Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq6666 89.7 3e-13 >seq6666 Length=19192 Score = 89.7 bits (98), Expect = 3e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 1160 CGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCG 1219 || |||| |||| | || || |||||| | || |||| || ||||| || | ||| Sbjct 10905 CGACGGATCGTGCTGTCGGCGTGGAACCCGGCGGATCTCAATGAAATGGCGCTCCCGCCG 10846 Query 1220 TGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTG-CAGGTCTACCA 1278 |||||||| | | |||| | ||||| | |||||| | | || ||| ||| | ||||| Sbjct 10845 TGCCACATGTTCTGCCAGTTCTACGTGGCTGACGGCGAGTTGTC-CTGTCAGATGTACCA 10787 Query 1279 GCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGC 1338 |||| || |||||| || || |||||||||||||||||| |||||| | || | Sbjct 10786 GCGCTCGGCCGACATGGGACTTGGCGTGCCGTTCAATATCGCCAGCTACGCGTTGCTGAC 10727 Query 1339 GCACATGTTCGCGCAG 1354 || || | |||||| Sbjct 10726 GCGACTGGTGGCGCAG 10711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296102027652783