Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1233 93.3 8e-14 >seq1233 Length=11135 Score = 93.3 bits (102), Expect = 8e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 93538 CCCAGTTTTATGAGCTCTCTAATCACATATTCGTTCACCA-CTTGGAATGATCCTGAAAG 93596 ||||| | || ||||| || |||| || | |||||| | | || | | | || | ||| Sbjct 7957 CCCAGCTCGATCAGCTCCCTCATCAGGTACTTGTTCACGATCGTGAACTCA-CCGGCAAG 7899 Query 93597 TACATTACGATTATACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGAT 93656 ||| ||||| |||||||| ||||| | ||||| | ||| ||| |||||||||||| Sbjct 7898 CACACGGCGATTGTACATGTTCGACGTGTACGGCTCGATGGACTCATTGTTGCCCAGGAT 7839 Query 93657 CTGTGCAGTGGATGCAGTAGGCATGGGAGCAAC 93689 ||| ||||| || || ||||||||||| || || Sbjct 7838 CTGAGCAGTAGAAGCCGTAGGCATGGGGGCCAC 7806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989515571194135