Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq898 212 1e-49 seq572 190 4e-43 seq150 183 6e-41 seq467 158 2e-33 seq515 123 5e-23 seq2621 116 7e-21 seq404 100 5e-16 seq368 91.5 3e-13 seq1255 87.8 3e-12 >seq898 Length=32307 Score = 212 bits (234), Expect = 1e-49 Identities = 586/886 (66%), Gaps = 22/886 (2%) Strand=Plus/Minus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 ||||| || || |||||| || || | |||||||||||||| |||||||| ||| Sbjct 19519 ACGCCAGCTTTGGAGTACTCGCCCACACGCCTCTCGAAGAAGTTGGTCTTGCCCTGGAGC 19460 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || || | ||||| |||| || ||||||| | || | ||||| ||| || Sbjct 19459 GAGATCATGTCCATCCAGTCGAATGGGTTCTTGACGTTGTAGATCTTGGACACACCCAGC 19400 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 | | | |||||||||||||||||||||||||||| ||| || |||||||||| Sbjct 19399 GAGTACAGCAGACGGTCAGCCACGAACTCGATGTACTGGCACATGAGCGTCGAGTTCATG 19340 Query 10119 CCAATCATGCGGCAG-GGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 || |||| || || |||| | |||||| | ||| || | || | || || || Sbjct 19339 CCGATCA-GCTCCACCGGGAGCGAGTCGCAGACGAACTCGTGCTCAATCTTCACAGCGTC 19281 Query 10178 CTCGACGATGCTCTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGG 10235 ||||| ||| | | || || || |||||||||| | ||||| || |||| | Sbjct 19280 GCGCACGAT-CTCGTGGACTCGGCTCTCCGG-CAGCTTGTTCACCAGCTTGGAGTACATG 19223 Query 10236 AGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCC 10295 || | | || | | ||| | |||||||||||| ||||| | |||||| || || | Sbjct 19222 AGGCATGCGAAATCCGTGTGCATGCCCTCGTCGCGACTGATCATCTCGTTCGAGAAGCTG 19163 Query 10296 AGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAAC 10355 || || |||||||| || || || |||||||| | | ||| || || || ||||| Sbjct 19162 AGCCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGACCGAGCAAAAGGAGCCCGAGAA- 19104 Query 10356 AGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGCG 10413 ||||| |||||||| | | | || | || ||||| | | |||| | |||| Sbjct 19103 -GAAGATGCCCTCCACCGAGGCAAACGCCAGCAGACGCTCCGGGTAGGACGACACACGCG 19045 Query 10414 AAAAGTATTTC--GAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAG 10470 | | | ||| ||||| || ||||| ||| |||||||| ||||||| Sbjct 19044 GGTCGCACCACTTGAGTGCCCAGTTGGCTTTCTTCTGGACGCACGGGATCGTTTCGATAG 18985 Query 10471 CCTCGAAGAGCTTGTTACGCTC---GGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGG 10527 | | ||| | ||| ||| ||| ||||| || | |||| |||||| | Sbjct 18984 CACACAGGAGGTGGTTCTTCTCCACGGT---GTCCTTGATGTACGTGTCAATGAGCAGCG 18928 Query 10528 AGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCG 10587 |||| ||| ||||| | |||| || |||| || ||||||| || ||| Sbjct 18927 AGTAGACCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGAGCCT 18868 Query 10588 AGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGC 10647 ||| | ||||| | | ||||| || ||| ||||| | || ||||| || | Sbjct 18867 CGGGCACTTGCACTTCGTTGCTGAAGTTCATGGCCAGATTCTCATTGACGATGCCGTCAC 18808 Query 10648 TGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTT 10707 || | || |||||| |||| | ||||||||||||||||||||| | || | || || Sbjct 18807 TGGCAGCGAAGAAGGCGAGCACGTGCTTGATGAAGTGGCGCTCGTTGTCCGTGAGCTTCG 18748 Query 10708 CACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAA 10767 | |||||| | || || || | || |||||| | |||||||| | || Sbjct 18747 C---CCAGTCGTTGAGGTCGTGCACCAGGTCGAGCTCCTCGGCCGTCCAGAAGGAAGCCT 18691 Query 10768 CGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||||||||||||||||||| | | |||| | | | |||||||||| Sbjct 18690 CGGCCTTCTTGTACATCTGCCACACGTCGTGCTCCTGGATGGGGAA 18645 >seq572 Length=24693 Score = 190 bits (210), Expect = 4e-43 Identities = 381/553 (69%), Gaps = 10/553 (2%) Strand=Plus/Minus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| |||||| ||| || ||||| || || || ||||| |||||||| || Sbjct 4274 CTGTAGCATGCGCCACATGCATTCCACGTAGTCGCGAGCGTGTCCCCAGTCGCGCTTGGC 4215 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCAC-GCGTGCAAGACCGC 268364 |||| ||| || | ||| ||||| |||| | || ||| | ||| | | | | | Sbjct 4214 ATCCAGGTTGCCCACGAAGAGGCACTTCT-CGACCCCAGCACGAATGCGCACCACAGCTC 4156 Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424 ||||||| || || || ||||| || || ||| | || ||||||||||| || | || Sbjct 4155 GAGTGATCTTGCGTGTGACGAAGGTTGGTCCGCGTCGTGGACTCTCGTGGTTAAACAAGA 4096 Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484 | |||||| || |||||| | || || || || | |||||| || |||| | || | Sbjct 4095 TCCCGTTGACAGCAAACATGTCGTAGGCTTCGCGATGGTTCACCACACTCCAAAAGGCGA 4036 Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTT-TGAGGG 268543 || ||| || || |||| || || || || ||||| |||| || || | || || Sbjct 4035 ACTGCTTCGCTACCCCGTAGGGTGACCGCGGGTGGAACAGCGT-GTCCTCGTCCTGCGGC 3977 Query 268544 ATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTT 268603 | || | ||||| ||| | | |||| || || |||||||||||| | || | | Sbjct 3976 GTAGCTTGCACTTTCCCATACAACTCGCTTGTAGACGCTTGGTAGAACCTCGTCGAGTGC 3917 Query 268604 TCGAGACCGCAGATTCGGATTGCCT--CGAGCAAACGAAGAGTTCCCATGCCATCCACGT 268661 || || || || | || | || | | || | ||||| | ||||| |||| |||| Sbjct 3916 TCCAGTCCACACGTGCGCAG-GCATGTCAAG-AGGCGAAGCGCTCCCAACGCATCGACGT 3859 Query 268662 CCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTAT 268721 |||| || || || | || |||||| || || | ||||||| | ||| |||||||| | Sbjct 3858 CCGCCGTGTATTCAGCCAGCTCGAAGGAGACTTTGACATGGGACATGGCCCCCAGGTTGT 3799 Query 268722 AAACCTCATCCGGTTTGACCTGCTGCACGATCTT-CACGAGGTTCGTTGAGTCGGTGAGG 268780 | || || ||||| || || ||||| || ||| ||||| | ||||| |||||| Sbjct 3798 ACACTTCGTCCGGCCGCACACGCGCCACGACCTGGCAC-AGGTTGGACGAGTCCGTGAGG 3740 Query 268781 TCTCCGTAGTGCA 268793 ||||||||||||| Sbjct 3739 TCTCCGTAGTGCA 3727 >seq150 Length=92316 Score = 183 bits (202), Expect = 6e-41 Identities = 581/887 (66%), Gaps = 24/887 (3%) Strand=Plus/Minus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 ||||||||||| |||||| || || |||||||||||||| |||||||| || Sbjct 91760 ACGCCCGCCTTGGAGTACTCGCCCACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGC 91701 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGG----GGTAACC 10054 || || | ||||| |||| || ||||||| |||| | ||| | | | | Sbjct 91700 GAGATCATGTCCATCCAGTCGAACGGGTTCTTGGCGTTGTAGATCTTAGACACGCCCAGC 91641 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 |||| | | | |||||| ||||||||||||||||| |||| ||| || ||||||| Sbjct 91640 GAGTACAGC----AGGCGGTCGGCCACGAACTCGATGTATTGGCACATGAGCCCCGAGTT 91585 Query 10115 CATGCCAATCATGCGGCAG-GGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 ||| || |||| | || |||| | ||||| | ||| || | || | | || | Sbjct 91584 CATACCGATCAA-CTCCACCGGGAGCGAGTCGCGCACGAACTCGTGCTCAATCACCACAG 91526 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGG-GACAGCTTGTTCTCGAGCTTCGAATAC 10232 | || || || ||| | | || | | ||||||||| ||||| || ||| Sbjct 91525 CGTCGCGCACAAT-CTCGTGCACGCGGCTTTCCGGCAGCTTGTTGATCAGCTTGGAGTAC 91467 Query 10233 AGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAA 10292 | ||| | || | ||| | ||||||||| |||||||||| ||| || || || Sbjct 91466 ATGAGGCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTCGAGAAG 91407 Query 10293 CCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAG 10352 | |||||||||||||| || || || |||||||| || | |||||| || || ||| Sbjct 91406 CTGAGACCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAAGGAGCCCGAG 91347 Query 10353 AACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGC 10410 | |||||| ||||||||| | |||| | || ||||| | | ||||| | | Sbjct 91346 A--AGAAGATCCCCTCCACGGCGGCAAAGGCCAGCAGACGCTCCGGGTAGGAGGACACAC 91289 Query 10411 GCGAAAAGTATTTC--GAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGA 10467 ||| | | | ||| ||||| || ||||| ||| ||||| ||||||| Sbjct 91288 GCGGGTCGCACCACCTGAGCGCCCAGTGAGCTTTCTTCGTGACGCACGGGATGGTCTCGA 91229 Query 10468 TAGCCTCGAAG-AGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGG 10526 | | | || || || | || |||| |||||| || | |||| |||||| Sbjct 91228 T-GGCACGCAGCAGGTGGTCCTTCTCGACACCGTCCTTGATGTACGTGTCAATGAGCAGC 91170 Query 10527 GAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCC 10586 ||||| ||| ||||| | |||| || |||| | ||||||| || ||| Sbjct 91169 GAGTAGACCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGAGCC 91110 Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCG 10646 || || ||||| | | ||||| || ||||||||| |||| || || ||| Sbjct 91109 TCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATACCGTCG 91050 Query 10647 CTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTT 10706 ||| | |||||||| | || | ||||||||||||||| ||||| | | | || || Sbjct 91049 CTGGCAGCAAAGAAAGCCAGCACGTGCTTGATGAAGTGACGCTCGTTGTTCGTGAGGTTC 90990 Query 10707 TCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCA 10766 | |||||| | || || | | || |||||| | |||||||| | ||| Sbjct 90989 GC---CCAGTCATTGAGGTCGTGCACCAAGTCGAGCTCCTCGGCCGTCCAGAAGGAGGCC 90933 Query 10767 ACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 | ||||||||||||||||| | | |||| | | | |||||||||| Sbjct 90932 TCCGCCTTCTTGTACATCTGCCACACGTCGTGCTCCTGGATGGGGAA 90886 >seq467 Length=26389 Score = 158 bits (174), Expect = 2e-33 Identities = 441/668 (66%), Gaps = 24/668 (4%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||||| ||| ||| ||||| |||||| |||||||| || Sbjct 13291 CGCCACTGGATGTACTGGTTGGCAGTCTCGTCGAGGTGAGACTCAATGTGGTGGAATGCG 13350 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || ||||| || | |||||| || ||||||||||| || | ||||| Sbjct 13351 TGCTGAGCGACGTAGGCGAAACGCATGGAAGGGTGCTTCCACACCTGACCACTGGTCGGC 13410 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | |||||| | || | ||| || ||||| |||||||| | | Sbjct 13411 TCCACCTCACCCGTCAGCATCTTGATCATAGTCGACTTACCGGCACCGTTGGGGCCCAGC 13470 Query 225161 ACGCCAATCCGGGATGACATTGC-AAC--CTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217 ||| | || ||| || | || || | |||| | |||| | | || ||| Sbjct 13471 ACGGCGATACGGCTCGAAAGCGCGCACGTCACCGAGATGTTGTTGATCGACGGCTTGGGG 13530 Query 225218 ----CCAGTT--TGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271 || | | ||||| | || || | ||| ||||||| ||||| Sbjct 13531 GTTCCCGGGTACTGGTACG---AG--CA-GTTCGTCAGACGAATGATGGGCTTACCCTTG 13584 Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC---C 225328 | ||| | | ||||| || ||||| |||||| ||| |||| ||| | Sbjct 13585 TTCTTGATATCGGCAAGGAAACCAGGCTCCGGGAACGTGAACT---TCACATTGTCCGAC 13641 Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCG 225388 | || |||||||| | ||||| || || ||||||| | || ||||| || Sbjct 13642 TCGAGCTCGTAGTACGCCTTGGCCTCAGGCTTCTGCTCCACGAACTCGGAGAGGTTGCCC 13701 Query 225389 AGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCA 225448 || || | ||||| || ||||||| |||| || | ||| || | ||| Sbjct 13702 TTGTAGATCTTCAGCTTACGG---GTCTCGTAGTGAATGATGTTGGTGCAGACCGTGTCG 13758 Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGC 225508 ||||||||||||||||| ||||| ||||| || | |||||||| ||||| | | |||| Sbjct 13759 AGGAAGCCAGAGTCGTGCGACACCATGATCGAGGTCACGTTCGGCAGGCTCGTCAGGTAA 13818 Query 225509 GTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGG 225568 | ||||| || ||||| |||| |||| |||||| || || || || || |||||| Sbjct 13819 TTCTCCAGCCAGGCGACGTTCTTGACATCCAAGTGGTTCGTCGGCTCATCAAGCAGCAGG 13878 Query 225569 ATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGAC 225628 ||||| || | || ||||| || | || ||| ||||| ||||| || || || Sbjct 13879 ATGTCGGCCTTCTGCAGCATGGCACGGGCCAGCTCCAGTTTCATCTTCCAACCACCCGAA 13938 Query 225629 AGGGAGCC 225636 || | ||| Sbjct 13939 AGAGTGCC 13946 Score = 114 bits (126), Expect = 2e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876 |||||||||||| ||||||||||| | || || || | |||||| ||| || || Sbjct 14124 GGGGAAGCCCTCGAGCTGGCCATTGGAGATGGCGCGCATCAGGGTCGACTTACCACAACC 14183 Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936 ||||||||| || |||||| | | || ||||||| | ||||| | | |||||| Sbjct 14184 ATTGGGACCGCACAGACCGTAACGGTGGCCACGCTTGAGGCGAAGGCGGGCGTTGTTCAG 14243 Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTC 225984 || ||| | ||||| |||||||| ||||||||||| | ||||||||| Sbjct 14244 CAGAATCATACCACCGTAGGCAAGCGAGAACTCGCAGTTGCACAGGTC 14291 Score = 113 bits (124), Expect = 8e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||| | ||| | || ||||| ||| ||| || | ||| || | ||| || ||||| Sbjct 12747 GTGGGTAATCATGACCACACCACCGTTGAACTCCTTGATGGCCGAAGCAAGGGCACCAAG 12806 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 ||| |||||||||||| ||||||| |||||||| || | | | ||| ||| | |||| Sbjct 12807 CGAGTCGCGGTCAAGGTAGTTCGTGGGCTCATCGAGCACCAGGATGTGCGGGTTCAGCCA 12866 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || || || || | ||| | ||||||||||||||| || || || || || || ||||| Sbjct 12867 CATAGCGGCGCCCAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATACGCGA 12926 Query 224629 GTGAGTCGTGAATTCGG 224645 ||| || ||| |||| Sbjct 12927 GTGGGTACCGAACTCGG 12943 >seq515 Length=44261 Score = 123 bits (136), Expect = 5e-23 Identities = 268/397 (68%), Gaps = 18/397 (5%) Strand=Plus/Minus Query 173082 ACGTCCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGG 173141 || |||| ||| ||| |||| ||||| || |||||||||| |||||| |||| |||| Sbjct 1598 ACATCCTCAAGATGGAGCAAATCGACACCATCCTGCACTTTGCAGCGCAGTCCCACGTGG 1539 Query 173142 ACAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTC 173201 ||||||||||||| |||||| | | || | || || |||| || || || | ||| | Sbjct 1538 ACAACTCGTTCGGCAACTCGATCGAGTTCAGCAAGACCAACATCCTGGGCACGCTCGTAC 1479 Query 173202 TCCTGGAATGCGCGAGGCTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACG 173261 | ||||| |||||| ||||| |||| || || ||||||| | ||| ||||||| Sbjct 1478 TGCTGGAGGCCGCGAGACTCTA---CGGTATCAAGAAGTTCATCCACGTGAGCACCGACG 1422 Query 173262 AAGTATACGGCGAGAGCAG-----TCTGGGCAAAAAAGAAGGCCTCGATGAACACTCGTC 173316 | || ||||| ||| | || || || | || | || || ||| || Sbjct 1421 AGGTGTACGGAGAGGGGAGGCCCTACTCCGCGCCCATGACG-----GAGGACCACGCG-- 1369 Query 173317 CCTCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGG-CACGTG 173375 || ||||| || ||||| || || || | || ||||| ||||| | ||| || | | Sbjct 1368 -CTGGAGCCCACGAACCCGTACGCGGCCACGAAAGCTGGCGCCGAGTTCTTGGTCAAGAG 1310 Query 173376 CATATCACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCC 173435 | ||| |||| || || |||| | ||| | | ||||| ||||| || | Sbjct 1309 -TTTCCACCGCTCGTTTGGCCTCCCGACCATCATCACGAGGAGTAACAACGTGTACGGAC 1251 Query 173436 CGCATCAGTTCCCCGAAAAAATGATCCCAAAATTTAT 173472 |||| |||| ||| || || | ||||| || ||||| Sbjct 1250 CGCACCAGTACCCGGAGAAGCTCATCCCCAAGTTTAT 1214 >seq2621 Length=2458 Score = 116 bits (128), Expect = 7e-21 Identities = 147/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 173076 TGGCGCACGTCCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCC 173135 ||| | || |||| ||| ||| | || ||||| || |||||||||| |||||| | | Sbjct 645 TGGGGTACATCCTCAAGACGGAGCAGATCGACACCATCCTGCACTTTGCAGCGCAGTCGC 704 Query 173136 ATGTGGACAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCC 173195 | ||||||||||||||||| |||||| | | || | || || |||| || || || | Sbjct 705 ACGTGGACAACTCGTTCGGCAACTCGATCGAGTTCAGCAAGACCAACATCCTGGGCACGC 764 Query 173196 ACGTTCTCCTGGAATGCGCGAGGCTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTA 173255 |||| || ||||| |||||||||||| ||| || || |||||||| | || | Sbjct 765 ACGTGCTGCTGGAGGCCGCGAGGCTCTA---CGGCATCAAGAGGTTCATCCA-GTCAGCA 820 Query 173256 CCGACGAAGTATACGGCGAG 173275 ||||||| || ||||| ||| Sbjct 821 CCGACGAGGTGTACGGAGAG 840 >seq404 Length=35855 Score = 100 bits (110), Expect = 5e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 224501 GCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGG 224560 ||||| |||| ||||||| ||| ||||||||||||||||||| | | | ||| ||| Sbjct 6412 GCGCCCAGCGCAGCGCGGTCCAGGTAGTTCGTCGGCTCATCCAGCACCAGCAAGTGCGGG 6353 Query 224561 CACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGG 224620 | | ||||| ||| || | | || |||||||||||||||||||| || || |||||| Sbjct 6352 CGGTTCCACATGGCAGCGGCGATAACAAGCTTCACCTTCTGACCGCCCGACAGACCGCGG 6293 Query 224621 ATC 224623 ||| Sbjct 6292 ATC 6290 >seq368 Length=32231 Score = 91.5 bits (100), Expect = 3e-13 Identities = 285/432 (66%), Gaps = 22/432 (5%) Strand=Plus/Plus Query 176109 CCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTTCAATCCGGTCGCCG 176168 |||||||| || || | ||||||| | || || ||||| | ||||||| || || Sbjct 14894 CCATTCACGAGCAGCATCGGGATGATAGGCACGTAGTAAACGGGTTCAACTGGGAATCCA 14953 Query 176169 TCATCCTCGAGGTAGTTCAGCAGACGC-TCGTCGGCCTTGTGGAAAAT--ATCCCGGGTG 176225 || || ||| |||| || ||| ||| || ||| | | | |||| | | | || ||| Sbjct 14954 TCGTCGTCGGCGTAGCGCAACAG-CGCATCATCGTCTTCGGGGAATACCAAGCGCGTGTG 15012 Query 176226 TTGGGGGACAGTTGTGTGAAGATATACCTAGC---AGACGCACTGTCCTTGCCTCCGTGA 176282 | | ||| |||||||| || | || || ||| ||||| ||||| || Sbjct 15013 CTTTTG--CAGCAACGTGAAGATGTAACGAGGGCTAGCGGCA---TCCTTACCTCCCTGC 15067 Query 176283 AGGCGGGAACCGAATTGTCCGCGAGGA---AGAAGCAAATTGATGTTATTCGAACCCACG 176339 | |||| ||| || || || ||| |||||| || ||| || || |||||| Sbjct 15068 AACCGGGTACCAAACTGACCTGACGGATACAGAAGCGG---GAGGTTGTTGGAGCCCACG 15124 Query 176340 TAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGCCG 176399 |||| || ||||| ||| || | || || || || || |||||||| ||| | Sbjct 15125 AAGTCCTGCGCCATATTGACAATAGTCGAGTGTAGCGATGCTTCACCGTGGTGGTAGGCT 15184 Query 176400 GCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTC--TTGTACGAGGTTGC 176457 | || |||||| ||| || || ||||| || || || | ||| | || ||| |||| Sbjct 15185 GTGTGCTCACTGCAGTAGCCCGCCAACTGTGCCACCTTCACTTCGCTCGT--GAGCTTGC 15242 Query 176458 GCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACG 176517 ||||||| || || || | || ||||| ||| ||||||||| ||||| || || | Sbjct 15243 GCTTCAAACACGCAAAAAGCACTTTACGCTGTGAGATCTTCAGACCGTCGACCACTGATG 15302 Query 176518 GAATGGAACGCT 176529 | | || |||| Sbjct 15303 GCAGCGATCGCT 15314 >seq1255 Length=9666 Score = 87.8 bits (96), Expect = 3e-12 Identities = 235/356 (66%), Gaps = 9/356 (3%) Strand=Plus/Plus Query 31956 AGACCGGGACACTCCTTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTC 32015 || |||||| || |||||| ||| || |||| | ||| || ||| || | |||| Sbjct 2673 AGTCCGGGAGCTTCGTTGGGGCAGAACAGGCTCCATTTGCCATTGGACTCGACCCTCTTC 2732 Query 32016 ATGAACAGGTCGTTCAGCCACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCA 32075 ||||| || ||| | ||| | |||||| ||||| | | || || || ||| | Sbjct 2733 ATGAAGAGATCGGGGACCCAGAGCGCGTAGAACAGGTCGCGCGCCCGGTGCAGCTCGTTG 2792 Query 32076 CCCTGGTTACGTCGGAGCAGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTAC 32135 || ||||| ||||| |||||| || | | ||||| ||| ||||| ||||| Sbjct 2793 CCGTGGTTCTTGCGGAGGTCCAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAG 2852 Query 32136 ACGGCGAAAGATCCCTTGCG---GCGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCG 32192 | |||||| || |||||||| || || ||||||| |||| || | ||||||| Sbjct 2853 ATGGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTA-GCGC--GCCGTGTCG 2909 Query 32193 T---ACACCTTCAGCATGGGTACGATGCCATCAGACTCGCCATTGGTCCCCTGGATCTTG 32249 | |||| ||||||||| | ||| |||| ||| ||| || || || |||| | | Sbjct 2910 TTGAACACGCGCAGCATGGGGATGATCCCATTGGACGAGCCGTTCGTGCCTCGGATGTAG 2969 Query 32250 GAACCACGGCCGCGAATGTCGCTCAGGTGCAGGCCGATGCCGCCACCAAACTTGGA 32305 | |||| |||| | || | | |||||||||||| | ||||||| Sbjct 2970 CTGTTGGTGGCGCGGATGTTGTGCATGCTGATGCCGATGCCGCCGGCCCACTTGGA 3025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921573772898120