Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq30324 365 6e-96 seq15230 208 1e-48 seq27208 179 5e-40 seq30472 134 2e-26 seq35386 127 3e-24 seq12976 127 3e-24 seq34336 116 5e-21 seq32285 116 5e-21 seq36549 109 7e-19 seq36271 100 4e-16 seq22780 84.2 3e-11 seq17832 84.2 3e-11 >seq30324 Length=24415 Score = 365 bits (404), Expect = 6e-96 Identities = 1035/1575 (66%), Gaps = 30/1575 (2%) Strand=Plus/Minus Query 195317 GGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAAT 195376 || || || ||||| || || || || ||||| ||||| || || ||||| ||| | ||| Sbjct 5567 GGCACGACGTACTCGTGCGTGGGCGTGTGGCAGAATGACCGAGTGGAGATCATCGCCAAT 5508 Query 195377 GACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTT 195436 ||||| || ||||| || || || |||||||| ||||| || || | || ||| | | Sbjct 5507 GACCAGGGCAACCGCACGACGCCGTCGTACGTGGCCTTCACGGACACCGAGCGTTTGATC 5448 Query 195437 GGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAG 195496 || || ||||| || || ||| ||||||||| | ||| || || ||||||| |||| Sbjct 5447 GGTGACGCCGCCAAGAACCAGGTGGCTATGAACGCGCACAACACGGTGTTTGACGTGAAG 5388 Query 195497 CGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCT 195556 ||| | || || ||||||| | || | | || || || || || ||||| | Sbjct 5387 CGTTTGATCGGCCGCAAGTACACCGACCCGGAGGTGCAGTCGGACATCAAACACTGGCCG 5328 Query 195557 TATGAAGTTGTTCC-CGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGA 195615 | | ||| || ||| ||| | | ||||| | | | || | || | || || Sbjct 5327 T-TCAAGGTGATCCGCGGACCAGAGAACAAGCCGCTTGTCACGGTGCAGTTCAAGGGCGA 5269 Query 195616 GAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGA 195674 || | || | || | ||||| || || ||||| |||||| |||| |||||| |||| Sbjct 5268 GA-GCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAAGATGCGCGAGA 5210 Query 195675 CTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACT 195734 || || | ||||| || || ||||| | || || ||||| || || || |||| Sbjct 5209 TCGCAGAGGCCTTCATTGGGAAGCAAGTGAAGAACGCGGTGGTGACGGTGCCGGCCTACT 5150 Query 195735 TCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC 195794 ||| || || || || || ||||| |||||||| | | ||||| || | ||| | Sbjct 5149 TCAACGACTCGCAGCGTCAAGCGACCAAGGACGCCGGCGTCATTGCCGGCTTGAACGTGC 5090 Query 195795 TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGG 195854 | | || ||||| || || || || || || || || || || ||||||||| |||| Sbjct 5089 TGCGCATCATCAACGAGCCGACGGCCGCCGCCATCGCGTACGGGCTGGACAAG---AAGG 5033 Query 195855 ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTC 195914 || || | || || |||||||||| || || || || ||||| || || || || | Sbjct 5032 GCGGCGAGCACAACGTGCTGATCTTTGACCTTGGCGGAGGCACGTTCGACGTTTCGCTGC 4973 Query 195915 TCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTG 195974 ||| ||||||| || || ||||| || || || ||||| || || || || || || | Sbjct 4972 TCACGATTGAAGAGGGCATCTTCGAGGTGAAAGCCACTGCCGGGGACACGCACCTGGGCG 4913 Query 195975 GTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTCCGTCGAAAGAAT 196033 ||||||| ||||| ||||| || || || || | |||||| || ||| || Sbjct 4912 GTGAAGACTTCGACAATCGTCTGGTCGAGTTCTTCGT-GGCCGAGTTCAAGCGCAAGCAT 4854 Query 196034 AAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGT 196093 || || || | | || | | || | || || || | || || ||||| ||| Sbjct 4853 CGCAAGGACATGACGGTCAACTCGCGCGCGATGCGGCGTCTGCGCACCGCCTGTGAGCGT 4794 Query 196094 GCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGAC 196153 ||||| || || || ||| | | || || | ||||||| ||| ||||| | ||| Sbjct 4793 GCCAAGCGCACGCTGTCTACCTCAGCGCAGGCGTACATTGAGATCGATACGTTGCTGGAC 4734 Query 196154 GGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTG 196213 || || |||||| | | || || |||||||| || ||||| ||| | | || || Sbjct 4733 GGCATCGACTTCAACTCGACCATCACCCGTGCGCGCTTTGAGGAGCTGTGCGGCGACTTC 4674 Query 196214 TTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCT 196273 || | ||| ||||| || || | ||||| || || ||| | ||| || ||| Sbjct 4673 TTCCGCAAGACGATGGAGCCCGTCGCTCAAGTCCTGCGCGACTCCAAGTTGTCCAAGCGC 4614 Query 196274 AAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATG 196333 | || | || || |||||||| || || || || || || |||||| | || ||| || Sbjct 4613 CAAGTGCACGAGATCGTCCTTGTTGGCGGCTCGACGCGCATCCCGAAGGTGCAGCAGCTG 4554 Query 196334 CTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTT 196393 || |||||||||| || || | ||| ||||||||||||| || || || Sbjct 4553 CTGATGGACTTCTTCAATGGCAAGGAGCTCTTCAAGTCGATCAACCCGGACGAGGCGGTG 4494 Query 196394 GCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAA 196453 || || || || |||| ||||| || | ||| | ||| | | | | | ||||| Sbjct 4493 GCGTACGGCGCCACCGTCCAGGCAGCGA---TCTTAAGTGGCGGC-AGCACGTCTTCCAA 4438 Query 196454 GAT------CTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGG 196506 | | ||| ||||| | ||||| || || | || || || || || || ||||| Sbjct 4437 GCTGCAGGACTTACTGCTGTTGGATGTGGCGCCGTTGTCGCTTGGGCTCGAGACGGCGGG 4378 Query 196507 TGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGT 196566 || || ||||| || |||| | | || || || | ||| | |||||| || Sbjct 4377 CGGGGTGATGACCAAGCTTATCCCTCGCAATACTACCGTGCCGGCCAAGAAGACGCAGTC 4318 Query 196567 CTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACG 196626 ||| || ||||| | || || || | ||||| |||||||| | ||||| || || Sbjct 4317 CTTCTCGACGTACGCAGACAACCAGTCGGGTGTGTTGATTCAAGTGTTCGAAGGCGAGCG 4258 Query 196627 CTCC----CGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGACGGGGATTCCA 196681 |||| || || || ||||| || || || || ||| | ||| || || || Sbjct 4257 CTCCATGACGCGC----GACAACCACCTGCTGGGCAAGTTTAACCTGGAC-GGCATCCCG 4203 Query 196682 GCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATT 196741 | || | ||||| || |||||| | || || ||| | || | || || || Sbjct 4202 CCCATGCCGCGCGGTGTGCCGCAGATTGACGTGACGTTTGATGTGGATGTCAACGGCATC 4143 Query 196742 CTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAAT 196801 | ||||| || || | ||| ||| | | ||||| | ||||| ||| || || Sbjct 4142 TTGAACGTGACGGCGGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCACGATCACGAAC 4083 Query 196802 GACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTAC 196861 ||||||||||| || || |||| || || || || ||||| || || || |||||| Sbjct 4082 GACAAGGGGCGACTGTCGCAGGACGAGATCGACCGCATGGTGGCGGAGGCCGACAAGTAC 4023 Query 196862 AGGGAAGAAGACGAG 196876 | || |||||||| Sbjct 4022 AAAGATCAAGACGAG 4008 >seq15230 Length=15392 Score = 208 bits (230), Expect = 1e-48 Identities = 452/670 (67%), Gaps = 8/670 (1%) Strand=Plus/Minus Query 195317 GGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAAT 195376 || || || ||||| || || || || ||||||| ||| || || ||||| ||| | ||| Sbjct 14844 GGCACGACGTACTCGTGCGTGGGCGTGTGGCAAA-TGACCGAGTGGAGATCATCGCCAAT 14786 Query 195377 GACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTT 195436 ||||| || ||||| || || || |||||||| ||||| || || | || ||||| | Sbjct 14785 GACCAGGGCAACCGCACGACGCCGTCGTACGTGGCCTTCACGGAYACCGAGCGTCTGATC 14726 Query 195437 GGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAG 195496 || || ||||| || || ||| || |||||| | ||| || || || ||||| ||| Sbjct 14725 GGTGACGCCGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTGTTCGACGCCAAG 14666 Query 195497 CGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCT 195556 || || || || |||||||| || || | || || ||| || ||| ||||| | Sbjct 14665 CGCCTGATCGGCCGCAAGTTCTCAGACCCGGTGGTGCAGACCGACATCAAGCACTGGCCG 14606 Query 195557 TATGAAGTTGTTCCCGGT-GTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGA 195615 | | ||| || ||| | | || ||||| ||| | || | || | || || Sbjct 14605 T-TCAAGCTGACGTCGGGCGCAGGCGACAAGCCGCAGATCACGGTGCAGTTCAAGGGCGA 14547 Query 195616 GAAGAAACAATTTGCT-CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGA 195674 || | || | || | ||||| || || ||||| |||||| |||| |||||| |||| Sbjct 14546 GA-GCAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAAGATGCGCGAGA 14488 Query 195675 CTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACT 195734 || || | ||||| || || || || | || || | || || || || |||| Sbjct 14487 TCGCCGAGGCCTTCATCGGCAAGGAGGTCAAGAACGCCGTGATCACGGTGCCGGCCTACT 14428 Query 195735 TCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC 195794 || || || || || || ||||| |||||||| | | ||||| || || ||| | Sbjct 14427 GCAACGACTCGCAGCGTCAAGCGACCAAGGACGCCGGCGTCATTGCCGGCCTCAACGTGC 14368 Query 195795 TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGG 195854 | | || ||||| || | || || || || ||||| || || ||||||||| |||| Sbjct 14367 TGCGTATCATCAACGAGGCGACGGCCGCCGCCATTGCGTACGGGCTGGACAAG---AAGG 14311 Query 195855 ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTC 195914 || || || || ||||||| || || || || || || || || || || || | Sbjct 14310 GCGGCGAGCGCAACGTGCTGATCTTCGACCTGGGCGGCGGCACCTTCGACGTGTCGCTGC 14251 Query 195915 TCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTG 195974 | | ||||| | || || ||||| || ||||| |||||||| || || || || || | Sbjct 14250 TGAGCATTGAGGAGGGCATCTTCGAGGTGAAGGCCACTGCTGGCGACACGCACCTGGGCG 14191 Query 195975 GTGAAGATTT 195984 | || || || Sbjct 14190 GCGAGGACTT 14181 Score = 91.5 bits (100), Expect = 2e-13 Identities = 239/365 (65%), Gaps = 0/365 (0%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || || ||||| |||| || || || || ||||| || || || || || | || Sbjct 14104 GCGCTGCGGCGGCTGCGGACGGCGTGCGAGCGCGCCAAGCGCACGCTGTCGTCGTCCGCG 14045 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || | | ||||| || ||| |||| ||||| | |||||||| | || || || Sbjct 14044 CAGGCGTACATCGAGATCGACTCGCTGTTCGACGGCGTGGACTTCTACTCGACCATCACG 13985 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 || || || || || || | | | || | || | ||| |||||||| || | Sbjct 13984 CGCGCGCGGTTCGAGGACCTGTGCGCCGACTACTTCCGCAAGACGATGGAACCGGTGGCG 13925 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | | || || ||||| ||| || ||| | || | || | || || ||||| Sbjct 13924 AAGGGGCTGCGCGACGCCAAGCTGTCCAAGAGCCAAGTGCACGAGGTGGTGCTGGTGGGC 13865 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || || || || || ||| | || ||| |||| || ||||||||| || || Sbjct 13864 GGCTCGACGCGGATCCCCAAGGTGCAGCAGCTGCTGTCGGACTTCTTCAACGGCAAGGAG 13805 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| ||||||||||||| || || || || || ||||| |||| ||||| || Sbjct 13804 CCCAACAAGTCGATCAACCCGGACGAGGCCGTGGCCTACGGTGCCACCGTCCAGGCGGCC 13745 Query 196421 ATTCT 196425 ||||| Sbjct 13744 ATTCT 13740 >seq27208 Length=5349 Score = 179 bits (198), Expect = 5e-40 Identities = 420/633 (66%), Gaps = 3/633 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| || || ||||| |||||| |||| |||||| ||| || || | ||||| Sbjct 4712 CCCGAGGAGATCTCGTCCATGGTGCTGATCAAGATGCGCGAGGTGGCCGAGGCCTTCATC 4771 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || || || || | || || | || || || || ||||||| || || || || Sbjct 4772 GGCAAGGAGGTCAAGAACGCCGTGATCACGGTGCCGGCCTACTTCAACGACTCGCAGCGC 4831 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | ||| || || || || ||| || | || ||||| || Sbjct 4832 CAGGCCACCAAGGACGCCGGTGCCATCGCCGGCCTCAACGTGCTGCGTATCATCAACGAG 4891 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || ||||| || |||||||||||| |||| | || || || Sbjct 4892 CCGACGGCCGCCGCCATTGCGTACGGTCTGGACAAG---AAGGGTGGCGAGCGCAACGTG 4948 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 ||||||| || || || || || || || ||||| || || || | ||||| | || Sbjct 4949 CTGATCTTCGACCTGGGCGGCGGCACCTTCGATGTGTCGCTGCTGAGCATTGAGGAGGGC 5008 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCA 195991 || ||||| || ||||| ||||||||||| || || || || || || || ||||| Sbjct 5009 ATCTTCGAGGTGAAGGCCACTGCTGGTGACACGCACCTGGGCGGCGAGGACTTCGACAAC 5068 Query 195992 CGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGA 196051 ||||| || || || | | |||||| || ||| | || || || ||| Sbjct 5069 CGTCTCGTCGACCACTTCACGCAGGAGTTCAAGCGCAAGCACCGCAAGGACATCACTGAC 5128 Query 196052 AATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCT 196111 || | | ||||| ||||| || | || || || || ||||| || || || || || Sbjct 5129 AACCAGCGTGCTCTCCGTCGTCTGCGTACGGCGTGCGAGCGTGCTAAGCGCACGCTGTCG 5188 Query 196112 TCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA 196171 || | || || | | ||||| || ||| |||| || || || |||||| | | Sbjct 5189 TCGTCCGCGCAGGCGTATATCGAGATCGACTCGCTGTTCGATGGCATCGACTTCAACTCG 5248 Query 196172 ACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAA 196231 || || || ||||| ||||| || || | | ||| | || | ||| ||||| Sbjct 5249 ACCATCACGCGTGCCCGTTTCGAGGACATGTGCGGTGACTACTTCCGCAAGACCATGGAG 5308 Query 196232 CCTGTTGAACAAGTACTTCGTGACGCAAAGATG 196264 ||||| || | || || |||||||| ||| || Sbjct 5309 CCTGTGGAGAAGGTGCTGCGTGACGCCAAGCTG 5341 >seq30472 Length=20972 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| ||||| || ||| | || Sbjct 12449 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCTTCG 12390 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | |||||||| |||| || || ||||||||||||||||| || || || ||| Sbjct 12389 GACTCGATCGATAATGTCAAGCAGAAAATCCAAGATAAGGAAGGCATCCCGCCTGACCAG 12330 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| || || || ||||| || || || ||||| || || |||||| Sbjct 12329 CAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTGAGCGACTACAAC 12270 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || | ||| | || || | || || ||||| Sbjct 12269 ATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCGTCTGCGCGGTGG 12223 Score = 125 bits (138), Expect = 9e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| ||||| || ||| | || Sbjct 11993 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCTTCG 11934 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| || |||| || || ||||| ||||||||||| ||||| || ||| Sbjct 11933 GACTCGATCGACAATGTCAAGCAGAAAATCCAAGACAAGGAAGGCATCCCACCTGACCAG 11874 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || ||||| || || |||||| Sbjct 11873 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGCTAAGCGACTACAAC 11814 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || | ||| | || || | ||||| || || Sbjct 11813 ATCCAGAAGGAGTCAACGTTGCACTTGGTGCTGCGTCTTCGTGGCGG 11767 >seq35386 Length=12911 Score = 127 bits (140), Expect = 3e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||||| || ||||| || ||||| ||||| || ||| |||| Sbjct 4558 ATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCCGTCG 4617 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || ||||||||||| || || || ||| Sbjct 4618 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGACCAG 4677 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | || |||||| Sbjct 4678 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 4737 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 4738 ATCCAGAAGG 4747 >seq12976 Length=6227 Score = 127 bits (140), Expect = 3e-24 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||||| || ||||| || ||||| ||||| || ||| |||| Sbjct 3501 ATGCAGATCTTTGTGAAAACCCTGACGGGAAAGACCATCACGCTCGATGTGGAGCCGTCG 3560 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || ||||||||||| || || || ||| Sbjct 3561 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGACCAG 3620 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||| | || |||||| Sbjct 3621 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 3680 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 3681 ATCCAGAAGG 3690 >seq34336 Length=8677 Score = 116 bits (128), Expect = 5e-21 Identities = 499/790 (63%), Gaps = 18/790 (2%) Strand=Plus/Plus Query 195641 ATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACT 195700 || ||||| |||||| |||| |||||| |||| || || | ||||| || || Sbjct 7034 ATCTCGTCCATGGTGCTGATCAAGATGCGCGAGATCGCCGAGGCCTTCATCGGCAAGGAG 7093 Query 195701 GTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACA 195760 || || | || || | | || || || ||||||| || || || || || ||||| Sbjct 7094 GTCAAGAACGCCGTGATCGCGGTGCCGGCCTACTTCAACGACTCGCAGCGTCAAGCGACC 7153 Query 195761 AAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCG 195820 |||||||| | | ||||| || || ||| || | || ||||| || || | | Sbjct 7154 AAGGACGCCGGCGTCATTGCCGGCCTCAACGTGCTGCGTATCATCAACGAGCCGCCGCCC 7213 Query 195821 GCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTT 195880 || || || || || || ||||||||| |||| || || || || ||||||| Sbjct 7214 GCCGCCATCGCGTACGGGCTGGACAAG---AAGGGCGGCGAGCGCAACGTGCTGATCTTC 7270 Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 || | ||| || || || || || || | ||||| | || || ||||| Sbjct 7271 GACC----------TACCTTCGACGTGTCGCTGCTGAGCATTGAGGAGGGCATCTTCGAG 7320 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC 196000 || ||||| |||||||| || || || || || || || || ||||| || || || Sbjct 7321 GTGAAGGCCACTGCTGGCGACACGCACCTGGGCGGCGAGGACTTCGACAACCGCCTGGTC 7380 Query 196001 CGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGG 196060 | || | | |||||| || ||| | || || | | || | | Sbjct 7381 GAGTACTTTACGCAGGAGTTCAAGCGCAAGCACCGCAAGGACCTGACGCAGAACCAGCGC 7440 Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || || ||||| |||| || || || || |||||||| || || || || | || Sbjct 7441 GCGCTGCGGCGGCTGCGGACGGCGTGCGAGCGCGCCAAACGCACGCTGTCGTCGTCCGCG 7500 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || | | ||||| || ||| |||| ||||| | ||||| | | || || || Sbjct 7501 CAGGCGTACATCGAGATCGACTCGCTGTTCGACGGCGTGGACTTGAACTCGACCATCACG 7560 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 || || || || || || | | | || | || | ||| ||||| || || || Sbjct 7561 CGCGCGCGGTTCGAGGACCTGTGCGCCGACTACTTCCGCAAGACGATGGACCCGGTGGAG 7620 Query 196241 CAAGTACT-----TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTG 196295 | || || || ||||| ||| || ||| |||| | || | || || | Sbjct 7621 AAGGTGCTGCGCCGCGCGACGCCAAGCTGTCCAAGAGCCAGGTGCACGAGGTGGTGCTGG 7680 Query 196296 TGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATA 196355 |||| || || || || || || ||| | || ||| |||| || |||||| || | Sbjct 7681 TGGGCGGCTCGACGCGGATCCCCAAGGTGCAGCAGCTGCTGTCGGACTTCTTGAACGGCA 7740 Query 196356 AAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGG 196415 | || ||||| ||||||||||||| || || || || || || || |||| |||| Sbjct 7741 AGGAGCCCAACAAGTCGATCAACCCGGACGAGGCCGTGGCCTACGGCGCCACCGTCCAGG 7800 Query 196416 CTGCTATTCT 196425 | || ||||| Sbjct 7801 CGGCCATTCT 7810 >seq32285 Length=18199 Score = 116 bits (128), Expect = 5e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| |||| Sbjct 8576 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACGATCACGCTAGATGTGGAGCCGTCG 8517 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || ||||| ||||| ||||| || || || ||| Sbjct 8516 GACTCGATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 8457 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || |||||| Sbjct 8456 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGAGCGACTACAAC 8397 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| || || Sbjct 8396 ATCCAGAAGGAGTCTACACTGCACCTGGTGCT 8365 Score = 93.3 bits (102), Expect = 6e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 171910 GTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATT 171969 || ||| |||| ||| | ||||| ||| | || || || ||||| ||||| ||||| Sbjct 7844 GTGGAGCCGTCGGACTCGATCGACAACGTGAAGCAGAAAATCCAAGACAAGGAGGGCATC 7785 Query 171970 CCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTC 172029 || || || ||||| || || || || || || || ||||| || ||||| || || || Sbjct 7784 CCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTG 7725 Query 172030 GCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || |||||| | || ||||||||||| || ||||| || || Sbjct 7724 AGCGACTACAACATCCAGAAGGAGTCTACACTGCACCTGGTGCT 7681 >seq36549 Length=11370 Score = 109 bits (120), Expect = 7e-19 Identities = 362/552 (66%), Gaps = 21/552 (4%) Strand=Plus/Minus Query 198449 ATTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTT 198508 |||||||||||| | ||| | ||| || ||| | ||| || |||| | || || || Sbjct 4464 ATTCAAGGATGTGGCTGGTGTGGACGAGGCCAAGAAGGAGATCATGGAGTTCGTGGACTT 4405 Query 198509 TCTTAAAAACCCCGAAAAGTACT--ATGGA-AGTGGTGCCCGAATCCCACGTGGTGCTCT 198565 ||| |||| | ||| || | | | ||| ||| ||||| || || || Sbjct 4404 CCTTCGCAACC---AGAAGCGCTTCACGCAGCTTGGCGCCAAGATCCCCAAGGGCGCGCT 4348 Query 198566 TCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATC 198625 || | ||| | || ||||| ||||| || || || || || | || ||||| | Sbjct 4347 GCTTGTCGGCCCGCCCGGTACGGGTAAGACGCTGCTGGCCAAGGCCACGGCTGGTGAGGC 4288 Query 198626 GAGTGTCCCCTTTCTTCAG-TGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTG 198684 |||||| || |||||||| || | || ||||||||||||||||| ||||| | Sbjct 4287 GAGTGT-GCCGTTCTTCAGCATTTCTGGCTCGGACTTCATCGAGATGTTCGTCGGTGTGG 4229 Query 198685 GTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCT 198744 || | ||| || || || || || || | || || | || || || ||| | | Sbjct 4228 GTCCGTCGCGTGTGCGTGACCTGTTCAAGGAGGCGCGCGCGAACGCCCCGTGCATCGTGT 4169 Query 198745 TCATTGATGAGATTGACGCTGTTG---GT--AAGAAGCGTGGTGGAACTACTACACCTGG 198799 |||| |||||||| || ||||| | || | ||||| || | |||| | | || Sbjct 4168 TCATCGATGAGATCGATGCTGTGGCGCGTTCACGAAGCAAGG-GCAACT-TTTCGGGCGG 4111 Query 198800 TAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGA--- 198856 ||| || |||||||| | ||| | |||||||| || ||||||||||| || | Sbjct 4110 TAACGACGAGCGTGAAAATACGCTCAACCAGCTGCTAGTGGAGATGGATGGCTTCAACTC 4051 Query 198857 CAATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGC 198916 || ||| || | |||||| | |||| |||||| | |||||| || || | || Sbjct 4050 CAGTGA---AGGCGTGGTGGTGCTGGCTGGTACAAACCGCGCTGATATTCTGGACAAGGC 3994 Query 198917 ACTGCTTCGTCCCGGTCGATTCGACCGTAAGATTCAAGTGTCCCTTCCAAGTGTCAAGGG 198976 | || ||||| |||||||||||||| |||| ||| | | || | ||||||| Sbjct 3993 CATCCTGCGTCCTGGTCGATTCGACCGGCAGATCACCGTGGACGTCCCGGATATCAAGGG 3934 Query 198977 CCGCCTCAAGAT 198988 ||| | | |||| Sbjct 3933 CCGTCGCGAGAT 3922 >seq36271 Length=16985 Score = 100 bits (110), Expect = 4e-16 Identities = 253/380 (67%), Gaps = 10/380 (3%) Strand=Plus/Minus Query 78041 ATGTTTATTCACGCA----ACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGAT 78096 |||||| |||||||| || || || |||| || || || || || ||||| ||| | Sbjct 2773 ATGTTT-TTCACGCACGCGACGCCCACGCTGTTCAACGCCGGCACGCCGCGTCCTCAGCT 2715 Query 78097 GTCATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCT 78156 || || || ||||| || || | |||| ||||| ||| | || || |||| || || Sbjct 2714 CTCGTCCTGCTTCCTCCTGGCCATGCAGGACGACTCGATTGAGGGCATTTACGACACACT 2655 Query 78157 CACAGAGTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA-TATTCACGATG 78215 | ||||||| || || |||||||| || || || || | ||| ||| ||| || Sbjct 2654 GAAGCAGTGTGCGTGTATCTCCAAGTGGGCGGGCGGGATTGG-CATCAGTATGCACAATA 2596 Query 78216 TTCGTGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTA 78275 | ||||| | || | ||| | || || ||||| || | || || || || | Sbjct 2595 TCCGTGCGACGAACAGCTACATTCGCGGCACGAATGGCTCCTCCAACGGCATCATCCCCA 2536 Query 78276 TGCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG---AAGG 78332 |||| | || || || | || ||||| || || |||| | || | | | |||| Sbjct 2535 TGCTGCGTGTGTTTAACGACACGGCACGATACGTGGACCAGGGCGGCGGCAAGCGCAAGG 2476 Query 78333 GGTCATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTC 78392 | || ||||| || ||||| || || ||||||||||| || | || || |||| || | Sbjct 2475 GATCGTTCGCCATCTACCTGGAGCCCTGGCACGCCGACGTGTTCGAGTTCCTGGACCTGC 2416 Query 78393 GTCTCAACCAGGGTGACGAG 78412 | ||||| || ||||| Sbjct 2415 GGAAGAACCACGGCAACGAG 2396 >seq22780 Length=3860 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/164 (72%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 182939 CTTTCCCCGAAGTGGAAAGACGCCGTAATGATCCCTTCCAACAACAGAGAGGCCAGCGAC 182998 ||| || || | |||||||||||||||| || || |||||||||| || || | || Sbjct 869 CTTACCACGCAAGGGAAAGACGCCGTAATAGTCTCTGCCAACAACAGCAAGACCGCCCAC 810 Query 182999 AGCGAGTGTCTTTGCCGAGTCACCCTCTGTCACGATGA--GTGTACACTTAGAAGATTGG 183056 |||| ||||| |||||||| || ||||| | ||| | ||| | | | | || Sbjct 809 CGCGACCGTCTTGGCCGAGTCTCCTTCTGTGAGGATCAACGTGCAGTCCTTGCCCTTT-- 752 Query 183057 GCTGTCCCAGCTTTGTTTGCGTCATCAAGCTTGGGAATACCAGT 183100 || || ||||| | ||| || ||||| ||||| |||||||| || Sbjct 751 GCCGTACCAGCGTGGTTCGCATCATCCAGCTTCGGAATACCCGT 708 >seq17832 Length=15358 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/164 (72%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 182939 CTTTCCCCGAAGTGGAAAGACGCCGTAATGATCCCTTCCAACAACAGAGAGGCCAGCGAC 182998 ||| || || | |||||||||||||||| || || |||||||||| || || | || Sbjct 14614 CTTACCACGCAAGGGAAAGACGCCGTAATAGTCTCTGCCAACAACAGCAAGACCGCCCAC 14673 Query 182999 AGCGAGTGTCTTTGCCGAGTCACCCTCTGTCACGATGA--GTGTACACTTAGAAGATTGG 183056 |||| ||||| |||||||| || ||||| | ||| | ||| | | | | || Sbjct 14674 CGCGACCGTCTTGGCCGAGTCTCCTTCTGTGAGGATCAACGTGCAGTCCTTGCCCTTT-- 14731 Query 183057 GCTGTCCCAGCTTTGTTTGCGTCATCAAGCTTGGGAATACCAGT 183100 || || ||||| | ||| || ||||| ||||| |||||||| || Sbjct 14732 GCCGTACCAGCGTGGTTCGCATCATCCAGCTTCGGAATACCCGT 14775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657558730716160