Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq2952 95.1 1e-14 >seq2952 Length=5175 Score = 95.1 bits (104), Expect = 1e-14 Identities = 225/334 (67%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 94088 CCCCAGAGCATGAACACCAGCTTGGGGCGGGTCTC-GCAGAGCCGCTGGACGACGGCGCG 94146 |||||||||| ||| || | |||| | | |||| || || | || |||||| Sbjct 4843 CCCCAGAGCAGGAAGACGACGTTGGAG-GCGTCTTTGCTGACCTTGGTGATGACGGCATC 4785 Query 94147 CACGAGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCGCCGCACGGTCAG 94206 | || | || |||||||| || ||||||| ||| | || |||||||| || || Sbjct 4784 CGTGAACTGCTCCCAGCCGCGCTTCTTGTGGGAGTTGGGCTCACCTCGCCGCACTGTGAG 4725 Query 94207 CGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGGGCGGG 94266 | |||||| || |||||||| || |||| |||| |||||||||||| | ||| Sbjct 4724 CACCGTGTTAAGGAGCAGCACACCCTGGCGGCTCCAGCAGGACAGGCAGCCGTGCGTGGG 4665 Query 94267 CGCGGGCAGCGTCGGGTACGTCGCCCGGA-CCGCCGCGAAGATGTTGGCCAGGCTCGGGG 94325 ||| ||| | |||||| | | || || ||||||||| |||||||||| Sbjct 4664 -GCGAGCAATGCAC---ACGTCGTTCATAGCCTCCTTGAAGATGTTCTTGAGGCTCGGGG 4609 Query 94326 GGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCGGCCCGTGGT 94385 | ||| || | | || || |||| |||||| || ||||| ||| ||||||| Sbjct 4608 GAGGCGGAACTTCATGACGCACCGAGAAGCTCAGCCCATGCGCCTGCTGCGGTCCGTGGT 4549 Query 94386 ACGGGTCCTGGCCGATGATGACCACCTTGACGTC 94419 ||||||| ||||| | || || || || | ||| Sbjct 4548 ACGGGTCTTGGCCCAGAATCACGACTTTCAGGTC 4515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458916238274520