Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq4038 109 5e-19 >seq4038 Length=37899 Score = 109 bits (120), Expect = 5e-19 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 5340 CTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGAA 5399 |||| |||||||||||||||||||||||| ||| || |||| ||| ||||| Sbjct 17991 CTCGAGGATGAGCTGCGCCACGCGGTCGCCGCGCTTGACGGGGAAGTCCTC--GGCCGCG 18048 Query 5400 --GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCC 5457 |||||| || | ||| |||| ||| || ||| |||| | ||| | ||||| || ||| Sbjct 18049 TGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAGTCGGCGTCGATCACGCCGGCGCCC 18108 Query 5458 ACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCG 5517 || | ||| || || | |||||| ||||| | ||||||||||| ||||||||||| Sbjct 18109 GTGTCGATGAACTTCTTGAGCGCGAGGCCGGAGCGAGGCGCCACGCGCGCGTAGCAGCCG 18168 Query 5518 T 5518 | Sbjct 18169 T 18169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447765954275880