Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq602 156 2e-33 >seq602 Length=26539 Score = 156 bits (172), Expect = 2e-33 Identities = 333/494 (67%), Gaps = 15/494 (3%) Strand=Plus/Minus Query 65889 GCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGAC 65948 |||| |||||| || |||||| || | ||| | | ||||||||||| || ||||| ||| Sbjct 14088 GCCTTCATCGATGCAGAGCACGCCATTGACGCCCACTACGCCAAGGCCCTGGGTGTCGAC 14029 Query 65949 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 66008 |||| ||| || ||||||||| | || || | || |||||||||| |||| Sbjct 14028 ATCGATGCCCTGTACGTCTCGCAGCCGGACTCCGGAGAAGAAGCTCTGGAGATCGCTGAC 13969 Query 66009 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 66068 ||| || || || | | || |||| || | ||| |||||||| || ||| Sbjct 13968 ACGCTCATCCGATCGGGAGCGGTGGATCTCGTGGTGCTGGACAGCGTGGCGGCTCTTGTG 13909 Query 66069 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 66128 ||||| || |||||||| || || || || ||| || | | ||||| ||||| ||| Sbjct 13908 CCGCGTGCAGAGCTCGAGGGTGAGATGGGAGACCAGCAGATTGCGCTGCAGGCGCGTCTC 13849 Query 66129 ATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAA---CACGCTGACG 66185 ||| || || |||||||| | ||||| | | |||| |||| ||| | | Sbjct 13848 ATGAGCCAAGCGCTGCGCAAGTTGACTGGATCGCTGTCCAAGTCCAACTGCACCATTA-- 13791 Query 66186 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAACGAG 66242 ||| | |||||| | ||| ||||| | || ||| || ||| |||| ||| Sbjct 13790 -TCTTCCTGAACCAGATCCGCCAGAAGGTGGG---CGTCATCTTCGGGTCCCCG---GAG 13738 Query 66243 ACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGC 66302 || ||||||| | ||| ||| | | |||||| || || ||| ||||| |||| ||| Sbjct 13737 GTGACATCGGGCGGTACGGCGTTGCGCTACTACGCGTCGGTGCGCCTGGATATCCGCCGC 13678 Query 66303 ATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTC 66362 | | || ||||| || || || |||||||||| || ||| ||||| | | Sbjct 13677 AAGACAGCCATCAAGGAGGGTGACCAGATTGTCGGCAACGAAACGGTGGTCAAGGTGGCC 13618 Query 66363 AAGAACAAGCTGGC 66376 |||||||||||||| Sbjct 13617 AAGAACAAGCTGGC 13604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243635465909340