Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq588 118 1e-21 >seq588 Length=22666 Score = 118 bits (130), Expect = 1e-21 Identities = 134/178 (75%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || ||||| ||||| || | ||| | || ||||| |||||||| ||||| ||||| Sbjct 21318 ATGTACGTGTCAATGAGCAGCGAGTAGACCTCCGAGTGGATGTTCTCGATGGCGATCTGG 21259 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCC--GCCA 16589 || || |||||||| |||||||||| | || ||||| | || |||| |||| Sbjct 21258 AAGCCGTAGAAGCAGCGAGCCTCCGGCACCTGCACTTCATTGCTGAA--GTTCATGGCCA 21201 Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 ||||||| |||||||||||||| || |||||||| || |||| | |||||| ||||| Sbjct 21200 GGTTCTCGTTCACGATACCGTCGCTGGCAGCAAAGAAAGCCAGCACGTGCTTGATGAA 21143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511379898706040