Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1255 93.3 8e-14 >seq1255 Length=9666 Score = 93.3 bits (102), Expect = 8e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 93538 CCCAGTTTTATGAGCTCTCTAATCACATATTCGTTCACCA-CTTGGAATGATCCTGAAAG 93596 ||||| | || ||||| || |||| || | |||||| | | || | | | || | ||| Sbjct 1800 CCCAGCTCGATCAGCTCCCTCATCAGGTACTTGTTCACGATCGTGAACTCA-CCGGCAAG 1858 Query 93597 TACATTACGATTATACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGAT 93656 ||| ||||| |||||||| ||||| | ||||| | ||| ||| |||||||||||| Sbjct 1859 CACACGGCGATTGTACATGTTCGACGTGTACGGCTCGATGGACTCATTGTTGCCCAGGAT 1918 Query 93657 CTGTGCAGTGGATGCAGTAGGCATGGGAGCAAC 93689 ||| ||||| || || ||||||||||| || || Sbjct 1919 CTGAGCAGTAGAAGCCGTAGGCATGGGGGCCAC 1951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989530481751055