Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq36228 93.3 2e-14 >seq36228 Length=63081 Score = 93.3 bits (102), Expect = 2e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 52107 GATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTT 52166 || |||||| || | || ||||| | | | |||||||||||| || || || |||| Sbjct 48345 GAGATGGCGCTGCCGCCGTGCCACATGTTCTGCCAATTCTATGTGGCCGACGGGGAGCTG 48404 Query 52167 TCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226 |||||||| |||| |||||||| ||||||||| | || || || || ||||||||| Sbjct 48405 TCGTGCCAGATGTACCAGCGGTCGGCCGACATGGGGCTCGGAGTGCCCTTCAACATTGCC 48464 Query 52227 AGCTATTCCTTGCTGACGC 52245 ||||| | |||| |||| Sbjct 48465 AGCTACGCACTGCTTACGC 48483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190012639102080