 5e-67 Identities = 568/842 (67%), Gaps = 19/842 (2%) Strand=Plus/Plus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || ||||| | ||||| ||||| || ||||| |||| || |||||| | ||||| Sbjct 566 GTACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCAT 625 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTG 47961 || ||| ||||| ||| || | | | || ||||| | | |||||| | Sbjct 626 CCAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGACG 685 Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 ||||| || |||||||||| | ||||||| || ||||||||| || || ||| Sbjct 686 GTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCAC 745 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 |||| | | | ||||| | ||| ||| ||| || || | ||||||||| | Sbjct 746 CGGCAGCGAGTCGCACACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTG 805 Query 48082 AACGCGGGACTCTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAG 48139 |||||| |||| ||| | ||||| ||| ||||| || |||| ||| || ||| Sbjct 806 CACGCGG--CTCTCAGGCAGCTTGTTCACCAG---CTTGGAGTACAGCAGGCACGCGAAG 860 Query 48140 TCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATG 48199 ||| |||||| ||| ||||| |||||||||||| |||| ||||||| ||||| ||||| Sbjct 861 TCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATC 920 Query 48200 ACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCC 48259 | ||| | || || |||||||| || | ||| ||||| |||||||||||||||||| Sbjct 921 AGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCC 980 Query 48260 ACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG---CGTTCTTGTCTGAGATCCAG 48316 || || |||||||| || | ||| | |||| | || | ||| | ||| Sbjct 981 ACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGCGCGGGTC---GCACCAC 1037 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 |||||||| | ||||||||| | | ||| || |||||||| ||||| || | || Sbjct 1038 TTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGG 1097 Query 48377 TTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCA 48433 | | ||| |||||| | || || |||||||| | ||||| ||| Sbjct 1098 TGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGC---GAGTACACCTCC 1154 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||||||||||||| | |||||| ||||||| Sbjct 1155 GAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGC 1214 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| || ||| ||||| || || || || || || || ||| Sbjct 1215 ACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAG 1274 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613 || || || || || | ||| || |||||||||| | | | |||| ||| Sbjct 1275 AACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTCCTTG 1334 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTAC 48673 | ||| | |||| |||| || || | |||||||| || || || || |||||| Sbjct 1335 AGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTAC 1394 Query 48674 AT 48675 || Sbjct 1395 AT 1396 >seq27877 Length=1900 Score = 269 bits (298), Expect = 5e-67 Identities = 568/842 (67%), Gaps = 19/842 (2%) Strand=Plus/Plus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || ||||| | ||||| ||||| || ||||| |||| || |||||| | ||||| Sbjct 566 GTACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCAT 625 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTG 47961 || ||| ||||| ||| || | | | || ||||| | | |||||| | Sbjct 626 CCAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGACG 685 Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 ||||| || |||||||||| | ||||||| || ||||||||| || || ||| Sbjct 686 GTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCAC 745 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 |||| | | | ||||| | ||| ||| ||| || || | ||||||||| | Sbjct 746 CGGCAGCGAGTCGCACACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTG 805 Query 48082 AACGCGGGACTCTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAG 48139 |||||| |||| ||| | ||||| ||| ||||| || |||| ||| || ||| Sbjct 806 CACGCGG--CTCTCAGGCAGCTTGTTCACCAG---CTTGGAGTACAGCAGGCACGCGAAG 860 Query 48140 TCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATG 48199 ||| |||||| ||| ||||| |||||||||||| |||| ||||||| ||||| ||||| Sbjct 861 TCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATC 920 Query 48200 ACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCC 48259 | ||| | || || |||||||| || | ||| ||||| |||||||||||||||||| Sbjct 921 AGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCC 980 Query 48260 ACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG---CGTTCTTGTCTGAGATCCAG 48316 || || |||||||| || | ||| | |||| | || | ||| | ||| Sbjct 981 ACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGCGCGGGTC---GCACCAC 1037 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 |||||||| | ||||||||| | | ||| || |||||||| ||||| || | || Sbjct 1038 TTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGG 1097 Query 48377 TTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCA 48433 | | ||| |||||| | || || |||||||| | ||||| ||| Sbjct 1098 TGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGC---GAGTACACCTCC 1154 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||||||||||||| | |||||| ||||||| Sbjct 1155 GAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGC 1214 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| || ||| ||||| || || || || || || || ||| Sbjct 1215 ACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAG 1274 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613 || || || || || | ||| || |||||||||| | | | |||| ||| Sbjct 1275 AACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTCCTTG 1334 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTAC 48673 | ||| | |||| |||| || || | |||||||| || || || || |||||| Sbjct 1335 AGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTAC 1394 Query 48674 AT 48675 || Sbjct 1395 AT 1396 >seq26115 Length=10575 Score = 269 bits (298), Expect = 5e-67 Identities = 568/842 (67%), Gaps = 19/842 (2%) Strand=Plus/Minus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || ||||| | ||||| ||||| || ||||| |||| || |||||| | ||||| Sbjct 10010 GTACTCGCCCACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGCGAGATCATGTCCAT 9951 Query 47902 GAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTG 47961 || ||| ||||| ||| || | | | || ||||| | | |||||| | Sbjct 9950 CCAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCCAACGAGTACAGCAGACG 9891 Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 ||||| || |||||||||| | ||||||| || ||||||||| || || ||| Sbjct 9890 GTCCGCCACAAACTCGATGTACTGGCACATGAGCGTCGAGTTCATGCCGATCAGCTCCAC 9831 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 |||| | | | ||||| | ||| ||| ||| || || | ||||||||| | Sbjct 9830 CGGCAGCGAGTCGCACACGAACTCGTGCTCGATCACCACCGCGTCACGCACAATCTGGTG 9771 Query 48082 AACGCGGGACTCTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAG 48139 |||||| |||| ||| | ||||| ||| ||||| || |||| ||| || ||| Sbjct 9770 CACGCGG--CTCTCAGGCAGCTTGTTCACCAG---CTTGGAGTACAGCAGGCACGCGAAG 9716 Query 48140 TCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATG 48199 ||| |||||| ||| ||||| |||||||||||| |||| ||||||| ||||| ||||| Sbjct 9715 TCCGTGTGCATGCCCTCGTCACGGCTGATGAGCTCGTTCGAGAAGCTCAGACCGGGCATC 9656 Query 48200 ACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCC 48259 | ||| | || || |||||||| || | ||| ||||| |||||||||||||||||| Sbjct 9655 AGCCCGCGCTTCTTCAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCC 9596 Query 48260 ACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG---CGTTCTTGTCTGAGATCCAG 48316 || || |||||||| || | ||| | |||| | || | ||| | ||| Sbjct 9595 ACAGCGGCGAACGCCAGCAGGCGCTCCGGGTAAGACGACACGCGCGGGTC---GCACCAC 9539 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 |||||||| | ||||||||| | | ||| || |||||||| ||||| || | || Sbjct 9538 TTGAGCGCCCACTGGGCCTTCTTCGTCACGCACGGGATCGTCTCGATGGCGCGCAGCAGG 9479 Query 48377 TTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCA 48433 | | ||| |||||| | || || |||||||| | ||||| ||| Sbjct 9478 TGGTCCTTCTCGATCGCGTCCTTGATGTACGTGTCGATGAGCAGC---GAGTACACCTCC 9422 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||||||||||||||| | |||||| ||||||| Sbjct 9421 GAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGCAGCGGGCCTCGGGCACCTGC 9362 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| || ||| ||||| || || || || || || || ||| Sbjct 9361 ACCTCGTTACTGAAGTTCATGGCCAGGTTCTCGTTCACAATGCCGTCGCTGGCCGCGAAG 9302 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613 || || || || || | ||| || |||||||||| | | | |||| ||| Sbjct 9301 AACGCCAGCACCGTCTTGATGAAGTGACGCTCGTTGTCCGACAAATTGGCCCAGTCCTTG 9242 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTAC 48673 | ||| | |||| |||| || || | |||||||| || || || || |||||| Sbjct 9241 AGGTCGTGCACCAGATCCAGCTCCTCGGCCGTCCAGAACGAAGCCTCCGCCTTCTTGTAC 9182 Query 48674 AT 48675 || Sbjct 9181 AT 9180 >seq26881 Length=8766 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 38816 GTCAGGCTTGGGTAGACCCACATCTGGTCCCATGCACCACTCCACGGGCATGTCAGGTTT 38875 ||| |||||||| || ||||| || || || |||||| || | || ||| || || Sbjct 8005 GTCCGGCTTGGGCAGCCCCACCTCAGGCGCCCAGCACCAGTCAATGGACATTTCGCTCTT 8064 Query 38876 CGCG-CTGCTGAATGCCACACCGGAGAATGCGTACCTGTCCAACACCAGGCTCGTCCCCC 38934 ||| ||| ||| ||||| ||| ||| | ||| | ||||| ||| | || |||| | Sbjct 8065 GGCGGCTGA-GAAAGCCACGCCGCTGAACGAGTAGCGGTCCATCACAATATTCTTCCCAC 8123 Query 38935 GTTCCAGCTTCTGCTTCATCAGGGGCACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGT 38994 ||||| || ||| || | || |||||| | ||||||||||||||||||| Sbjct 8124 TGGCCAGCAAGGACTCAATCTTGGCCGCCGCCTCCCAGCGATTGGCGGAGAAGAGCAGGT 8183 Query 38995 GGACTGCGTGGTCGTCCA 39012 ||| ||||||||||||| Sbjct 8184 GGATGGCGTGGTCGTCCA 8201 >seq26880 Length=9777 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 38816 GTCAGGCTTGGGTAGACCCACATCTGGTCCCATGCACCACTCCACGGGCATGTCAGGTTT 38875 ||| |||||||| || ||||| || || || |||||| || | || ||| || || Sbjct 8005 GTCCGGCTTGGGCAGCCCCACCTCAGGCGCCCAGCACCAGTCAATGGACATTTCGCTCTT 8064 Query 38876 CGCG-CTGCTGAATGCCACACCGGAGAATGCGTACCTGTCCAACACCAGGCTCGTCCCCC 38934 ||| ||| ||| ||||| ||| ||| | ||| | ||||| ||| | || |||| | Sbjct 8065 GGCGGCTGA-GAAAGCCACGCCGCTGAACGAGTAGCGGTCCATCACAATATTCTTCCCAC 8123 Query 38935 GTTCCAGCTTCTGCTTCATCAGGGGCACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGT 38994 ||||| || ||| || | || |||||| | ||||||||||||||||||| Sbjct 8124 TGGCCAGCAAGGACTCAATCTTGGCCGCCGCCTCCCAGCGATTGGCGGAGAAGAGCAGGT 8183 Query 38995 GGACTGCGTGGTCGTCCA 39012 ||| ||||||||||||| Sbjct 8184 GGATGGCGTGGTCGTCCA 8201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931102804459520