Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq6666 96.9 2e-15 >seq6666 Length=19192 Score = 96.9 bits (106), Expect = 2e-15 Identities = 186/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGC-TCTGTGAGAGCATCAATGTGATT 97061 ||||| ||||| || | || |||||||||||||| |||| ||||| || | ||| || Sbjct 10592 AGTGTCGGGAATGGGCGCGGCATTCGCGTAAGCTGCTTCTG-GAGAGGCTCGACGTGGTT 10650 Query 97062 CACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGAC 97121 || ||| | ||| ||||| || | | ||| | ||| || ||||| || | || || Sbjct 10651 CAGATACACGTGGGCATCGCCAATAACGTGGACAAACTCACCAGGCTTCAACCCCGTCAC 10710 Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 || || | || | || | | | ||||| || || || || ||||| || ||||| Sbjct 10711 CTGCGCCACCAGTCGCGTCAGCAACGCGTAGCTGGCGATATTGAACGGCACGCCAAGTCC 10770 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 ||| || || || | || || | ||||||||| | || || ||| ||| || ||||| Sbjct 10771 CATGTCGGCCGAGCGCTGGTACATCTGACAGGACAACTCGCCGTCAGCCACGTAGAACTG 10830 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTT 97273 | || | || || || || | |||||||| Sbjct 10831 GCAGAACATGTGGCACGGCGGGAGCGCCATTT 10862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346749837766310