Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq36271 562 3e-155 seq32329 244 1e-59 seq27878 244 1e-59 seq27877 244 1e-59 seq26115 244 1e-59 seq31850 93.3 5e-14 >seq36271 Length=16985 Score = 562 bits (622), Expect = 3e-155 Identities = 1142/1672 (68%), Gaps = 39/1672 (2%) Strand=Plus/Minus Query 19167 AGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACG 19226 |||| ||||| || ||| |||| ||| ||||||||||||||||| || || ||||||| Sbjct 2796 AGACGTACGAGCTCATGTCGCAGATGTTTTTCACGCACGCGACGCCCACGCTGTTCAACG 2737 Query 19227 CCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCA 19286 |||| ||| || ||| | ||| ||| ||||| |||| ||| |||| ||| | Sbjct 2736 CCGGCACGCCGCGTCCTCAGCTCTCGTCCTGCTTCCTCCTGGCCATGCAGGACGACTCGA 2677 Query 19287 TTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTA 19346 |||||||||| ||||| || || ||| |||| ||| |||||||||||| | || || | Sbjct 2676 TTGAGGGCATTTACGACACACTGAAGCAGTGTGCGTGTATCTCCAAGTGGGCGGGCGGGA 2617 Query 19347 TCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACA-CGA-ATCAATGGGACGAACG 19403 | || ||| ||| | |||||||| ||| | ||| | | || || ||||| | Sbjct 2616 TTGGCATCAGTATGCAC-AATATCCGTGCGAC--GAACAGCTACATTCGCGGCACGAATG 2560 Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463 | || |||| ||| |||| ||||| || || || ||| ||||||| | ||||| Sbjct 2559 GCTCCTCCAACGGCATCATCCCCATGCTGCGTGTGTTTAACGACACGGCACGATACGTGG 2500 Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523 ||||||| |||||||| |||||||| ||||||||||||||||| ||||| |||||||| | Sbjct 2499 ACCAGGGCGGCGGCAAGCGCAAGGGATCGTTCGCCATCTACCTGGAGCCCTGGCACGCCG 2440 Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583 |||| | || ||||| || ||||| |||||| || ||||| | ||| |||| Sbjct 2439 ACGTGTTCGAGTTCCTGGACCTGCGGAAGAACCACGGCAACGAGCTGCACCGCGCGCGCG 2380 Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643 |||| ||| || | ||| | ||||| || |||||| || || || |||| Sbjct 2379 ACCTGTTCTACGCGCTCTGGGTGCCGGATCTCTTCATGAAGCGCGTCGAAGCAGACGGCC 2320 Query 19644 AATGGCACCTGATGTGCCCGCACGA-ATGCCCTGGC-CTACCCGACGTCTACGGCGAGGC 19701 | ||| ||| | ||||| |||| |||| ||| ||| ||| || ||||| | Sbjct 2319 AGTGGAGCCTCTTCTGCCCCAACGAGGCGCCCGGGCTCTA--CGAGTGCTGGGGCGACGA 2262 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAGGTGGTCCGGG 19760 |||| | | ||||| | |||| |||| || | || ||| | || | Sbjct 2261 GTTCGAGGCCCTGTACGAAAAGTACGAGAAGGAGGGACGCGCTC-GCAAGACGATCAAAG 2203 Query 19761 CCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGT 19820 | | | | | ||| | | |||| | |||| | ||||| ||| |||| |||| Sbjct 2202 CGCAGCAGCTGTGGTTCTCCATCCTGGACGCCCAGATTGAGACGGGCGTGCCGTTCATGC 2143 Query 19821 GCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGT 19880 | ||||||| | || ||| |||||| || ||| ||||| | ||| ||||| ||| Sbjct 2142 TGTTCAAGGACTCGGCCAACCGCAAGTCGAACCAGCAGAACCTGGGCACGATCCGCTCGA 2083 Query 19881 CCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATC 19940 |||| |||| ||| |||||||| || ||| |||||| |||||||| || | Sbjct 2082 GCAACTTGTGCTGTGAGGTCATGGAGTACTCGTCGCCTGACGAGGTGGCCGTGTGCAACC 2023 Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGT---CAAGGCCTCCTCCTTCGACTTTGCCAAAT 19997 |||||||| || ||||| | ||||| ||| | | ||| ||| ||| Sbjct 2022 TGGCGTCCGTGGCGCTGCCCAAGTTCGTGGAAGAGGGCGGCGTGTTCAACTACCACAAGC 1963 Query 19998 TGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTT 20057 ||||||||||||| ||| || || || || ||||| ||||| || |||| | Sbjct 1962 TGTACGAGGTGACGAAGGTGGTGACCCGCAACCTGAACAAGGTCATTGACGTCAACTACT 1903 Query 20058 ACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCC 20117 |||| | || |||||||| ||| || ||||||||||| || ||| |||||||| | Sbjct 1902 ACCCCGTGGCGGAGGCGCGCACGTCCAACATGCGCCACCGCCCCGTCGGTATCGGCGTTC 1843 Query 20118 AGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCC-AAGGCGCGC 20176 |||| || ||||||| ||||| | | | | | | ||||| || ||| | || ||| Sbjct 1842 AGGGTCTCGCCGACGCGTTCATCCTCATGGACTACGCGTTCGA-GAGCCCGCAAGCCCGC 1784 Query 20177 GAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAA 20236 |||||||||||| ||||| ||| || | ||| |||| || | | ||| || Sbjct 1783 GAGCTCAACAAGAAGATCTTTGAGACCATTTACTACGCTTCCATGGAGACGTCGATGGAG 1724 Query 20237 CTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATC 20296 ||||||| ||| |||||||||||||||||| |||| || || || | |||| ||| Sbjct 1723 ATCGCCAAGGAGCTGGGCCCGTACGAGACGTTCCAGGGCTCTCCTGCCAGCAAGGGCATC 1664 Query 20297 CTCCAGCCGGACATGTGGGGCGTCA---CTGAGAATGAGTTTTGG---AGCGCC---CTC 20347 ||||| |||||||||||||||| |||| | | | ||| | ||| ||| Sbjct 1663 TTCCAGTTCGACATGTGGGGCGTCACCCCTGATTCGGGGCTGTGGGACTGGGCCACGCTC 1604 Query 20348 A---AGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCG 20404 | || | ||| ||| ||||| | ||||||||| ||||||||||||| |||||| Sbjct 1603 AAGCAGAACGTGATTAAG---CACGGCATCCGCAACTCGCTGCTCGTCGCGCCGATGCCG 1547 Query 20405 ACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAAC 20464 || |||||||| || || ||| |||| ||||||||| | |||||||||||||| ||||| Sbjct 1546 ACGGCCTCGACGGCTCAAATCCTGGGTAACAACGAGTCCATCGAGCCGTACACGTCCAAC 1487 Query 20465 ATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGC 20524 || ||| || || || || || |||||| ||| || |||||| ||||| | | Sbjct 1486 ATGTACAACCGCCGCGTGCTTGCGGGCGAGTTCACCATTGTGAACAAGTACCTGATGAGG 1427 Query 20525 GACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAGCCG 20582 || || || | | || ||| | || | | || | || || ||| | Sbjct 1426 GAGCTGATTGAGCTGGGCATCTGGACCCCGGAGGTGCGCAACCAGATCCTGAACGA--TG 1369 Query 20583 GCGGGAGCGTCCAG--GCATTGGAT-ATCCCCCAGAACCTCAAGGACATTTACAGGACCG 20639 |||| || ||| | ||| || || | || ||||||||| |||| ||| | Sbjct 1368 GCGGCTCGGTGCAGAAGGTCAAGATCATTCCGGACAAAATCAAGGACAAGTACAAGACGG 1309 Query 20640 TATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCG 20699 | ||||| ||| ||||||| | | ||| | ||||||| |||||||||||||| Sbjct 1308 TGTGGGAGATCAAGCAGAAGACGGTGTTGGACCTCTCGGCCGACCGCGGCGCCTACATTT 1249 Query 20700 ACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCA 20759 |||| |||||||||||| || ||| | | |||| | | ||||| | |||| Sbjct 1248 GCCAGAGCCAGTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAGCTCACATCCA 1189 Query 20760 TGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 |||| | |||| |||| | |||||||||||||||||||||||||| |||| Sbjct 1188 TGCACTTCTACGCCTGGAAAAAGGGGCTCAAGACGGGCATGTACTACATGCG 1137 Score = 506 bits (560), Expect = 2e-138 Identities = 1187/1759 (67%), Gaps = 53/1759 (3%) Strand=Plus/Plus Query 78193 CGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGAC 78252 |||| |||||||||||||||||||| ||||| ||||| |||| | |||||| | Sbjct 1137 CGCATGTAGTACATGCCCGTCTTGAGCCCCTTTTTCCAGGCGTAGAAGTGCATGGATGTG 1196 Query 78253 AGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTAC 78312 |||||| | |||||| | ||| |||||||||||||||| |||| ||||| Sbjct 1197 AGCTTGCTGATGGTCGGGTCGGCGATGTGGATGTTGAGCGACTGGCTCTGGCAAATGTAG 1256 Query 78313 GCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGG 78372 || ||||||||||||| | ||| | |||| ||| ||| |||||||| | ||| | Sbjct 1257 GCGCCGCGGTCGGCCGAGAGGTCCAACACCGTCTTCTGCTTGATCTCCCACACCGTCTTG 1316 Query 78373 TAAATGGCCTTCAGCTCTTCCTGGATG-TCCAGCGCTTGTACGCTCCCACCGGC--TCGC 78429 || || |||| | | ||| | ||| || | ||| | || || | | || ||| Sbjct 1317 TACTTGTCCTTGATTTTGTCCGGAATGATCTTGACCTTCT--GCACCGAGCCGCCATCGT 1374 Query 78430 ACA--ATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAA---GATCCCGGA 78484 || || | || | | ||| ||||| || | || || | |||| | Sbjct 1375 TCAGGATCTGGTTGCGCACCTCCGGGGTCCAGA---TGCCCAGCTCAATCAGCTCCCTCA 1431 Query 78485 CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGG 78544 ||||| | ||| | ||| ||||||||| || || ||||| ||| ||||||| Sbjct 1432 TCAGGTACTTGTTCACAATGGTGAACTCGCCCGCAAGCACGCGGCGGTTGTACATGTTGG 1491 Query 78545 TCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCA 78604 |||||||||||||| | ||||||||| |||| ||| || || |||||||| ||||||| Sbjct 1492 ACGTGTACGGCTCGATGGACTCGTTGTTACCCAGGATTTGAGCCGTCGAGGCCGTCGGCA 1551 Query 78605 TGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCT---TTAG-- 78659 | || ||||| || || || || || | || ||| || ||| || || | || Sbjct 1552 TCGGCGCGACGAGCAGCGAGTTGCGGATGCCGTGC---TTAATCACGTTCTGCTTGAGCG 1608 Query 78660 --GCC--GTCCCAAAATTC---ATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATAC 78712 ||| |||||| | | || | | || ||||||||||| || | ||| | Sbjct 1609 TGGCCCAGTCCCACAGCCCCGAATCAGGGGTGACGCCCCACATGTCGAACTGGAAGATGC 1668 Query 78713 CCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGC 78772 ||| | || || || |||| |||||||||||| | ||| ||||||||||| || | Sbjct 1669 CCTTGCTGGCAGGAGAGCCCTGGAACGTCTCGTACGGGCCCAGCTCCTTGGCGATCTC-C 1727 Query 78773 AT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGC 78831 || ||| || || |||| ||| | | ||| ||||| ||||||||||||||| Sbjct 1728 ATCGACGTCTCCATGGAAGCGTAGTAAATGGTCTCAAAGATCTTCTTGTTGAGCTCGCGG 1787 Query 78832 GCCTT-GGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGAC 78890 || | || ||| ||||||| | | | | ||||| | ||||| || ||||| || Sbjct 1788 GCTTGCGGGCTC-TCGAACGCGTAGTCCATGAGGATGAACGCGTCGGCGAGACCCTGAAC 1846 Query 78891 GCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAA 78950 ||||||| ||| || ||||||||||||||| | | || ||| || | ||||| | Sbjct 1847 GCCGATACCGACGGGGCGGTGGCGCATGTTGGACGTGCGCGCCTCCGCCACGGGGTAGTA 1906 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| || ||||| ||||||||| || || || ||| ||||||||||||| || Sbjct 1907 GTTGACGTCAATGACCTTGTTCAGGTTGCGGGTCACCACCTTCGTCACCTCGTACAGCTT 1966 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTG--ATGAAAGTCGGTAGGCACAGCGATGCCAGGTT 79067 | | | | || | | ||| | | ||| | || || || || |||||||| Sbjct 1967 GTGGTAGTTGAACACGCCGCCCTCTTCCACGAACTTGGGCAGCGCCACGGACGCCAGGTT 2026 Query 79068 GCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGA 79127 |||||||||| |||||| || || ||| |||| || |||||| || ||| Sbjct 2027 GCACACGGCCACCTCGTCAGGCGACGAGTACTCCATGACCTCACAGCACAAGTTGCTCGA 2086 Query 79128 CTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACAT 79187 ||| ||||| | ||||| |||||| ||| ||| | ||||||| | ||| Sbjct 2087 GCGGATCGTGCCCAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGAGTCCTTGAACAGCAT 2146 Query 79188 GTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCG 79247 | ||||| || ||||||| ||| | || | | | ||| | | | | || Sbjct 2147 GAACGGCACGCCCGTCTCAATCTGGGCGTCCAGGATGGAGAACCACAGCTGCTGCGCTTT 2206 Query 79248 GACAACCTTCTTGTAC---CGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGC 79304 || | ||||| || |||| ||||| | ||||| | | ||| | Sbjct 2207 GAT---CGTCTTGCGAGCGCGTCCCTCCTTCTCGTACTTTTCGTACAGGGCCTCGAACTC 2263 Query 79305 CTCCCCATAGACATCGGGCAGGCCCGGGCAC-TCGTGCGGGCACATCAGGTGCCAGTCCT 79363 || || || ||| || ||||||| | |||| ||||| | ||| ||| | Sbjct 2264 GTCGCCCCAGCACTCGTAGAG-CCCGGGCGCCTCGTTGGGGCAGAAGAGGCTCCACTGGC 2322 Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423 |||| || || || ||||||||| ||||| | ||| || || ||| ||||||| Sbjct 2323 CGTCTGCTTCGACGCGCTTCATGAAGAGATCCGGCACCCAGAGCGCGTAGAACAGGTCGC 2382 Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483 | || | ||||| ||| |||||| ||||| || || || || | | ||||| Sbjct 2383 GCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCCGCAGGTCCAGGAACTCGAACACGTCGG 2442 Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543 ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| | Sbjct 2443 CGTGCCAGGGCTCCAGGTAGATGGCGAACGATCCCTTGCGCTTGCCGCCGCCCTGGTCCA 2502 Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 |||| || ||||||| ||| || || || |||||||| | |||||||| || | ||| | Sbjct 2503 CGTATCGTGCCGTGTCGTTAAACACACGCAGCATGGGGATGATGCCGTTGGAGGAGCCAT 2562 Query 79604 TCGTCCCGTTGAT-TCG-TGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGC 79660 |||| ||| || | | ||| | |||| || || || | ||| ||| || || | Sbjct 2563 TCGTGCCGCGAATGTAGCTGTTC--GTCGCACGGATATT-GTGCATACTGATGCCAATCC 2619 Query 79661 CCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCG 79720 | || | |||||||||||| ||| |||| ||| || || ||||| |||||||| |||| Sbjct 2620 CGCCCGCCCACTTGGAGATACACGCACACTGCTTCAGTGTGTCGTAAATGCCCTCAATCG 2679 Query 79721 AGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGT 79780 ||||||||| ||| || | ||||||||| ||| | ||| || ||| ||||||| Sbjct 2680 AGTCGTCCTGCATGGCCAGGAGGAAGCAGGACGAGAGCTGAGGACGCGGCGTGCCGGCGT 2739 Query 79781 TGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCT 79840 |||| || || ||||||||||||||||| ||| | || ||| || |||||||||| | Sbjct 2740 TGAACAGCGTGGGCGTCGCGTGCGTGAAAAACATCTGCGACATGAGCTCGTACGTCTGCA 2799 Query 79841 TGACGCGCGGGAGGT-CGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG- 79898 || | | || |||| ||||||||| | ||| |||||||||| | | ||| Sbjct 2800 GAGCGGCCTCAACGTCCGTC-TTGTGGATGCCCAGCGCCACGCGCATGATCATCTGCTGC 2858 Query 79899 GGGCGTCTCGCCGACATTC 79917 ||||| ||| |||| ||| Sbjct 2859 GGGCG-CTCCACGACCTTC 2876 >seq32329 Length=12294 Score = 244 bits (270), Expect = 1e-59 Identities = 572/845 (68%), Gaps = 21/845 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | ||| |||||| | | ||||||| | || || | |||| Sbjct 10900 TGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTGGTGCACGACC 10959 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | ||||| |||| ||| | || |||||| || |||||||||| ||| ||||| | Sbjct 10960 TCAAGGACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGT 11019 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 |||||||||| || || || ||||||| || || | | ||||||||| || || | Sbjct 11020 TCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTTCAGTAACGAGG 11079 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | |||||||||| | ||||||| || ||| ||| || |||| |||||| Sbjct 11080 TGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCG-CCATCGAGAACATCCAC 11138 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||||||||| | ||||| | || ||||||| || ||||||| Sbjct 11139 TCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGAGAAGGACCAC 11198 Query 59892 CTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCA 59950 ||| | || ||||| |||||| |||| || || | | || || | ||||| | | Sbjct 11199 CTGCTGCGCGCCATCGAGACGATCCCGTGC-GTGACGAAGAAGGCCCAGTGGGCGCTCAA 11257 Query 59951 GTGGATGAGTCCTG-GAGCATCAT-TTGCAC--AACGTCTCATAGCTTTTGCATGCGTGG 60006 |||| || | || | | | || | || | | | || || | || || || |||| Sbjct 11258 GTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGG 11316 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | || ||||||||||| ||||||||||| | || |||||||| || ||||| || || | Sbjct 11317 AGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGCGCGGGCTGA 11376 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| || ||||| ||||| |||||||| || ||| ||||||||| | || ||| | Sbjct 11377 TGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACT 11436 Query 60127 TTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAG 60185 | || ||| | ||| || || | || || | || ||| | | ||| || Sbjct 11437 TCGC-GTGCCTGCTGTACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCCGCGTGCACCAG 11495 Query 60186 ATTGTTCAGT---GGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242 ||||| | || | | | |||| | ||| ||||||| | || |||| || Sbjct 11496 ATTGTGC-GTGACGCGGTGGTGA--TCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTG 11552 Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302 | || || || ||| || | ||| |||||||| ||||||| |||||||| Sbjct 11553 GAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGT 11612 Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCA--ATTTACGGCGTGAATAACCCTTTCGACTGGA 60360 || || | ||| || | | ||| || ||| ||| || ||||| |||||||||| Sbjct 11613 CTGCTGTACTCGTTGGGCG--TGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGA 11670 Query 60361 TGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATT 60420 |||| | |||||| || | || |||||||| ||||| |||||||| || || || || | Sbjct 11671 TGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTACT 11730 Query 60421 CAAAG 60425 | ||| Sbjct 11731 CGAAG 11735 >seq27878 Length=10574 Score = 244 bits (270), Expect = 1e-59 Identities = 572/845 (68%), Gaps = 21/845 (2%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | ||| |||||| | | ||||||| | || || | |||| Sbjct 1395 TGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTGGTGCACGACC 1336 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | ||||| |||| ||| | || |||||| || |||||||||| ||| ||||| | Sbjct 1335 TCAAGGACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGT 1276 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 |||||||||| || || || ||||||| || || | | ||||||||| || || | Sbjct 1275 TCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTTCAGTAACGAGG 1216 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | |||||||||| | ||||||| || ||| ||| || |||| |||||| Sbjct 1215 TGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCG-CCATCGAGAACATCCAC 1157 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||||||||| | ||||| | || ||||||| || ||||||| Sbjct 1156 TCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGAGAAGGACCAC 1097 Query 59892 CTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCA 59950 ||| | || ||||| |||||| |||| || || | | || || | ||||| | | Sbjct 1096 CTGCTGCGCGCCATCGAGACGATCCCGTGC-GTGACGAAGAAGGCCCAGTGGGCGCTCAA 1038 Query 59951 GTGGATGAGTCCTG-GAGCATCAT-TTGCAC--AACGTCTCATAGCTTTTGCATGCGTGG 60006 |||| || | || | | | || | || | | | || || | || || || |||| Sbjct 1037 GTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGG 979 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | || ||||||||||| ||||||||||| | || |||||||| || ||||| || || | Sbjct 978 AGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGCGCGGGCTGA 919 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| || ||||| ||||| |||||||| || ||| ||||||||| | || ||| | Sbjct 918 TGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACT 859 Query 60127 TTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAG 60185 | || ||| | ||| || || | || || | || ||| | | ||| || Sbjct 858 TCGC-GTGCCTGCTGTACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCCGCGTGCACCAG 800 Query 60186 ATTGTTCAGT---GGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242 ||||| | || | | | |||| | ||| ||||||| | || |||| || Sbjct 799 ATTGTGC-GTGACGCGGTGGTGA--TCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTG 743 Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302 | || || || ||| || | ||| |||||||| ||||||| |||||||| Sbjct 742 GAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGT 683 Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCA--ATTTACGGCGTGAATAACCCTTTCGACTGGA 60360 || || | ||| || | | ||| || ||| ||| || ||||| |||||||||| Sbjct 682 CTGCTGTACTCGTTGGGCG--TGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGA 625 Query 60361 TGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATT 60420 |||| | |||||| || | || |||||||| ||||| |||||||| || || || || | Sbjct 624 TGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTACT 565 Query 60421 CAAAG 60425 | ||| Sbjct 564 CGAAG 560 >seq27877 Length=1900 Score = 244 bits (270), Expect = 1e-59 Identities = 572/845 (68%), Gaps = 21/845 (2%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | ||| |||||| | | ||||||| | || || | |||| Sbjct 1395 TGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTGGTGCACGACC 1336 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | ||||| |||| ||| | || |||||| || |||||||||| ||| ||||| | Sbjct 1335 TCAAGGACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGT 1276 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 |||||||||| || || || ||||||| || || | | ||||||||| || || | Sbjct 1275 TCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTTCAGTAACGAGG 1216 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | |||||||||| | ||||||| || ||| ||| || |||| |||||| Sbjct 1215 TGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCG-CCATCGAGAACATCCAC 1157 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||||||||| | ||||| | || ||||||| || ||||||| Sbjct 1156 TCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGAGAAGGACCAC 1097 Query 59892 CTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCA 59950 ||| | || ||||| |||||| |||| || || | | || || | ||||| | | Sbjct 1096 CTGCTGCGCGCCATCGAGACGATCCCGTGC-GTGACGAAGAAGGCCCAGTGGGCGCTCAA 1038 Query 59951 GTGGATGAGTCCTG-GAGCATCAT-TTGCAC--AACGTCTCATAGCTTTTGCATGCGTGG 60006 |||| || | || | | | || | || | | | || || | || || || |||| Sbjct 1037 GTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGG 979 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | || ||||||||||| ||||||||||| | || |||||||| || ||||| || || | Sbjct 978 AGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGCGCGGGCTGA 919 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| || ||||| ||||| |||||||| || ||| ||||||||| | || ||| | Sbjct 918 TGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACT 859 Query 60127 TTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAG 60185 | || ||| | ||| || || | || || | || ||| | | ||| || Sbjct 858 TCGC-GTGCCTGCTGTACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCCGCGTGCACCAG 800 Query 60186 ATTGTTCAGT---GGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242 ||||| | || | | | |||| | ||| ||||||| | || |||| || Sbjct 799 ATTGTGC-GTGACGCGGTGGTGA--TCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTG 743 Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302 | || || || ||| || | ||| |||||||| ||||||| |||||||| Sbjct 742 GAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGT 683 Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCA--ATTTACGGCGTGAATAACCCTTTCGACTGGA 60360 || || | ||| || | | ||| || ||| ||| || ||||| |||||||||| Sbjct 682 CTGCTGTACTCGTTGGGCG--TGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGA 625 Query 60361 TGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATT 60420 |||| | |||||| || | || |||||||| ||||| |||||||| || || || || | Sbjct 624 TGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTACT 565 Query 60421 CAAAG 60425 | ||| Sbjct 564 CGAAG 560 >seq26115 Length=10575 Score = 244 bits (270), Expect = 1e-59 Identities = 572/845 (68%), Gaps = 21/845 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | ||| |||||| | | ||||||| | || || | |||| Sbjct 9181 TGTACAAGAAGGCGGAGGCTTCGTTCTGGACGGCCGAGGAGCTGGATCTGGTGCACGACC 9240 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | ||||| |||| ||| | || |||||| || |||||||||| ||| ||||| | Sbjct 9241 TCAAGGACTGGGCCAATTTGTCGGACAACGAGCGTCACTTCATCAAGACGGTGCTGGCGT 9300 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 |||||||||| || || || ||||||| || || | | ||||||||| || || | Sbjct 9301 TCTTCGCGGCCAGCGACGGCATTGTGAACGAGAACCTGGCCATGAACTTCAGTAACGAGG 9360 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | |||||||||| | ||||||| || ||| ||| || |||| |||||| Sbjct 9361 TGCAGGTGCCCGAGGCCCGCTGCTTCTACGGGTTCCAGATCG-CCATCGAGAACATCCAC 9419 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||||||||| | ||||| | || ||||||| || ||||||| Sbjct 9420 TCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACGCGATCGAGAAGGACCAC 9479 Query 59892 CTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCA 59950 ||| | || ||||| |||||| |||| || || | | || || | ||||| | | Sbjct 9480 CTGCTGCGCGCCATCGAGACGATCCCGTGC-GTGACGAAGAAGGCCCAGTGGGCGCTCAA 9538 Query 59951 GTGGATGAGTCCTG-GAGCATCAT-TTGCAC--AACGTCTCATAGCTTTTGCATGCGTGG 60006 |||| || | || | | | || | || | | | || || | || || || |||| Sbjct 9539 GTGG-TGCGACCCGCGCGTGTCGTCTTACCCGGAGCGCCTGCTGGCGTTCGCCGCTGTGG 9597 Query 60007 AAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCA 60066 | || ||||||||||| ||||||||||| | || |||||||| || ||||| || || | Sbjct 9598 AGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTGAAGAAGCGCGGGCTGA 9657 Query 60067 TGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGT 60126 |||| || ||||| ||||| |||||||| || ||| ||||||||| | || ||| | Sbjct 9658 TGCCCGGTCTGAGCTTCTCGAACGAGCTCATCAGCCGTGACGAGGGCATGCACACGGACT 9717 Query 60127 TTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAG 60185 | || ||| | ||| || || | || || | || ||| | | ||| || Sbjct 9718 TCGC-GTGCCTGCTGTACTCCAAGCTGGTGAACAAGCTGCCTGAGAGCCGCGTGCACCAG 9776 Query 60186 ATTGTTCAGT---GGGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGC 60242 ||||| | || | | | |||| | ||| ||||||| | || |||| || Sbjct 9777 ATTGTGC-GTGACGCGGTGGTGA--TCGAGCACGAGTTCGTGTGCGACTCGCTGCCGGTG 9833 Query 60243 AAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGC 60302 | || || || ||| || | ||| |||||||| ||||||| |||||||| Sbjct 9834 GAGCTGATCGGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGT 9893 Query 60303 CTCATGGCCCAGTTTGGAGAAGGACCA--ATTTACGGCGTGAATAACCCTTTCGACTGGA 60360 || || | ||| || | | ||| || ||| ||| || ||||| |||||||||| Sbjct 9894 CTGCTGTACTCGTTGGGCG--TGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGA 9951 Query 60361 TGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATT 60420 |||| | |||||| || | || |||||||| ||||| |||||||| || || || || | Sbjct 9952 TGGACATGATCTCGCTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTGGGCGAGTACT 10011 Query 60421 CAAAG 60425 | ||| Sbjct 10012 CGAAG 10016 >seq31850 Length=12102 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 159479 CGCTTCTGGGGGTCGCTCAGGACCTCATAGGCCTCCTGGACTTTCTTGAACTTCTCGGCG 159538 ||||||| |||||| || ||||| |||||| || || |||||||| ||| | | Sbjct 6188 CGCTTCTCCGGGTCGGAAAGCACCTCGTAGGCCACCGTGATGGTCTTGAACAGCTCCGGG 6247 Query 159539 TCACCGCCCTTGTCGGGGTGGTGCTCGCGGGCAAGTTTGCGGTACGCCTTTTTGATGTCG 159598 |||||||||||||| ||||||| || | || || || ||||||||||| ||||| ||| Sbjct 6248 TCACCGCCCTTGTCCGGGTGGTTCTTTAGTGCCAGCTTACGGTACGCCTTCTTGATCTCG 6307 Query 159599 G 159599 | Sbjct 6308 G 6308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548271600952320