Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1255 149 6e-31 >seq1255 Length=9666 Score = 149 bits (164), Expect = 6e-31 Identities = 294/432 (68%), Gaps = 5/432 (1%) Strand=Plus/Minus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 || || ||| |||||||||| || | ||| | ||| |||||||| | |||| | Sbjct 3247 CAGCAGATGATCATGCGCGTGGCGCTGGGCATCCACAAGGGCGACATCCAGGCCGCGCTC 3188 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || ||||| | ||| || || || ||||||||||||| ||||| | ||| | Sbjct 3187 GAGACGTACGAGCTCATGAGCCAGAAGTTCTTCACGCACGCGACCCCCACGCTCTTCAAC 3128 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 ||||||||| | || ||| |||| ||||| || |||| || ||| || ||| | Sbjct 3127 GCCGGCACGCCGCGTCCGCAGCTGTCGTCGTGCTTCCTGCTGGCCATGCAGGACGACTCC 3068 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155 ||| || ||||| || || | | ||||||| || ||||| | | ||||||| Sbjct 3067 ATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCCAAGTGGGCCGGCGGC 3008 Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGA 123215 || ||| | | | ||||| || | | | | | ||| |||| || |||| |||| Sbjct 3007 ATCGGCATCAGCATGCACAACATCCGCGCCACCAACAGCTACATCCGAGGCACGAACGG- 2949 Query 123216 ATCG-CCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274 ||| || ||| || |||||||||| || | ||| || | | ||| |||| || Sbjct 2948 CTCGTCCAATGGGATCATCCCCATGCTGCGCGTGTTCAACGACACGGCGCGCTACGTGGA 2889 Query 123275 CCAG---GGCGGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331 |||| |||||||| ||||| ||| || | || ||||| || || |||||||||| || Sbjct 2888 CCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCCATCTACCTGGAGCCGTGGCACGCCGA 2829 Query 123332 TGTGTACGATTT 123343 |||| ||| || Sbjct 2828 CGTGTTCGAGTT 2817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451979351181160