Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1187 93.3 3e-14 >seq1187 Length=10420 Score = 93.3 bits (102), Expect = 3e-14 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 33556 CGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGG 33614 ||||| || || || || |||| || ||||||||||||||| |||||| |||||||| Sbjct 5191 CGCAACATTCGTATCCCCCAGATTGGTGACAAGTTTGCATCGCGTCACGG-ACAGAAGGG 5249 Query 33615 CACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCC 33674 ||| || |||| |||| ||| ||||||||||||||||| || ||| | || Sbjct 5250 TACGATTGGTATGACGTACCGCCAAGAGGACATGCCGTTCACGGTGGAGGGCATCACGCC 5309 Query 33675 GGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 || | ||| | ||||| || || | || ||||| |||||||| Sbjct 5310 CGATATCGTCGTGAACCCTCACGCTATTCCGTCGCGTATGACGGT 5354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356198506871449