Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq36271 284 1e-71 seq31996 129 6e-25 seq22780 125 8e-24 seq17832 125 8e-24 seq20447 91.5 2e-13 >seq36271 Length=16985 Score = 284 bits (314), Expect = 1e-71 Identities = 511/733 (70%), Gaps = 18/733 (2%) Strand=Plus/Minus Query 53244 AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACG 53303 |||||||||| | ||| || | || || |||||||| ||||| || |||||||||| Sbjct 2796 AGACGTACGAGCTCATGTCGCAGATGTTTTTCACGCACGCGACGCCCACGCTGTTCAACG 2737 Query 53304 CTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGA 53363 | || ||| | |||||| | ||| ||||||||| |||| ||| |||| ||||||| Sbjct 2736 CCGGCACGCCGCGTCCTCAGCTCTCGTCCTGCTTCCTCCTGGCCATGCAGGACGACTCGA 2677 Query 53364 TCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTA 53423 | || ||||| ||||| || || ||| ||||||| |||||||||||| |||| || | Sbjct 2676 TTGAGGGCATTTACGACACACTGAAGCAGTGTGCGTGTATCTCCAAGTGGGCGGGCGGGA 2617 Query 53424 TCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCA-CACCAATCAAGGGGACGAACGG 53481 | || ||| ||| | || ||||||||| || | || || || ||||| || Sbjct 2616 TTGGCATCAGTATGCAC-AATATCCGTGCGACGAACAGCTACATTCGCGGC-ACGAATGG 2559 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | || | || ||| | || ||||| || || || ||| ||||||| || ||||| | Sbjct 2558 CTCCTCCAACGGCATCATCCCCATGCTGCGTGTGTTTAACGACACGGCACGATACGTGGA 2499 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 |||||| || || ||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct 2498 CCAGGGCGGCGGCAAGCGCAAGGGATCGTTCGCCATCTACCTGGAGCCCTGGCACGCCGA 2439 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC---CG 53658 | | | ||||| || || ||||| ||| || || | | ||| ||| | || || Sbjct 2438 CGTGTTCGAGTTCCTGGACCTGCGGAAGAACCACGG---CAACGAGCTGCACCGCGCGCG 2382 Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG--GA 53715 |||||||| ||| || || ||| | ||||| ||||||||| || | | |||| || Sbjct 2381 CGACCTGTTCTAC-GCGCTCTGGGTGCCGGATCTCTTCATG--AAGCGCGTCGAAGCAGA 2325 Query 53716 CGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTG 53774 || ||||| ||| | ||||| |||||| ||||| ||| | | ||| || || | Sbjct 2324 CGGCCAGTGGAGCCTCTTCTGCCCCAACGAGGCGCCCGGGCTCTACGAGTG-CTGGGGCG 2266 Query 53775 AGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCA 53834 | ||||| | | |||| | ||||| |||| ||| |||| | ||| Sbjct 2265 ACGAGTTCGAGGCCCTGTACGAAAAGTACGAGAAGGAGGGACGCGCTCGCAAGACGATCA 2206 Query 53835 AGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACA 53894 | |||| || | ||| | ||||| | |||| | |||||||| ||||| || Sbjct 2205 AAGCGCAGCAGCTGTGGTTCTCCATCCTGGACGCCCAGATTGAGACGGGCGTGCCGTTCA 2146 Query 53895 TGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAAT 53954 || | |||||| |||| |||| ||| |||||| ||||| | ||| ||| | Sbjct 2145 TGCTGTTCAAGGACTCGGCCAACCGCAAGTCGAACCAGCAGAACCTGGGCACGATCCGCT 2086 Query 53955 CGAGCAACTTATG 53967 |||||||||| || Sbjct 2085 CGAGCAACTTGTG 2073 Score = 199 bits (220), Expect = 4e-46 Identities = 564/850 (66%), Gaps = 51/850 (6%) Strand=Plus/Minus Query 55104 ACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGA 55163 ||||||| |||| |||||| || ||||| || ||||||||| |||||| ||| | Sbjct 1968 ACAAGCTGTACGAGGTGACGAAGGTGGTGACCCGCAACCTGAACAAGGTCATTGACGTCA 1909 Query 55164 ATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCG 55223 | |||||||| | | |||||||| ||||||| | || ||||| ||| ||| |||| Sbjct 1908 ACTACTACCCCGTGGCGGAGGCGCGCACGTCCAACATGCGCCACCGCCCCGTCGGTATCG 1849 Query 55224 GTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCC-TTCGA---CTCGGAA 55279 | || ||||| | |||||| ||||| | | ||| | | | ||||| | || || Sbjct 1848 GCGTTCAGGGTCTCGCCGACGCGTTCATCCTCAT-GGACTACGCGTTCGAGAGCCCGCAA 1790 Query 55280 CCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGA 55338 || || || | ||| || | ||||| || | ||| |||| || | | ||| Sbjct 1789 ---GCCCGCGAGCTCAACAAGAAGATCTTTGAGAC-CATTTACTACGCTTCCATGGAGAC 1734 Query 55339 GTCGT--GTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCT 55396 |||| | ||| | | | |||| ||| | ||||||||||||| | || || || Sbjct 1733 GTCGATGGAGATC-GCCAAGGAGCT-GGGCCCGTACGAGACGTTCCAGGGCTCTCCTGCC 1676 Query 55397 GACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCTGACCCCA----------TGTT 55446 |||||| | |||||||||| | |||||| ||| ||||| ||| Sbjct 1675 AGCAAGGGCATCTTCCAGTTCGACATGTGGGGC--GTC--ACCCCTGATTCGGGGCTGTG 1620 Query 55447 TGAC------AAGTTGAAGCATGAC---ATTCACTTGTGGGGCCTACGCAACTCCCTGCT 55497 ||| | | | ||||| || ||| | | ||| | |||||||| ||||| Sbjct 1619 GGACTGGGCCACGCTCAAGCAGAACGTGATTAA---GCACGGCATCCGCAACTCGCTGCT 1563 Query 55498 CGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGA 55557 ||| ||||| ||||| || || ||||||||||| ||| |||| ||||||||| | |||| Sbjct 1562 CGTCGCGCCGATGCCGACGGCCTCGACGGCTCAAATCCTGGGTAACAACGAGTCCATCGA 1503 Query 55558 GCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAA 55617 |||||||||| ||||||| ||| ||||| || || || ||||| ||| | || Sbjct 1502 GCCGTACACGTCCAACATGTACAACCGCCGCGTGCTTGCGGGCGAGTTCACCATTGTGAA 1443 Query 55618 CAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGAT---CAAGAC 55674 |||| |||| | | ||| ||| || | || |||| |||| || | ||| | Sbjct 1442 CAAGTACCTGATGAGGGAGCTGATTGAGCTGGGCATCTGGACCCCGGAGGTGCGCAA-CC 1384 Query 55675 GGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAGATTCCTCTGCGTC----TCA 55730 ||| || || | || || || || ||||| | |||| || | | | ||| Sbjct 1383 AGATCCTGAACG--ATGGCGGCTCGGTGCAGAAGGTCAAGATCATTCCG-GACAAAATCA 1327 Query 55731 AGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTG 55790 |||| | ||| ||||||||||||||| ||||||| || | ||| | || | Sbjct 1326 AGGACAAGTACAAGACGGTGTGGGAGATCAAGCAGAAGACGGTGTTGGACCTCTCGGCCG 1267 Query 55791 ATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCAC 55850 | || || || ||||| |||| |||||| || |||||| ||| | | || | Sbjct 1266 ACCGCGGCGCCTACATTTGCCAGAGCCAGTCGCTCAACATCCACATCGCCGACCCGACCA 1207 Query 55851 TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGT 55910 | |||| | | || |||||||| |||| ||||| ||||| ||||||||||| |||| Sbjct 1206 TCAGCAAGCTCACATCCATGCACTTCTACGCCTGGAAAAAGGGGCTCAAGACGGGCATGT 1147 Query 55911 ACTATCTGCG 55920 |||| |||| Sbjct 1146 ACTACATGCG 1137 >seq31996 Length=23101 Score = 129 bits (142), Expect = 6e-25 Identities = 193/274 (70%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | ||||||||||||||| || || || || || || |||| Sbjct 11506 GCGTGAAGATGTACCGAGGGCTGGCCGCATCCTTTCCTCCCTGCAACCTGGTGCCGAACT 11565 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || || || | || || |||||||||| ||| || || | ||| |||| || | Sbjct 11566 GACCGGACGGGTACAGCAGCGGCAGGTTGTTGGAGCCTACAAAGTCCTGCGCCATGTTGA 11625 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 | ||||| |||| || || ||||| || |||||||| ||||| | ||| | Sbjct 11626 CGATCGTCGAGTGCAACGAAGCCTCGCCGTGATGGTACGCCGTGTGCTCGCTGCAGTAAC 11685 Query 152207 CCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 | || | ||| || ||||| | || ||||||| || ||| ||||||||| | | || Sbjct 11686 CTGCGAGCTGAGCGACCTTGACCTCGCTCGTCAGCTTGCGCTTCAGACAGGCGAAGAGCA 11745 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 |||||||||| || || | ||||| ||||| Sbjct 11746 CCTTGCGCTGCGAGATCTTGAGCCCGTCAACCAC 11779 Score = 113 bits (124), Expect = 5e-20 Identities = 178/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCA-GCAAGACGCGTACCGAATTG 117363 ||||| ||||| |||| ||| || |||||||| || || |||| | || ||||| || Sbjct 11508 GTGAAGATGTACCGAGGGCTGGCCGCATCCTTTCCTCCCTGCAACCTG-GTGCCGAACTG 11566 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || ||| | || || ||||||||||| ||| ||||||| || |||| |||||| Sbjct 11567 ACCGGACGGGTACAGCAGCGGCAGGTTGTTGGAGCCTACAAAGTCCTGCGCCATGTTGAC 11626 Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTC-CGCCACGTAGC 117482 ||||| || | ||||| || || || |||||||| ||||| | || ||| | Sbjct 11627 GATCGTCGAGTGCAACGAAGCCTCGCCGTGATGGTACGCCGTGTGCTCGCTGCA-GTAAC 11685 Query 117483 CCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCA 117542 | || |||||||| ||||| | || |||||| || ||| || ||||| | | || Sbjct 11686 CTGCGAGCTGAGCGACCTTGACCTCGCTCGTCAGCTTGCGCTTCAGACAGGCGAAGAGCA 11745 Query 117543 CCTTGCGCTG 117552 |||||||||| Sbjct 11746 CCTTGCGCTG 11755 >seq22780 Length=3860 Score = 125 bits (138), Expect = 8e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| ||||| || | ||||||||||||||| ||||| ||| ||||| || ||||| Sbjct 1925 GTGAAAATGTAACGAGCGCTGGCCGCATCCTTACCACCCATCAGGCGCGTACCGAACTGA 1866 Query 152089 CC-AGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || | ||| | || |||| || ||||||| || ||||| | ||| |||| |||||| Sbjct 1865 CCGATCGGGGAC-AGCAGGTGGATGTTGTTGCTTCCGACGAAGTCCTGCGCCATATTCAC 1807 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || |||||||| |||||| || ||||| || || |||| ||||| | | ||| || Sbjct 1806 GATACAGCCCTGCAAACTCGCCTCGCCGTGATGGTAAGCCGAATGCTCAGACACGTAGCC 1747 Query 152208 CGCCAACTGCGCCACCTTCATGTCCG 152233 || | ||| |||||||| | |||| Sbjct 1746 TGCAAGCTGTGCCACCTTGAGTTCCG 1721 Score = 123 bits (136), Expect = 3e-23 Identities = 242/354 (68%), Gaps = 3/354 (1%) Strand=Plus/Minus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| ||||||||||| || ||||||| || | ||| || | | || | ||| Sbjct 2080 AACCC-GTTCCGATACCGTCACTGCCATTCACGAGCACCATGGGGATAATCGGGATGTAC 2022 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 |||| ||||| | | | | || || || | ||||||||||| | ||||| | Sbjct 2021 CACTCGGGCTCAATCGACTGGCCATCTTCGTCCAGATACTTGAGCACGTCGTTGTCCAGC 1962 Query 117269 GGATCGAATATGTTCTTG-GTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 |||||| | | || | || | | | ||| |||||||||||||||| ||| || Sbjct 1961 GGATCGTAGA-GTCGACGCGTGAGCTGCTCCAGGTTGGTGAAAATGTAACGAGCGCTGGC 1903 Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 |||||||| ||||| || ||||||||||| || || |||| || |||| | Sbjct 1902 CGCATCCTTACCACCCATCAGGCGCGTACCGAACTGACCGATCGGGGACAGCAGGTGGAT 1843 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 ||||||| || || |||| || |||| || || || || || | |||||||| Sbjct 1842 GTTGTTGCTTCCGACGAAGTCCTGCGCCATATTCACGATACAGCCCTGCAAACTCGCCTC 1783 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTT 117501 || || || || |||| ||||| | ||||||||| || ||||| |||||||| Sbjct 1782 GCCGTGATGGTAAGCCGAATGCTCAGACACGTAGCCTGCAAGCTGTGCCACCTT 1729 >seq17832 Length=15358 Score = 125 bits (138), Expect = 8e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| ||||| || | ||||||||||||||| ||||| ||| ||||| || ||||| Sbjct 13558 GTGAAAATGTAACGAGCGCTGGCCGCATCCTTACCACCCATCAGGCGCGTACCGAACTGA 13617 Query 152089 CC-AGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || | ||| | || |||| || ||||||| || ||||| | ||| |||| |||||| Sbjct 13618 CCGATCGGGGAC-AGCAGGTGGATGTTGTTGCTTCCGACGAAGTCCTGCGCCATATTCAC 13676 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || |||||||| |||||| || ||||| || || |||| ||||| | | ||| || Sbjct 13677 GATACAGCCCTGCAAACTCGCCTCGCCGTGATGGTAAGCCGAATGCTCAGACACGTAGCC 13736 Query 152208 CGCCAACTGCGCCACCTTCATGTCCG 152233 || | ||| |||||||| | |||| Sbjct 13737 TGCAAGCTGTGCCACCTTGAGTTCCG 13762 Score = 123 bits (136), Expect = 3e-23 Identities = 242/354 (68%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| ||||||||||| || ||||||| || | ||| || | | || | ||| Sbjct 13403 AACCC-GTTCCGATACCGTCACTGCCATTCACGAGCACCATGGGGATAATCGGGATGTAC 13461 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 |||| ||||| | | | | || || || | ||||||||||| | ||||| | Sbjct 13462 CACTCGGGCTCAATCGACTGGCCATCTTCGTCCAGATACTTGAGCACGTCGTTGTCCAGC 13521 Query 117269 GGATCGAATATGTTCTTG-GTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 |||||| | | || | || | | | ||| |||||||||||||||| ||| || Sbjct 13522 GGATCGTAGA-GTCGACGCGTGAGCTGCTCCAGGTTGGTGAAAATGTAACGAGCGCTGGC 13580 Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 |||||||| ||||| || ||||||||||| || || |||| || |||| | Sbjct 13581 CGCATCCTTACCACCCATCAGGCGCGTACCGAACTGACCGATCGGGGACAGCAGGTGGAT 13640 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 ||||||| || || |||| || |||| || || || || || | |||||||| Sbjct 13641 GTTGTTGCTTCCGACGAAGTCCTGCGCCATATTCACGATACAGCCCTGCAAACTCGCCTC 13700 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTT 117501 || || || || |||| ||||| | ||||||||| || ||||| |||||||| Sbjct 13701 GCCGTGATGGTAAGCCGAATGCTCAGACACGTAGCCTGCAAGCTGTGCCACCTT 13754 >seq20447 Length=4630 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 158925 GTCACATGCGAAAACAATAAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAA 158984 |||| | |||| | | ||||||||| | ||||| ||||| || |||| ||| || Sbjct 1400 GTCAAACGCGAGCTCTACAAACTCGCGCACACTGTGGCATTCTCCCGTAGCAACCACGAA 1341 Query 158985 GTCCTCTGGACCGGGCTGTTGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTG 159044 |||||| || | || || |||||| ||||||| ||||||||| || | ||||| Sbjct 1340 GTCCTCGGGGGTGTCGTGCTGCAGCATGCGCCACATACACTCGACGTAGTCGCGTGCGTG 1281 Query 159045 ACCCCAGTCGCGCTTGGCATCCATGTTCCC 159074 ||||||||||||||||| || | ||| || Sbjct 1280 GCCCCAGTCGCGCTTGGCGTCGAGGTTGCC 1251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 124481 CGCCACCTCGATAAACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTC 124540 ||| | ||| | |||||| || | ||||| || ||||| ||| |||||| || || Sbjct 1394 CGCGAGCTCTACAAACTCGCGCACACTGTGGCATTCTCCCGTAGCAACCACGAAGTCCTC 1335 Query 124541 GGGAATCGACTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCA 124600 ||| | ||||||| ||| ||||||| | ||||||||| |||||| ||||| Sbjct 1334 GGGGGTGTCGTGCTGCAGCATGCGCCACATACACTCGACGTAGTCGCGTGCGTGGCCCCA 1275 Query 124601 GTCGCGCTTGGCATCCAGGTTTCC 124624 |||||||||||| || ||||| || Sbjct 1274 GTCGCGCTTGGCGTCGAGGTTGCC 1251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546963405094400