Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1083 104 2e-16 >seq1083 Length=21326 Score = 104 bits (114), Expect = 2e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 |||||||||||||||||| | || || ||||||| || ||||| ||| | || |||||| Sbjct 10938 GGTAAAGAAGGTCGTATTCGTGGTAACCTGATGGGCAAGCGTGTGGATTTCTCGGCACGT 10879 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || || |||||| |||| ||||| |||| | || || |||| ||||| || | | ||| Sbjct 10878 ACGGTCATTACTGCTGACCCCAACATTGATATCGATCAAGTCGGTGTCCCCCGTTCGATT 10819 Query 668975 GCTAAAAATCTTACT 668989 || | || |||||| Sbjct 10818 GCGATGAACCTTACT 10804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780612940076026