Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1009 91.5 1e-13 >seq1009 Length=13826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 52894 GGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATG 52953 ||||||||| |||| | |||||| ||||||||||||| || || ||| | ||| || Sbjct 3508 GGCATGAACTCGACGCTCATGTGCCAGTACATCGAGTTCGTGGCTGACCGTCTGCTGTAC 3449 Query 52954 CAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATA 53013 ||| ||| | | || ||| || | ||||| || | ||| ||| || Sbjct 3448 TCGCTGGGTGTGTCCAAGATCTACAACGTCAAGAACCCATTCGACTGGATGGACATGATC 3389 Query 53014 TCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 |||||| ||||||| || ||||| |||||||| ||||||||||||||| Sbjct 3388 TCGCTCCAGGGCAAGACCAACTTCTTCGAGAGGCGTGTGGGCGAGTAC 3341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496030534282400