Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21 333 3e-86 seq2518 187 3e-42 seq1091 167 3e-36 seq3518 161 1e-34 seq544 134 2e-26 >seq21 Length=30282 Score = 333 bits (368), Expect = 3e-86 Identities = 555/786 (71%), Gaps = 26/786 (3%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 |||||||| || |||| |||||| |||| | | | || ||||||||||| Sbjct 2649 ATGCGCGTGGCGCTGGGCATCCACAAGAGCGACATTAAGGCCGCCCTCGAGACGTACGAG 2708 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| ||||||| || |||||||| || || || ||||| ||||| || ||| Sbjct 2709 CTCATGTCGCAAAAGTTTTTCACGCACGCGACCCCGACACTGTTTAACGCCGGCACGCCG 2768 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 | ||| || ||||| |||||||||| |||| ||| |||| ||||| || || |||||| Sbjct 2769 CGCCCACAACTGTCGTCCTGCTTCCTGTTGGCCATGCAGGACGACTCCATTGAGGGCATC 2828 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| ||||||||| |||| || ||||||||||||| | || |||||||| ||| | Sbjct 2829 TACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCCGGGGGTATCGGCATCAGC 2888 Query 53435 -TGCTCGAACGTCCGTGC---GAACGGCACACCAATCAAGGGGACGAACGGCGTCG-CCG 53489 ||| | ||| |||| || ||| || || ||| || ||||||||| ||| || Sbjct 2889 ATGCAC-AACATCCGCGCCACGAATAGCT-AC--ATCCGTGGCACGAACGGC-TCGTCCA 2943 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 |||| ||| | || ||||| ||||| |||||| |||||||||| ||||| ||||||| | Sbjct 2944 ATGGCATCATCCCCATGCTGCGCGTGTTCAACGACACGGCCCGCTACGTGGACCAGGGCG 3003 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | || ||||||||||| ||||||||||||||||| ||||| |||||||| ||| | | | Sbjct 3004 GAGGCAAGCGCAAGGGCTCGTTCGCCATCTACCTTGAGCCCTGGCACGCGGACGTGTTCG 3063 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC---CGTGACCTGT 53666 |||| || || ||||| ||| || || | | ||| ||| | || || ||||||| Sbjct 3064 AGTTCCTGGACCTGCGCAAGAACCACGG---CAACGAGCTGCACCGCGCGCGCGACCTGT 3120 Query 53667 T-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGG 53725 | ||| || |||||| | || || || |||||| | | ||||||| | | ||||| Sbjct 3121 TCTAC-GCGCTGTGGGTGCCCGATCTGTTCATGAAGAGGGTGGAGGCCAATGGCAAGTGG 3179 Query 53726 TACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTTAA 53784 ||| | ||||| || || ||| || ||| | | ||| || || ||||||||| Sbjct 3180 AGTCTGTTCTGCCCCAATGAAGCCCCTGGACTCTACGAGTG-CTGGGGCGAGGAGTTT-- 3236 Query 53785 CGAGA---TGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCG 53841 |||| | ||| | ||||| |||| ||| |||| | |||| |||| Sbjct 3237 -GAGACCCTTTATGAAAAGTACGAGAAGGAGGGACGCGCGCGCAAGACGATCAACGCGCA 3295 Query 53842 TGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTA 53901 || | ||| || ||||| | ||| | |||||||| ||| | |||| ||| Sbjct 3296 GCAGCTGTGGTTCGCCATCCTGGACGCGCAGATCGAGACGGGCGTGCCCTTCATGCTCTA 3355 Query 53902 CAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAA 53961 |||||| |||||||| |||| |||||| ||||| ||||| ||| || ||||| Sbjct 3356 CAAGGACGCGGTCAACCGGAAGTCGAACCAGCAGAACCTCGGCACGATCCGCTCCAGCAA 3415 Query 53962 CTTATG 53967 ||| || Sbjct 3416 CTTGTG 3421 Score = 206 bits (228), Expect = 3e-48 Identities = 539/811 (66%), Gaps = 31/811 (4%) Strand=Plus/Plus Query 55133 ACTCGGAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAG 55192 || || ||||||||| |||||||||| || |||||||| | | |||||||||| Sbjct 3552 ACGCGCAACCTGAACAAGGTCATCGACGTCAACTACTACCCCGTGGCCGAGGCGCGCAAG 3611 Query 55193 TCCAACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATG 55252 |||||| | || ||||| ||||||| |||||| || |||||| | || ||| ||||| Sbjct 3612 TCCAACATGCGCCACCGCCCCATCGGCATCGGCGTCCAGGGCCTCGCGGACGCGTTCATC 3671 Query 55253 ATGCTCGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AG 55311 | | || | ||||| || || || || | ||| || | |||||| || Sbjct 3672 CTCATGAACTTCGCGTTCGAGAGCGAGGAGGCCCGCGAGCTCAACAAGAAGATCTTCGAG 3731 Query 55312 TCGCATCTACTTTGCAGCGCTCGAGGAGTCGT--GTCATCTGGCTATGAGCGAGGGGACC 55369 | |||||||| ||| || | ||| ||| | ||| | | | |||| || | Sbjct 3732 AC-CATCTACTATGCGGCTATGGAGACGTCCATGGAGATC-GCCAAGGAGCTCGGCC-CG 3788 Query 55370 TACGAGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGC 55429 ||||||||||||| | ||||| || |||||| | |||||||||| | |||||| Sbjct 3789 TACGAGACGTTCCAGGGCTCGCCGGCCAGCAAGGGCATCTTCCAGTTCGACATGTGGGGC 3848 Query 55430 AAGTCTGACCCCAT-GTTTGACAAGT---------------TGAAGCATGACATTCACTT 55473 ||| ||||| | || | | || ||||| | || | | Sbjct 3849 --GTC--ACCCCGTCGTCGGGCCTGTGGAACTGGGCGGCGCTGAAGGAGAACGTGATCAA 3904 Query 55474 GTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGAT 55533 | ||||| |||||||| ||||| ||||| || ||||| || || |||||||| ||||| Sbjct 3905 GCACGGCCTGCGCAACTCGCTGCTGGTGGCCCCCATGCCCACTGCCTCGACGGCCCAGAT 3964 Query 55534 CATGGGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCT 55593 | | |||||||||||| | |||||||||||||| ||||||| ||| ||||| || Sbjct 3965 CCTCGGCAACAACGAGTCCATCGAGCCGTACACGTCCAACATGTACAACCGCCGCGTGCT 4024 Query 55594 AGCAGGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAA 55653 || || ||||| || |||||||| |||| | ||||| ||| || | || Sbjct 4025 GGCCGGCGAGTTCACGATCGTCAACAAGTACCTGATGAAGGAGCTGATCGAGCTGGGCAT 4084 Query 55654 GTGGA-ACCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TC- 55709 |||| |||| | | || | || || || | || ||||| ||||| || Sbjct 4085 CTGGACGCCCGACGTGCGCAAC-CAGATCCTGAATGACAGCGGCTCCGTGCAGAAGGTCA 4143 Query 55710 TGGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGA 55769 || || || | ||||||||| ||| ||||||||||||||| ||||||| Sbjct 4144 AGGCCATCCCGGACCACGTCAAGGAGAAGTACAAGACGGTGTGGGAGATCAAACAGAAGG 4203 Query 55770 GTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACA 55829 || | ||| || || || || || || ||||| |||| |||||| || |||| Sbjct 4204 CCGTGCTGGACCTGTCGGCCGACCGCGGCGCCTACATTTGCCAGAGCCAGTCGCTCAACA 4263 Query 55830 TCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889 || ||| | | || | | |||| | | ||||||||||| |||| ||||||| Sbjct 4264 TCCACATCGCCGACCCGACCATCAGCAAGCTCACATCGATGCACTTCTACGCCTGGAAGA 4323 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCG 55920 |||| |||||||| || |||||||| |||| Sbjct 4324 AGGGGCTCAAGACCGGCATGTACTACATGCG 4354 >seq2518 Length=24447 Score = 187 bits (206), Expect = 3e-42 Identities = 567/859 (66%), Gaps = 23/859 (3%) Strand=Plus/Minus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| || || ||||||||||| || | || |||||| | Sbjct 23786 CTTGGAGTACTCGCCCACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 23727 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCCAT 74575 |||||||||||||| |||||||| || ||| || | | | || | | || Sbjct 23726 GTCCATCCAGTCGAACGGGTTCTTCGCGTTGTAGATCTTCGACACGCCCAGCGAGTACAG 23667 Query 74576 GAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAG 74635 ||||| || ||||| || | ||||||||| ||| || | ||||||||| || Sbjct 23666 CAGGCGGTCGGCCACGAACTCAATGTACTGGCACATCAGCGACGAGTTCATGCCGATCAG 23607 Query 74636 TTTGCAC-GGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCAT--TGGAC 74692 | ||| ||||| | ||| | ||||| ||| | | | | ||| || || Sbjct 23606 CTC-CACAGGCAGGGAGTCGCGCACGAACTCGTGCTCGA--TGGTCACGGCATCGTGCAC 23550 Query 74693 AATCTTGTGAATG----TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAA-GCGTC 74747 |||| ||| | | ||| || || ||| | | ||| | ||||| | | | | Sbjct 23549 GATCTCGTGCACGCGGCTCTCCGGCAG----CTTGTTCACCAGCTTGGAGTACATGAGGC 23494 Query 74748 ACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGG 74807 | ||| || ||| ||| ||| ||||| | ||| |||| || ||||| || || Sbjct 23493 A-GGCGAAGTCCGTGTGCATGCCCTCATCGCGGCTGATCAGCTCGTTCGAGAAGCTCAGA 23435 Query 74808 CCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAG 74867 |||||||| || || |||||||| | ||| ||||||| ||||| || || ||||||| Sbjct 23434 CCAGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAG 23375 Query 74868 ATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG-CATCGGAAG-TCA 74925 ||||| || ||| || || || | || || | || | ||| | || | | | || Sbjct 23374 ATGCCCTCCACAGCAGCGAACGCCAGCAGACGCTCCGGGTACGACGACACCCGCGGGTCG 23315 Query 74926 T-CCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTG 74983 ||| | | ||||| | ||||| ||||| ||| |||| || || || ||| | Sbjct 23314 CACCACTTGAGCGCCCAGTGCGCTTTCTTCTTGAC-GCACGGGATCGTCTCAATGGCTCG 23256 Query 74984 GAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGT 75043 | ||| ||||||| | | ||||||| | | |||| || | || |||||| Sbjct 23255 CAGCAGGTGGTCCTTCTCCACCGCGTCCTTGATGTACGTGTCGATGAGCAGCGAGTACAC 23196 Query 75044 CTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAA 75102 |||||| || || |||| || ||| |||| | ||||||| | |||||||| | | Sbjct 23195 CTCCGAGTGGATGTTCTCGATGG-CGATCTGGAAACCGTAGAAGCAGCGCGCCTCCGGCA 23137 Query 75103 TCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162 ||| || || || || |||||| | | ||||| | ||||||||||| ||| | Sbjct 23136 CCTGCACCTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAG 23077 Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAAT 75222 |||| || ||||| || ||||| ||| ||||| | ||| || || || |||| | Sbjct 23076 CGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGCCCAGT 23017 Query 75223 CCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTT 75282 |||| ||||| | ||| || | ||||||| |||||||||| | | |||||| | Sbjct 23016 CCTTGAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGACGCCTCCGCCTTCT 22957 Query 75283 TGTACAAAGACCACAAGTC 75301 |||||| ||||| ||| Sbjct 22956 TGTACATCTGCCACACGTC 22938 >seq1091 Length=38999 Score = 167 bits (184), Expect = 3e-36 Identities = 248/352 (70%), Gaps = 0/352 (0%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || ||||||||||| | ||| || | || ||| ||| | Sbjct 11972 CCCGTTCCGATACCGTCGCTGCCGTTGACCAGCACCATTGGGATAACGGGGATGTACCAT 11913 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 |||||||| | | || || || || || ||| |||| |||| ||||| ||| Sbjct 11912 TCCGGCTCGATCGACTGTCCATCTTCGTCCAGGTACTTCAGAACGTCGTTGTCCAGAGGA 11853 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055 ||| | ||||| || || | | |||| ||||| ||||| || | |||||||||| Sbjct 11852 TCGTAGATCCGGCGCGTGAGCTGCTCCAAATTGGTGAAAATGTAACGAGCGCTGGCCGCA 11793 Query 152056 TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTG 152115 |||||||| || || ||||| || ||||| ||| |||| ||||||| | |||| Sbjct 11792 TCCTTGCCGCCCATCAAACGCGTACCGAACTGACCAATGGGCGACAGGAGGTGCACGTTG 11733 Query 152116 TTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCG 152175 ||| ||| ||||| | |||||||| ||||| || ||||||||||||||| || ||| Sbjct 11732 TTGCTGCCAACGAAGTCCTGAGCCATGTTCACGATACAGCCCTGCAGACTCGCCTCGCCG 11673 Query 152176 TGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCA 152227 ||||| || || | ||||||| | || || || | || |||||||||| Sbjct 11672 TGGTGGTATGCAGAGTGCTCCGACACATAACCAGCTAGTTGTGCCACCTTCA 11621 Score = 147 bits (162), Expect = 2e-30 Identities = 159/208 (76%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACC-AGCAAGACGCGTACCGAATTG 117363 |||||||||||||||| ||| || ||||||||||| || | ||| |||||||||||| || Sbjct 11819 GTGAAAATGTAACGAGCGCTGGCCGCATCCTTGCCGCCCATCAA-ACGCGTACCGAACTG 11761 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 ||| | ||| || ||||| || ||||||| ||| || |||| ||||||| ||| || Sbjct 11760 ACCAATGGGCGACAGGAGGTGCACGTTGTTGCTGCCAACGAAGTCCTGAGCCATGTTCAC 11701 Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCC 117483 || || || || |||||||| || ||||| || || | ||||||| ||| || || Sbjct 11700 GATACAGCCCTGCAGACTCGCCTCGCCGTGGTGGTATGCAGAGTGCTCCGACACATAACC 11641 Query 117484 CGCCAGCTGAGCCACCTTCATGTCTGAC 117511 || || || |||||||||| || ||| Sbjct 11640 AGCTAGTTGTGCCACCTTCAGCTCAGAC 11613 >seq3518 Length=62287 Score = 161 bits (178), Expect = 1e-34 Identities = 200/274 (73%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | || || ||||||||||| || ||| || || ||||||| Sbjct 12152 GCGTGAAGATGTAACGAGGACTAGCGGCATCCTTGCCTCCCTGCAGTCGAGTACCAAACT 12211 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || || || | || || ||||||||||| ||||||||||| ||| |||| |||| Sbjct 12212 GACCGGACGGGTACAGCAGCGGGAGGTTGTTGGAGCCCACGAAATCCTGCGCCATGTTCA 12271 Query 152147 CAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATC 152206 ||||||| ||||| || || |||||||| || ||||| || || ||| | Sbjct 12272 CAATCGTCGAGTGCAGCGAAGCCTCGCCGTGGTGGTAGGCCGTGTGTTCACTACAGTAAC 12331 Query 152207 CCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 | || | ||||||||||||| || |||| || || ||| ||||||||| | | || Sbjct 12332 CTGCAAGTTGCGCCACCTTCACCTCACTCGTTAGCTTGCGCTTCAGACAGGCGAAGAGCA 12391 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 |||||||||| || ||| | ||||| ||||| Sbjct 12392 CCTTGCGCTGTGAGATTTTGAGTCCGTCGACCAC 12425 Score = 113 bits (124), Expect = 5e-20 Identities = 275/409 (67%), Gaps = 16/409 (4%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || ||||||||||| || ||||| | || | || ||| | || ||| |||||| || Sbjct 12001 CCTGTACCGATACCCTCCGCGCCATTAACGAGCAACACCGGGATGATAGGCACGTAGTAC 12060 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGA-CGTACTTGAGCACCGCATTGTCACTCGG 117270 ||||||| || | | ||| ||||| || | |||| | || ||| | || | Sbjct 12061 ACAGGCTCAACTGGGAAACCATCGTC-GTCAGCGTAGCGCAACAGCGCGTCATCTTCCTC 12119 Query 117271 ATCGAATATGTTCTTGGTCCACG-GTGCT-----AGGCGAGTGAAAATGTAACGAGAGCT 117324 | ||| | | || | || ||||| || | ||||| |||||||||| || Sbjct 12120 AGGGAACA----CCAGG--CGCGTGTGCTTCTGAAGCAGCGTGAAGATGTAACGAGGACT 12173 Query 117325 TGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTT 117384 || ||||||||||| || || || ||||| || || || ||| | || || Sbjct 12174 AGCGGCATCCTTGCCTCCCTGCAGTCGAGTACCAAACTGACCGGACGGGTACAGCAGCGG 12233 Query 117385 CAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGC 117444 |||||||||| |||||| || | || |||| ||| |||||||| || || || Sbjct 12234 GAGGTTGTTGGAGCCCACGAAATCCTGCGCCATGTTCACAATCGTCGAGTGCAGCGAAGC 12293 Query 117445 CTCACCATGGTGATACGCCGTCTGCTC-CGCCACGTAGCCCGCCAGCTGAGCCACCTTCA 117503 ||| || ||||| || ||||| || || | || ||| || || || || |||||||||| Sbjct 12294 CTCGCCGTGGTGGTAGGCCGTGTGTTCACTACA-GTAACCTGCAAGTTGCGCCACCTTCA 12352 Query 117504 TGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTG 117552 || ||| || || ||| || ||||| | | |||||||||||| Sbjct 12353 CCTCACTCGTTAGCTTGCGCTTCAGACAGGCGAAGAGCACCTTGCGCTG 12401 >seq544 Length=17931 Score = 134 bits (148), Expect = 2e-26 Identities = 535/824 (65%), Gaps = 25/824 (3%) Strand=Plus/Plus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| || || ||||||||||| || | || |||||| | Sbjct 6721 CTTCGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 6780 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTT---CTCCCCAAACTGTGC 74572 |||||||||||||| |||||||| | ||| | |||| | | || | | Sbjct 6781 GTCCATCCAGTCGAAGGGGTTCTTGACGTTGTAGA---GCTTGGGCACGCCCAGCGAGTA 6837 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || ||||| || | |||||||| ||| || | ||||||||| Sbjct 6838 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGTCGAGTTCATGCCGAT 6897 Query 74633 GAGTTTGCACGG-CAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGA 74691 ||| | ||||| ||| | ||| | ||||| ||| | | ||| ||| Sbjct 6898 GAGCTC-CACGGGCAGCGAGTCGCACACGAACTCGTGCTCGATGGTGACGGCCTCACGGA 6956 Query 74692 CAATCTTGTGAATG----TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAA-GCGT 74746 | |||| ||| | | ||| ||||| | || | ||| | ||||| | | | Sbjct 6957 CGATCTCGTGCACGCGGCTCTCGGGAAGTT---TGTTGAC-CAGCTTGGAGTACATGAGG 7012 Query 74747 CACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAG 74806 |||| | || ||| ||| ||| || || | ||| || | || || || || || Sbjct 7013 CACG-CGAAGTCCGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGCTCAG 7071 Query 74807 GCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAA 74866 ||| ||||| || || |||||||| | ||| ||||||| |||||||| || |||||| Sbjct 7072 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCCGAGAAGAA 7131 Query 74867 GATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG-CATCGGAAG-TC 74924 ||||||||| || || || || | || || | || | ||| | || | | | || Sbjct 7132 GATGCCTTCAACCGCAGCGAACGCCAGCAGACGCTCCGGGTACGACGACACCCGCGGGTC 7191 Query 74925 AT-CCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTT 74982 ||| | | ||||| | || || ||||| ||| |||| || || || || Sbjct 7192 GCACCACTTGAGCGCCCAGTGCGCCTTCTTCTTGAC-GCACGGGATCGTCTCAATAGCGC 7250 Query 74983 GGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 | || ||| |||||| | |||||||| | | |||| || | || ||||| Sbjct 7251 GCAACAGGTGGTTCTTCTCCATCGTATCCTTGATGTACGTGTCGATGAGCAGCGAGTAGA 7310 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 ||| | || || |||| || ||| |||| | ||||||| | |||||||| | Sbjct 7311 CCTCGGCGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGC 7369 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 | ||| || || || || |||||| | | ||||| | ||||||||||| || Sbjct 7370 ACCTGCACTTCGTTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTCGCC 7429 Query 75162 GCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAA 75221 ||||| || ||||| || ||||| ||| ||||| | ||| || || || | ||| Sbjct 7430 GCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGCTTCTGCCAG 7489 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || |||||||| | ||| || | ||||||| |||||||||| Sbjct 7490 TCGTTCAGGTCGTGCACCAGGTCCAACTCCTCGGCCGTCCAGAA 7533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547160710663400