Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6666 286 4e-72 >seq6666 Length=19192 Score = 286 bits (316), Expect = 4e-72 Identities = 469/660 (71%), Gaps = 17/660 (3%) Strand=Plus/Plus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || ||||| |||||||| || || ||||| || || || | ||| ||||| || || Sbjct 10634 AGAGGCTCGACGTGGTTCAGATACACGTGGGCATCGCCAATAACGTGGACAAACTCACCA 10693 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTT 147038 ||||| | || ||||| || ||||||| || | || |||| || ||||||||| || || Sbjct 10694 GGCTTCAACCCCGTCACCTGCGCCACCA-GTCGCGTCAGCAACGCGTAGCTGGCGATATT 10752 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCC 147098 ||| || || || || |||||||| |||| | |||||||| ||| || || | ||| || Sbjct 10753 GAACGGCACGCCAAGTCCCATGTCGGCCGAGCGCTGGTACATCTGACAGGACAACTCGCC 10812 Query 147099 GTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 ||| |||||||| |||||||| | |||||||||||||| |||||||| | || || Sbjct 10813 GTCAGCCACGTAGAACTGGCAGAACATGTGGCACGGCGGGAGCGCCATTTCATTGAGATC 10872 Query 147159 CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTT 147217 ||| |||||||| ||||| | ||| | ||| | | | || |||||| | | || | Sbjct 10873 CGCCGGGTTCCACGCCGACAGCACGATCCGTCGGTCGGTC-GGGTTCGTGCGCAGCTTGT 10931 Query 147218 CGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACG 147276 |||||| | |||||||||||||||||| | |||| | | | ||| |||| | Sbjct 10932 GAATAACCTCCGCGAGCTGGTCCACGCCCTGGTTCGTGTAG-TCGGCATGCATGTCCGTG 10990 Query 147277 TACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTT 147336 ||| ||||||||||||||| ||||||||||||||| || || || || ||||| || Sbjct 10991 TACTTGGCCCCAAAGTGCCGCCACTGGAAGCCGTAGACAGGTCCGAGATCGCC--CACTT 11048 Query 147337 CTGTGCGA--GAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATG 147393 || |||| | || || | | | ||| |||| | || || | | ||||||||||| Sbjct 11049 CT-CGCGATTGCAGTCCACGACTGTCCAGATACTCCCGCGATCCATTGCCGTCCCAGATG 11107 Query 147394 CCCA-CTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAG 147452 | ||| | || | ||| | | |||| || | ||||||||| ||||| Sbjct 11108 TGGATGTCCTTCTGCTG-CAGCGTGTGCGCACTCGTGTCTCCACTGATGAACCACAGCAG 11166 Query 147453 CTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC---TGGTC 147509 ||||||| || || | ||| || || | |||||| || ||||| |||||| | ||| Sbjct 11167 CTCCTCCGCCACGCCGCGCCAGAACACGCGCTTGGTCGTGAGCAGTGGGAACACGTTGTC 11226 Query 147510 CCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTC 147569 ||| || ||| | ||| | ||||| || ||||||||||| || ||||||| ||| Sbjct 11227 CCTTAGACTGAACCGCATCTGCGCGCCAAAGACCGACAGCGTGCCTGTTCCCGTCCGGTC 11286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583429045831200