Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq413 104 2e-17 seq41 86.0 5e-12 >seq413 Length=29709 Score = 104 bits (114), Expect = 2e-17 Identities = 170/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 108355 ACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCGTTCAGG 108414 ||||| |||| ||||| | ||| | ||| | ||||||||||| ||| | | Sbjct 10130 ACGGCGGGCGCGCATCGCCTCTGGTCGCACCGCGGCTACAAGGCCAAGCTGCCGCTGCGC 10189 Query 108415 GTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGGGTGCTC 108474 |||||||| ||| ||| |||| |||| || ||||||| ||||| || | Sbjct 10190 GTGTTCCTCATGCTGTGCAACTCGATGGCCTTCGAGGGCACCATCTTCGAGTGGTCGCGC 10249 Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 || ||| | || ||||||||| ||| ||||||||||||||||| |||||| | | | Sbjct 10250 GACCACCGCGTGCACCACAAGGGCTCGGACACGACGGCCGACCCGCACAACTCGGAGCGC 10309 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGATCTCG 108594 || ||| ||||||||| |||| ||| ||||| | |||| || ||||| | || Sbjct 10310 GGCCTCTTCTTCTCGCACATGGGCTGGATCATGGTACGCAAGCACAGGAACGTGCGCGCG 10369 Query 108595 GCCGG 108599 ||||| Sbjct 10370 GCCGG 10374 >seq41 Length=97554 Score = 86.0 bits (94), Expect = 5e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 108453 CACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGC 108512 ||||||| || ||| | ||| ||| | || |||||||||||||| ||||||| || Sbjct 83605 CACCATCTTCCACTGGTGCCGCGACCACCGCGTGCACCACAAGTACTCGGACACGAGCGC 83546 Query 108513 CGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGAC 108572 |||||| |||||| | | | || |||| ||| ||||| |||| ||||| | | | Sbjct 83545 CGACCCGCACAACTCGGGCCGCGGCTTCTTCTTCGCGCACATGGGCTGGCTGCTCGTCAA 83486 Query 108573 CAAGGACCCCGACGTGATCTCGGCCGG 108599 ||||||||| | ||| || |||||| Sbjct 83485 GAAGGACCCCAAGGTGGTCAAGGCCGG 83459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381753160294824