Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq36228 84.2 2e-11 >seq36228 Length=63081 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/170 (72%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 ||||||||||| || || | ||| ||||| || || ||||| |||||| | | |||| Sbjct 48321 GCGTGGAACCCGGCCGATCTAAGCGAGATGGCGCTGCCGCCGTGCCACATGTTCTGCCAA 48380 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| | || | | || | | | ||||| |||||| |||| ||||| ||||| ||| | Sbjct 48381 TTCTATGTGGCC--GACGGGGAG-CTGTCGTGCCAGATGTACCAGCGGTCGGCCGACATG 48437 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGCT 142739 ||||| || || ||||||||||| ||||| || || || | ||| Sbjct 48438 GGGCTCGGAGTGCCCTTCAACATTGCCAGCTACGCACTGCTTACGCGGCT 48487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500268169569280