Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq355 109 1e-18 seq1255 100 6e-16 >seq355 Length=43175 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| || | || || | || || ||||||||||| || |||||||| Sbjct 42317 TTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATC 42376 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || || ||||| || ||||| || ||||| |||||||| || ||| Sbjct 42377 AGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATTTTCTGCTTGACATTGTCA 42436 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 ||| |||| || ||||| || || || | ||||| || |||| || || || || Sbjct 42437 ATGCTGTCGGACGGCTCCACGTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAG 42496 Query 195133 ACTTGCAT 195140 | ||||| Sbjct 42497 ATCTGCAT 42504 >seq1255 Length=9666 Score = 100 bits (110), Expect = 6e-16 Identities = 186/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| ||||| ||||||| ||||||||||| || | |||||| | ||| Sbjct 2764 TTCTACGCGCTCTGGGTCCCCGATCTCTTCATGAAGAGGGTCGAGTCCAATGGCAAATGG 2705 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 ||||| ||||| ||||| ||||| || ||||| | || | || |||||| ||| Sbjct 2704 AGCCTGTTCTGCCCCAACGAAGCTCCCGGACTGTACGAGTGCTGGGGGGACGAGTTTGAG 2645 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 | || || || | ||||| | ||||| | ||| ||| | | || ||||| | Sbjct 2644 GCCCTCTACGAGAAGTACGAGACGGAGGGCCGGGCCCGCAAGACCATTAACGCCCAGCAG 2585 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 |||||| |||||| | |||||| ||||| ||| ||||||| || |||||| Sbjct 2584 CTGTGGTTCGCCATCCTGGACGCCCAGATCGAGACGGGGGTGCCCTTCATGCTGTACAAG 2525 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 || || | |||||| |||||| ||||| Sbjct 2524 GACGCGGCCAACCGCAAGTCCAACCAGCAGAAC 2492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109421597501507